CV885062

Overview
NameCV885062
Unique NameCV885062
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.548e-18
Identity = 57/156 (36.54%), Postives = 88/156 (56.41%), Query Frame = -3
Query:  462 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVETR-VMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYA-IDELVDPRLGNHYSE----HEVYCMLHAASLCIRRDPHSRPRMSQVLRIL 911
            IVHRD++P NILL  D EP + DFG+A+        + +  V GT GY+APE A +   + ++DVYS+GVVL+EL+T +KA+D +   G+  +  W R +  +   I ++VDP L +   +     +V   L  A  C  ++   RP M  V++ L
Sbjct:  938 IVHRDIKPMNILLDSDLEPHISDFGIAKLLDQSATSIPSNTVQGTIGYMAPENAFTTVKSRESDVYSYGVVLLELITRKKALDPSF-NGETDIVGWVRSVWTQTGEIQKIVDPSLLDELIDSSVMEQVTEALSLALRCAEKEVDKRPTMRDVVKQL 1092          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.458e-17
Identity = 62/173 (35.84%), Postives = 92/173 (53.18%), Query Frame = -3
Query:  417 IVHRDMRPNNILLTHDFEPLVGDFGLARW---QXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLE--EYAIDELVDPRLGN--HYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMS-TPGY 911
            IVHRD++ +N+LL  + E  +GDFGLA+      D +    T    ++GY+APEYA S + TEK+DVYS G+VL+E+VTG+   D +    +  +  W    LE    A D+L+DP+L     + E     +L  A  C +  P  RP   Q       D+++  Y + T GY
Sbjct: 1080 IVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTD-SVFGAEMDMVRWVETHLEVAGSARDKLIDPKLKPLLPFEEDAACQVLEIALQCTKTSPQERPSSRQAC-----DSLLHVYNNRTAGY 1246          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.487e-17
Identity = 56/159 (35.22%), Postives = 85/159 (53.46%), Query Frame = -3
Query:  462 IVHRDMRPNNILLTHDFEPLVGDFGLAR---WQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLE----EYAIDELVDPRLGN--HYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRIL 911
            IVHRD++ +N+LL  + E  +GDFGLA+      D +    T   G++GY+APEYA S + TEK+DVYS G+VL+E+VTG+   +    + +  +  W   +L+      A ++L+D  L +     E   Y +L  A  C +  P  RP   Q    L
Sbjct: 1075 IVHRDIKSSNVLLDSNIEAHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTEAMFDE-ETDMVRWVETVLDTPPGSEAREKLIDSELKSLLPCEEEAAYQVLEIALQCTKSYPQERPSSRQASEYL 1232          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.242e-17
Identity = 57/177 (32.20%), Postives = 95/177 (53.67%), Query Frame = -3
Query:  399 IVHRDMRPNNILLTHDFEPLVGDFGLARW---QXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHA---ASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGYDVGSRS 911
            ++HRD++ +NILL   +   V DFGL++    + D    +     GT GY+ PEY +  Q+T K+DVYSFGVVL+EL++G KA+  N  +  + L E+  P +       ++D R+    + +E+  + H    A+ C+      RP M +V+  LE  + +   ++ P  +  SRS
Sbjct:  575 VIHRDIKSSNILLDATWTAKVSDFGLSQMGPTEEDDVSHLSLHAAGTLGYIDPEYYKFQQLTTKSDVYSFGVVLLELLSGHKAIHNNEDENPRNLVEYVVPYILLDEAHRILDQRIPPP-TPYEIEAVAHVGYLAAECLMPCSRKRPSMVEVVSKLE--SALAACLTAPKTETVSRS 748          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.541e-17
Identity = 53/150 (35.33%), Postives = 84/150 (56.00%), Query Frame = -3
Query:  474 RVGCIVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQV 923
            R+  IVHRD+   NILL +D+   + DFG A+     D    + V GT+GY+APE+A + ++TEK DVYSFGV+++EL+ G+   DL         +      L   + + +++PR  N     ++  M+  A LC++ +P SRP M  +
Sbjct:  973 RITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKT-DSSNWSAVAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHPGDL---VSSLSSSPGEALSLRSISDERVLEPRGQN---REKLLKMVEMALLCLQANPESRPTMLSI 1115          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.237e-17
