CV885074

Overview
NameCV885074
Unique NameCV885074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP9E2_BLAGE (Cytochrome P450 9e2 OS=Blattella germanica GN=CYP9E2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 5.319e-20
Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = -1
Query:  287 YRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERF-DPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHL 514
            Y L  G  VW+ +  +  D K +P P+KF PERF D N +  K   P  YLPFG GPR CIG +FA+ E K++L+HL
Sbjct:  419 YTLEPGDAVWIPIYAIHHDPKYYPNPEKFDPERFSDENKDNIK---PFTYLPFGSGPRNCIGNRFALMESKIALVHL 492          

HSP 2 Score: 43.1282 bits (100), Expect = 5.319e-20
Identity = 34/125 (27.20%), Postives = 59/125 (47.20%), Query Frame = -2
Query:  523 DLLSLIVKARE--LETE----------SKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVVEKQQKKWR 861
            D++ L+++A+E  L++E          SK  +  D ++A       AG  T S  L  + +L+A +P+V+N+L  EID            +      YLD V+ E++R+Y  +     K  K +R
Sbjct:  288 DMIHLLMQAKEGTLKSEENGETNGKIASKPKWDDDDLTAQAVLFFFAGFDTASTLLCFMSHLLATNPDVQNRLQDEIDQSLEENDGKLTYEAIHSMKYLDMVVSESLRLYPPAIFTDRKCVKNYR 412          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CCD1P_DROME (Probable cytochrome P450 12d1 proximal, mitochondrial OS=Drosophila melanogaster GN=Cyp12d1-p PE=2 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 6.921e-20
Identity = 41/109 (37.61%), Postives = 61/109 (55.96%), Query Frame = -1
Query:  227 RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERF--DPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLELEF 547
            R    +V + GYR+PKGT V L   V+ K++  +P PD+F PER+  DP   +  Q  P  +LPFG GPR CIG++    E++ ++  L RN+    + D   P +  F
Sbjct:  396 RTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTMF 504          

HSP 2 Score: 36.965 bits (84), Expect = 6.921e-20
Identity = 22/77 (28.57%), Postives = 38/77 (49.35%), Query Frame = -2
Query:  568 PDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIY 798
            P     ++ + L AG   T+  LS+++  ++ HP+ + KL  E+    P +      +  +  PYL  VIKE +R Y
Sbjct:  312 PKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYY 388          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CCD1D_DROME (Probable cytochrome P450 12d1 distal, mitochondrial OS=Drosophila melanogaster GN=Cyp12d1-d PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.921e-20
Identity = 41/109 (37.61%), Postives = 61/109 (55.96%), Query Frame = -1
Query:  227 RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERF--DPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLELEF 547
            R    +V + GYR+PKGT V L   V+ K++  +P PD+F PER+  DP   +  Q  P  +LPFG GPR CIG++    E++ ++  L RN+    + D   P +  F
Sbjct:  396 RTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTMF 504          

HSP 2 Score: 36.965 bits (84), Expect = 6.921e-20
Identity = 22/77 (28.57%), Postives = 38/77 (49.35%), Query Frame = -2
Query:  568 PDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIY 798
            P     ++ + L AG   T+  LS+++  ++ HP+ + KL  E+    P +      +  +  PYL  VIKE +R Y
Sbjct:  312 PKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYY 388          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP27A_RAT (Sterol 26-hydroxylase, mitochondrial OS=Rattus norvegicus GN=Cyp27a1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.996e-20
Identity = 39/99 (39.39%), Postives = 55/99 (55.56%), Query Frame = -1
Query:  251 TAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQ--RHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDM 541
            T KE EI G+  PK T   L   VV++D   FPEP+ F+P R+    E+     +HP   +PFG G R+C+G++ A  E++L L  L + Y    SP M
Sbjct:  410 TEKETEINGFLFPKNTQFVLCHYVVSRDPSVFPEPESFQPHRWLRKREDDNSGIQHPFGSVPFGYGVRSCLGRRIAELEMQLLLSRLIQKYEVVLSPGM 508          

