CV885074

Overview
NameCV885074
Unique NameCV885074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP3AB_MOUSE (Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.941e-25
Identity = 39/105 (37.14%), Postives = 63/105 (60.00%), Query Frame = -1
Query:  233 RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLEL 547
            R   K+VE+ G  +PKG+ V +    +  D +++ EP++F+PERF    E      P  YLPFG GPR C+G +FA+  +KL+L  + +N+ F+   + + PL+L
Sbjct:  376 RVCKKDVELNGVYIPKGSTVMIPSYALHHDPQHWSEPEEFQPERFSK--ENKGSIDPYVYLPFGNGPRNCLGMRFALMNMKLALTKIMQNFSFQPCKETQIPLKL 478          

HSP 2 Score: 57.3806 bits (137), Expect = 2.941e-25
Identity = 39/118 (33.05%), Postives = 61/118 (51.69%), Query Frame = -2
Query:  559 RMKESKQGSK-----DLLSLIVKARELETE--SKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVS 891
            RMKES+  SK     D L L++ +     +  S    +   I+A +   + AG  TTS  LS  ++ +A HP+++ KL  EID   P +  PT  D   +  YLD V+ E +R+Y ++
Sbjct:  255 RMKESRLDSKQKHRVDFLQLMMNSHNNSKDKVSHKALSDMEITAQSIIFIFAGYETTSSTLSFTLHSLATHPDIQKKLQDEIDEALPNKAPPT-YDTVMEMEYLDMVLNETLRLYPIA 371          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP343_HUMAN (Cytochrome P450 3A43 OS=Homo sapiens GN=CYP3A43 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.438e-25
Identity = 44/120 (36.67%), Postives = 70/120 (58.33%), Query Frame = -1
Query:  230 HEDLSSIPISCRETA---KEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLELE 580
            +E L   P+  R T    K++EI G  +PKG  V + +  +  D K + EP+KF PERF    +++   +   Y+PFG GPR CIG +FA+  IKL++I   +N+ F+   + + PL+L+
Sbjct:  361 NETLRLFPVVSRVTRVCKKDIEINGVFIPKGLAVMVPIYALHHDPKYWTEPEKFCPERFSKKNKDSIDLY--RYIPFGAGPRNCIGMRFALTNIKLAVIRALQNFSFKPCKETQIPLKLD 478          

HSP 2 Score: 53.1434 bits (126), Expect = 8.438e-25
Identity = 37/117 (31.62%), Postives = 55/117 (47.01%), Query Frame = -2
Query:  562 KRMKESKQGSKD------LLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLV 894
            +RMKES+   K          +I      ET+S    +   + A +   + A   TTS  L  I+Y +A HP+V+ KL  EID   P +  P   D   +  YLD V+ E +R++ V
Sbjct:  254 ERMKESRLKDKQKHRVDFFQQMIDSQNSKETKSHKALSDLELVAQSIIIIFAAYDTTSTTLPFIMYELATHPDVQQKLQEEIDAVLPNK-APVTYDALVQMEYLDMVVNETLRLFPV 369          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP3AV_MESAU (Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CYP3A31 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.429e-24
Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = -1
Query:  233 HEDLSSIPISCR---ETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLEL 580
            +E L   PI  R      ++VE+ G  +PKG+ V + +  +  D + +PEP+KF+PERF    E      P  +LPFG GPR CIG +FA+  +KL+L  + +N+  +   + + P++L
Sbjct:  359 NETLRLYPIGSRLERVCKQDVEMDGVFVPKGSIVMVPVFALHYDPQYWPEPEKFRPERFSK--ENKGSIDPYIFLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSLQPCKETQIPMKL 475          

HSP 2 Score: 58.5362 bits (140), Expect = 1.429e-24
Identity = 36/115 (31.30%), Postives = 60/115 (52.17%), Query Frame = -2
Query:  568 LDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIY 912
            +D+    R+  +++   D L L++ + +   +S    +   I A +   + AG  TTS  LS  +YL+A HP+V+ KL  EID   P +  P + D   +  YLD V+ E +R+Y
Sbjct:  252 VDKTKENRLDYNQKHRVDFLQLMMNSHDNSKDSHKALSDMEIIAQSIIFIFAGYDTTSSTLSFALYLLATHPDVQKKLQEEIDIALPNKARP-SYDKVMEMEYLDMVLNETLRLY 365          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP3AA_MESAU (Lithocholate 6-beta-hydroxylase OS=Mesocricetus auratus GN=CYP3A10 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 6.940e-24
Identity = 42/111 (37.84%), Postives = 64/111 (57.66%), Query Frame = -1
Query:  215 RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLELEFGIIL 547
            R + K VEI G  +PKG  V +    + +D + +PEP++F+PERF    E      P  Y+PFG GPR CIG +FA+  +KL+++ + +N+  +     EN L+    IIL
Sbjct:  375 RISKKAVEINGLFIPKGITVMVPTYPLHRDPEYWPEPEEFRPERFSK--ENKGSIDPYVYMPFGNGPRNCIGMRFALLSMKLAVVSVLQNFTLQTCEQTENHLKFARQIIL 483          

HSP 2 Score: 52.373 bits (124), Expect = 6.940e-24
Identity = 31/112 (27.68%), Postives = 58/112 (51.79%), Query Frame = -2
Query:  559 RMKESKQGSKDLLSLIVKARELE-TESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVS 891
            R+  +++   D   L++  +  +  ES+   +   ++A     + AG  +TS ++  ++Y +A HP+V+ KL  EID   P +  P   D+     YLD VI E +R+Y ++
Sbjct:  260 RLHSNQKTRMDFFQLMMNTQNSKGKESQKALSDLEMAAQAIIFIFAGYESTSTSICLVLYELATHPDVQKKLHDEIDSALPNK-APVTYDVLMGMEYLDMVINEGLRLYPIA 370          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP4D1_DROSI (Cytochrome P450 4d1 OS=Drosophila simulans GN=Cyp4d1 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.588e-23
Identity = 47/120 (39.17%), Postives = 69/120 (57.50%), Query Frame = -1
Query:  206 SIPISCRETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLELEFGIILNFK 565
            S+P+  R+  ++ EI G  +P GT + ++   + +  + F EP+ FKPERFD     A++ +P AY+PF  GPR CIGQKFAM EIK  + ++ R+Y      D   P  L   +IL  K
Sbjct:  382 SVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNSFKPERFDV-VTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTK 500          

HSP 2 Score: 46.595 bits (109), Expect = 2.588e-23
Identity = 37/141 (26.24%), Postives = 64/141 (45.39%), Query Frame = -2
Query:  541 DEIVFKRMKE------SKQGSKD-----------LLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDG-FGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVVEK 909
            ++I+ +R +E      S++ SKD            L +++++   E    N+   + +    +E    G  TTS AL    Y +A HPE + K   EI    G  +  P + +L  +  Y+D  +KE +R+Y   PL+  K
Sbjct:  253 EKIIVQRREELIREGSSQESSKDDADVGAKRKMAFLDILLQSTVDERPLSNLDIREEVDTFMFE----GHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRK 389          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP4D1_DROME (Cytochrome P450 4d1 OS=Drosophila melanogaster GN=Cyp4d1 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 4.382e-23
Identity = 47/120 (39.17%), Postives = 69/120 (57.50%), Query Frame = -1
Query:  206 SIPISCRETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLELEFGIILNFK 565
            S+P+  R+  ++ EI G  +P GT + ++   + +  + F EP+ FKPERFD     A++ +P AY+PF  GPR CIGQKFAM EIK  + ++ R+Y      D   P  L   +IL  K
Sbjct:  382 SVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNSFKPERFDV-VTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTK 500          