HSP 2 Score: 47.7506 bits (112), Expect = 8.996e-20
Identity = 32/97 (32.99%), Postives = 49/97 (50.52%), Query Frame = -2
Query:  538 SKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSP----LVVEKQ 816
            +K + +P        E +LAG  TTS  L+  +Y ++ +PE++  L  E+ G  P   VP   D     P L  VIKE +R+Y V P    ++ EK+
Sbjct:  318 TKELLSPQETVGTFPELILAGVDTTSNTLTWALYHLSKNPEIQEALHKEVTGVVPFGKVPQNKDFAH-MPLLKAVIKETLRLYPVVPTNSRIITEKE 413          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: C13AA_CAEEL (Putative cytochrome P450 CYP13A10 OS=Caenorhabditis elegans GN=cyp-13A10 PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 9.002e-20
Identity = 38/107 (35.51%), Postives = 58/107 (54.21%), Query Frame = -1
Query:  233 RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDK-FKPERF-DPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLEL 547
            R   +  ++G   +  GT V +    +  D+K + +  K FKPER+ DPNC++  Q+    Y+ FG+GPR C+G + A  E K+ L H+ R Y F      E PL+L
Sbjct:  396 RRCMRATKLGNVEVEVGTMVQVDTWSLHTDTKIWGDDAKEFKPERWLDPNCDQVFQKG--GYISFGLGPRQCVGMRLAYMEEKMLLAHILRKYTFEVGTKTEIPLKL 500          

HSP 2 Score: 50.8322 bits (120), Expect = 9.002e-20
Identity = 35/116 (30.17%), Postives = 57/116 (49.14%), Query Frame = -2
Query:  568 KDLLSLIVKARELETESKNVFTPDYISAVTYEH---------------LLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTAL--DLQQKFPYLDQVIKEAMRIY 864
            +D + L ++AR  + E       D+    +Y +               L+AG  TT+ +LS   +L+A HPEV+ KL  EI+    RE +  ++  D   K  Y+D +IKE +R+Y
Sbjct:  276 QDFIDLFLEARADDVEHFQENNGDFSKTSSYGNRQLTTQEIVGQCLVFLIAGFDTTALSLSYTTFLLATHPEVQKKLQEEIE----RECIEPSISFDHLSKLKYMDCIIKETLRLY 387          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: C13A1_CAEEL (Putative cytochrome P450 CYP13A1 OS=Caenorhabditis elegans GN=cyp-13A1 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 1.523e-19
Identity = 34/107 (31.78%), Postives = 57/107 (53.27%), Query Frame = -1
Query:  233 RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNF-PEPDKFKPERFD-PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLEL 547
            R   +  ++G  ++  GT + +    +  D   +  + + FKPER+  PN ++  Q+    Y+PFG+GPR CIG + A  E K+ L+H+ R + F      E PL+L
Sbjct:  396 RRCMRNTKLGNMKVEVGTMIQVDTWTLHTDPNIWGDDAEDFKPERWQTPNSDQIYQKS--GYIPFGLGPRQCIGMRLAYMEEKILLVHILRKFTFETGAKTEIPLKL 500          

HSP 2 Score: 53.5286 bits (127), Expect = 1.523e-19
Identity = 37/137 (27.01%), Postives = 63/137 (45.99%), Query Frame = -2
Query:  568 EIVFKRMKESKQGSK---------DLLSLIVKARELETESKNVFTPDYISAVTYEH---------------LLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIY 906
            + +  R+K+ ++  K         D + L + A+  + E       D+  + TY +               L+AG  TT+ +LS   YL+A HPE++ KL  E++   P   V   +D   K  Y++ V KEA+R+Y
Sbjct:  253 DAIHNRIKQREEDQKNGIEIGEPADFIDLFLDAKAEDVEHFGENNGDFSKSTTYTNRQLTTEEIVGQCTVFLIAGFDTTALSLSYATYLLATHPEIQKKLQEEVNRECPNPEV--TIDQLSKLKYMECVFKEALRLY 387          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP6T1_DROME (Probable cytochrome P450 6t1 OS=Drosophila melanogaster GN=Cyp6t1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.574e-19
Identity = 32/80 (40.00%), Postives = 52/80 (65.00%), Query Frame = -1
Query:  275 YRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 514
            ++L  GT V++++  + +D++ +P P+ F PERF  + E+ +Q HP  YLPFG GPR CIG      EIK+ L+H+  ++
Sbjct:  416 FKLRAGTPVYISVLGIHRDAQYWPNPEVFDPERF--SAEQRQQHHPMTYLPFGAGPRGCIGTLLGQLEIKVGLLHILNHF 493          

HSP 2 Score: 43.8986 bits (102), Expect = 2.574e-19
Identity = 29/117 (24.79%), Postives = 56/117 (47.86%), Query Frame = -2
Query:  568 EIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAE----IDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIY 906
            + V  +  ES +   DL+ + ++ +  E     +  PD+ +A     LLAG  T+S  ++  +Y +A +  ++++L  E    +     R+L   + D      YL QV+ E +R+Y
Sbjct:  276 DYVLSQRAESGENRHDLIDIFLQLKRTEPAESIIHRPDFFAAQAAFLLLAGFDTSSSTITFALYELAKNTTIQDRLRTELRAALQSSQDRQL---SCDTVTGLVYLRQVVDEVLRLY 389          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: C12B1_DROAC (Cytochrome P450 12b1, mitochondrial OS=Drosophila acanthoptera GN=Cyp12b1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.347e-19
Identity = 47/132 (35.61%), Postives = 71/132 (53.79%), Query Frame = -1
Query:  197 SSIPISCRETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERF-----DPN---CEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLELEFGIILNFKHGV 568
            S  P + R   K++ + GYR+P+G  V + +  ++   K F +  +F PER+     DP+   C  A+ R+P  YL FG GPR CIG++ A  E++  L  L R Y      +M  PL+ E  IIL+  HG+
Sbjct:  396 SITPGNFRIATKDLVLSGYRVPRGEGVLMGVLELSNSEKYFGQSGQFMPERWLKADTDPDVKACPAARSRNPFVYLAFGFGPRTCIGKRIAELEMETLLTRLLRRYQVSWLAEM--PLQYESNIILS-PHGI 524          

HSP 2 Score: 40.4318 bits (93), Expect = 3.347e-19
Identity = 25/70 (35.71%), Postives = 36/70 (51.43%), Query Frame = -2
Query:  556 LLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSP 765
            L+AG  TTS A  +I+Y +A +P  + +L  E     P    P   +  +  PYL   IKE MRI  ++P
Sbjct:  330 LMAGIDTTSSAFVTILYHLARNPHKQRQLHRERRRILPDSDEPLTPENTKNMPYLRACIKECMRITSITP 399          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: C13A3_CAEEL (Putative cytochrome P450 CYP13A3 OS=Caenorhabditis elegans GN=cyp-13A3 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 3.348e-19
Identity = 36/106 (33.96%), Postives = 57/106 (53.77%), Query Frame = -1
Query:  233 RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPE-PDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLEL 547
            R+  K   + G ++ +GT V      +  D K + E  ++FKPER++   E+A  +   AYLPFG+GPR CIG + A  E K+ L  + + Y    + +   PL+L
Sbjct:  396 RKCMKSTTVLGMKIEEGTNVQADTWTLHYDPKFWGENANEFKPERWESGDEQAVAKG--AYLPFGLGPRICIGMRLAYMEEKMLLAQILKKYSLETTFETHIPLKL 499          

HSP 2 Score: 56.9954 bits (136), Expect = 3.348e-19
Identity = 44/134 (32.84%), Postives = 65/134 (48.51%), Query Frame = -2
Query:  529 ESKQGSKDLLSLIVKARE----LETESKNVF------------TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVVEKQQKK 882
            ES    +D + L +  +     LE E+KN F            T D I    +  LLAG  TT+ +LS   YL+A HPE++ KL  E+D   P   V    D   K  Y++ VIKE +R+Y ++ +V  ++  K
Sbjct:  269 ESSGEPQDFIDLFLDVQADTDFLEDETKNGFARSQIVKVDKHLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLARHPEIQKKLQEEVDRECPDPEV--TFDQLSKLKYMECVIKETLRLYPLASIVHNRKCMK 400          
BLAST of CV885074 vs. ExPASy Swiss-Prot
Match: CP24A_RAT (1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial OS=Rattus norvegicus GN=Cyp24a1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.349e-19
Identity = 39/105 (37.14%), Postives = 59/105 (56.19%), Query Frame = -1
Query:  275 KRSHEDLSSIPISCRETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 589
            K S     S+P + R   K   +G Y LPKGT + L   V+     NF +  KF+PER+    ++ K+ +P A+LPFGIG R CIG++ A  ++ L+L  + + Y
Sbjct:  382 KESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERW---LQKEKKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKY 483          