HSP 2 Score: 45.8246 bits (107), Expect = 4.382e-23
Identity = 26/76 (34.21%), Postives = 38/76 (50.00%), Query Frame = -2
Query:  541 LLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDG-FGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVVEK 765
            +  G  TTS AL    Y +A HPE + K   EI    G  +  P + +L  +  Y+D  +KE +R+Y   PL+  K
Sbjct:  314 MFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRK 389          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP4S3_DROME (Probable cytochrome P450 4s3 OS=Drosophila melanogaster GN=Cyp4s3 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.385e-23
Identity = 45/104 (43.27%), Postives = 64/104 (61.54%), Query Frame = -1
Query:  254 SIPISCRETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPD 565
            S+P   R+  +++E+G   +PKG  +   + ++ +D KNFP+P++F P+RF  N    KQ HP A+  F  GPR CIGQKFAM E+K SL  L R+Y F    D
Sbjct:  364 SVPFFSRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFLVN---EKQMHPFAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRFLPDKD 464          

HSP 2 Score: 38.891 bits (89), Expect = 4.385e-23
Identity = 23/75 (30.67%), Postives = 37/75 (49.33%), Query Frame = -2
Query:  541 LLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVVEK 765
            +  G  TTS A++  + L++ +P+V+ +   E      RE        ++  PYL+ VIKE +RIY   P    K
Sbjct:  305 MFEGHDTTSSAIAFALSLLSKNPDVQQRAFEEASELEGRE--------KESMPYLEAVIKETLRIYPSVPFFSRK 371          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP4D2_DROME (Cytochrome P450 4d2 OS=Drosophila melanogaster GN=Cyp4d2 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 7.422e-23
Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = -1
Query:  275 IPISCRETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 562
            +P+  R  A++VEI G  +P GT   + + V+ +D + F  PD+F+PERFD    +  Q HP AY+PF  GPR CIGQKFAM E+K ++  L R++
Sbjct:  378 VPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERFDA---DVPQIHPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHF 470          

HSP 2 Score: 42.743 bits (99), Expect = 7.422e-23
Identity = 23/73 (31.51%), Postives = 41/73 (56.16%), Query Frame = -2
Query:  550 LLAGSATTSFALSSIVYLVAAHPEVENKLLAEI-DGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLV 765
            +  G  TT+ A+S  +Y ++ HPEV+ +L  EI D  G     P  L    +  +++ VIKE++R++   P++
Sbjct:  309 MFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFMENVIKESLRLHPPVPMI 381          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP4CU_BLAGE (Cytochrome P450 4c21 OS=Blattella germanica GN=CYP4C21 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.767e-22
Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = -1
Query:  266 RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFR 547
            RE  ++ E+GGY +P GT +  ++  + ++ + FP P  F P+ F P  +    RHP AY+PF  GPR CIGQ+FA+ E K+ L +L R+Y FR
Sbjct:  380 REAHQDFELGGYTIPAGTNIDFSVPFIHRNPEIFPNPRCFNPDNFLP--DRVVNRHPYAYIPFSAGPRNCIGQRFALLEEKVVLSYLLRHYRFR 471          

HSP 2 Score: 43.5134 bits (101), Expect = 2.767e-22
Identity = 26/86 (30.23%), Postives = 46/86 (53.49%), Query Frame = -2
Query:  568 TESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEI-DGFGPRELVPTALDLQQKFPYLDQVIKEAMRIY 822
            +E  N  T   I    +  +  G  T S A++ +++ +  HPE++ +   E+ D F   + VPT  DL     YL++VIKE++R++
Sbjct:  288 SEDDNKLTDTDILEEVHTFMFEGHDTVSAAMTWLLFELGHHPEIQEEAYKEVQDIFQGSDRVPTMADLNN-MNYLERVIKESLRLH 372          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP4C3_DROME (Cytochrome P450 4c3 OS=Drosophila melanogaster GN=Cyp4c3 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.085e-22
Identity = 46/124 (37.10%), Postives = 68/124 (54.84%), Query Frame = -1
Query:  194 SIPISCRETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLELEFGIILNFKHGVK 565
            S+P+  R   ++V IGG  +P GT   +    + ++ + FP+P++F P+ F P  E    RHP AY+PF  GPR CIGQKFA+ E K  +  + R Y    + D    L L   +IL  K G++
Sbjct:  408 SVPMMARMVGEDVNIGGKIVPAGTQAIIMTYALHRNPRVFPKPEQFNPDNFLP--ENCAGRHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKI-EAVDRREDLTLLGELILRPKDGLR 528          