HSP 2 Score: 43.8986 bits (102), Expect = 3.349e-19
Identity = 27/85 (31.76%), Postives = 46/85 (54.12%), Query Frame = -2
Query:  571 NVFTPDYIS-----AVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRI 810
            +++  D++S     A   E  LA   TT+ +L  I+Y ++ +P+ + +LL E+    P    P A DL+   PYL   +KE+MR+
Sbjct:  304 DIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRN-MPYLKACLKESMRL 387          
The following BLAST results are available for this feature:
BLAST of CV885074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
CP9E2_BLAGE5.319e-2048.05Cytochrome P450 9e2 OS=Blattella germanica GN=CYP9... [more]
CCD1P_DROME6.921e-2037.61Probable cytochrome P450 12d1 proximal, mitochondr... [more]
CCD1D_DROME6.921e-2037.61Probable cytochrome P450 12d1 distal, mitochondria... [more]
CP27A_RAT8.996e-2039.39Sterol 26-hydroxylase, mitochondrial OS=Rattus nor... [more]
C13AA_CAEEL9.002e-2035.51Putative cytochrome P450 CYP13A10 OS=Caenorhabditi... [more]
C13A1_CAEEL1.523e-1931.78Putative cytochrome P450 CYP13A1 OS=Caenorhabditis... [more]
CP6T1_DROME2.574e-1940.00Probable cytochrome P450 6t1 OS=Drosophila melanog... [more]
C12B1_DROAC3.347e-1935.61Cytochrome P450 12b1, mitochondrial OS=Drosophila ... [more]
C13A3_CAEEL3.348e-1933.96Putative cytochrome P450 CYP13A3 OS=Caenorhabditis... [more]
CP24A_RAT3.349e-1937.141,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012D10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885074 ID=CV885074; Name=CV885074; organism=Citrus sinensis; type=EST; length=922bp
TTTTTTTGGATACTAGAGAGTTCATTACATGCCAGCAGCCCAGAACAATG
TTCTCATATATAAGTTTGATGTAGATTCATTGCTCTGTGAACGGAATTAT
TTCACAAACGGCTTATTGTACGCAAGATATCGAAGAAGTTAAGAAAAGTC
AAAGGCGATATTAGAGCCTTGAAGTTCGGCTCAGGACACGGAGCTTGACC
CCGTGCTTGAAGTTGAGGATTATGCCGAACTCAAGTTCCAAAGGATTTTC
CATGTCAGGAGAATGTCGAAATACATAATTCCTGTATAAATGTATCAGCG
AGAGCTTTATTTCTTGCATGGCGAATTTCTGCCCAATGCATGCTCGGGGT
CCAATTCCAAACGGTAGGTATGCACAAGGATGCCTCTGCTTCGCTTCTTC
ACAATTTGGATCGAACCTCTCTGGCTTGAACTTGTCTGGTTCTGGGAAGT
TCTTTGAATCTTTTGCCACTACACCTAGTGCTAGCCACACCCATGTCCCC
TTGGGGAGACGGTAACCACCTATCTCCACTTCTTTTGCTGTTTCTCTACA
ACTAATGGGGATACTAGATAAATCCTCATGGCTTCTTTTATCACCTGATC
AAGATAGGGAAATTTCTGTTGAAGATCAAGAGCGGTTGGCACAAGTTCCC
TAGGACCAAACCCATCAATCTCTGCAAGCAGCTTGTTCTCAACTTCTGGA
TGTGCAGCTACTAAGTATACAATCGAAGATAACGCAAAAGATGTGGTTGC
TGATCCAGCAAGCAGGTGCTCGTAAGTTACTGCACTGATGTAGTCAGGAG
TAAAGACATTCTTGGACTCTGTCTCCAATTCCCTTGCCTTCACAATGAGT
GACAACAAGTCCTTGGATCCTTGTTTGCTCTCTTTCATTCTTTTGAATAC
AATTTCATCAAGCCGGCCGCTC
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