HSP 2 Score: 43.8986 bits (102), Expect = 6.085e-22
Identity = 27/103 (26.21%), Postives = 52/103 (50.49%), Query Frame = -2
Query:  550 LSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDG-FGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLV 855
            L L++ A +  T   N    + +    +E    G  TTS A+S  ++L+  HPE + +++ E+D  FG  +  P  +       YL+  IK+++R++   P++
Sbjct:  314 LDLLIDASKEGTVLSNEDIREEVDTFMFE----GHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKNLMDMRYLECCIKDSLRLFPSVPMM 412          
The following BLAST results are available for this feature:
BLAST of CV885074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
CP3AB_MOUSE2.941e-2537.14Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE... [more]
CP343_HUMAN8.438e-2536.67Cytochrome P450 3A43 OS=Homo sapiens GN=CYP3A43 PE... [more]
CP3AV_MESAU1.429e-2435.29Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CY... [more]
CP3AA_MESAU6.940e-2437.84Lithocholate 6-beta-hydroxylase OS=Mesocricetus au... [more]
CP4D1_DROSI2.588e-2339.17Cytochrome P450 4d1 OS=Drosophila simulans GN=Cyp4... [more]
CP4D1_DROME4.382e-2339.17Cytochrome P450 4d1 OS=Drosophila melanogaster GN=... [more]
CP4S3_DROME4.385e-2343.27Probable cytochrome P450 4s3 OS=Drosophila melanog... [more]
CP4D2_DROME7.422e-2344.79Cytochrome P450 4d2 OS=Drosophila melanogaster GN=... [more]
CP4CU_BLAGE2.767e-2242.55Cytochrome P450 4c21 OS=Blattella germanica GN=CYP... [more]
CP4C3_DROME6.085e-2237.10Cytochrome P450 4c3 OS=Drosophila melanogaster GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012D10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885074 ID=CV885074; Name=CV885074; organism=Citrus sinensis; type=EST; length=922bp
TTTTTTTGGATACTAGAGAGTTCATTACATGCCAGCAGCCCAGAACAATG
TTCTCATATATAAGTTTGATGTAGATTCATTGCTCTGTGAACGGAATTAT
TTCACAAACGGCTTATTGTACGCAAGATATCGAAGAAGTTAAGAAAAGTC
AAAGGCGATATTAGAGCCTTGAAGTTCGGCTCAGGACACGGAGCTTGACC
CCGTGCTTGAAGTTGAGGATTATGCCGAACTCAAGTTCCAAAGGATTTTC
CATGTCAGGAGAATGTCGAAATACATAATTCCTGTATAAATGTATCAGCG
AGAGCTTTATTTCTTGCATGGCGAATTTCTGCCCAATGCATGCTCGGGGT
CCAATTCCAAACGGTAGGTATGCACAAGGATGCCTCTGCTTCGCTTCTTC
ACAATTTGGATCGAACCTCTCTGGCTTGAACTTGTCTGGTTCTGGGAAGT
TCTTTGAATCTTTTGCCACTACACCTAGTGCTAGCCACACCCATGTCCCC
TTGGGGAGACGGTAACCACCTATCTCCACTTCTTTTGCTGTTTCTCTACA
ACTAATGGGGATACTAGATAAATCCTCATGGCTTCTTTTATCACCTGATC
AAGATAGGGAAATTTCTGTTGAAGATCAAGAGCGGTTGGCACAAGTTCCC
TAGGACCAAACCCATCAATCTCTGCAAGCAGCTTGTTCTCAACTTCTGGA
TGTGCAGCTACTAAGTATACAATCGAAGATAACGCAAAAGATGTGGTTGC
TGATCCAGCAAGCAGGTGCTCGTAAGTTACTGCACTGATGTAGTCAGGAG
TAAAGACATTCTTGGACTCTGTCTCCAATTCCCTTGCCTTCACAATGAGT
GACAACAAGTCCTTGGATCCTTGTTTGCTCTCTTTCATTCTTTTGAATAC
AATTTCATCAAGCCGGCCGCTC
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