Identity = 54/156 (34.62%), Postives = 85/156 (54.49%), Query Frame = -3
Query:  459 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVE-----TRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILE 911
            I+HRD++P+NILL     P V DFG+++       GV+     T V GT GY+ PEY  S ++TEK+DVYS G+V +E++TG + +   R      +        +   +  ++D  +G  YSE  V   +  A  C + +P +RP M +++R LE
Sbjct:  751 IIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRPISHGRN-----IVREVNEACDAGMMMSVIDRSMG-QYSEECVKRFMELAIRCCQDNPEARPWMLEIVRELE 900          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: STPKL_ARATH (Serine/threonine-protein kinase-like protein At5g23170 OS=Arabidopsis thaliana GN=At5g23170 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.237e-17
Identity = 53/147 (36.05%), Postives = 80/147 (54.42%), Query Frame = -3
Query:  474 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYC-MLHAASLCIRRDPHSRPRMSQV 911
            I+HRD++  NIL   ++E  + DFGLA     GD  +     GT GYL P Y     ++ K DVYS+GVVL+E+V+ RKA+D++R      + +WA PL++E  I E+     G       +   +L  A+ C+  D  SRP   ++
Sbjct:  149 IIHRDIKSENILFDSNWEAKLADFGLAV-DFGGDKKIRPAPAGTIGYLDPCYTLPENLSMKTDVYSYGVVLLEIVSCRKAIDVSRSPAS--IVDWAVPLIKEGRIGEICGGGGGGSGVFRGMSLRLLRMAARCVSSDVESRPCFGEI 292          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.451e-17
Identity = 56/160 (35.00%), Postives = 89/160 (55.62%), Query Frame = -3
Query:  459 GC---IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVETRVM-GTFGYLAPEYAQSGQI--TEKADVYSFGVVLVELVTGRKAV-DLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILE 917
            GC   I+HRD++ +++ L  ++EP + DFGLA+   +G   ++  ++ G+ GYL PE+ Q      T K+DVY FGVVL EL+TG+K + D    +    L  W R L+ +    + +DP++    SE ++   L    LC    P  RP M QV+ +L+
Sbjct:  689 GCSPPIIHRDVKASSVYLDQNWEPRLSDFGLAKVFGNG---LDDEIIHGSPGYLPPEFLQPEHELPTPKSDVYCFGVVLFELMTGKKPIEDDYLDEKDTNLVSWVRSLVRKNQASKAIDPKIQETGSEEQMEEALKIGYLCTADLPSKRPSMQQVVGLLK 845          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 9.451e-17
Identity = 55/159 (34.59%), Postives = 81/159 (50.94%), Query Frame = -3
Query:  462 IVHRDMRPNNILLTHDFEPLVGDFGLARW-QXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDL--NRPKGQQCLTEWARPLL------EEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRIL 911
            ++H D++P NILL   FEP + DFGL +     G     + V GT GY+APE+  S  IT K DVYS+GVVL+EL+TG +  +L     +    L +  R L       E+  ID  +D +L    +  +   ++  A  C+  D   RP M   ++ L
Sbjct:  654 VIHCDVKPENILLDQAFEPKITDFGLVKLLNRGGSTQNVSHVRGTLGYIAPEWVSSLPITAKVDVYSYGVVLLELLTGTRVSELVGGTDEVHSMLRKLVRMLSAKLEGEEQSWIDGYLDSKLNRPVNYVQARTLIKLAVSCLEEDRSKRPTMEHAVQTL 812          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.234e-16
Identity = 57/155 (36.77%), Postives = 84/155 (54.19%), Query Frame = -3
Query:  459 IVHRDMRPNNILLTHDFEPLVGDFGLARWQX--DGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLH--AASLCIRRDPHSRPRMSQVLRILE 911
            I+HRDM+ +N+LL  + E  V DFG+AR     D  + V T + GT GY+ PEY QS + + K DVYS+GVVL+EL+TG++  D +   G   L  W +    +  I ++ DP L       E+  + H   A  C+      RP M QV+ + +
Sbjct: 1005 IIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVST-LAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SPDFGDNNLVGWVKQ-HAKLRISDVFDPELMKEDPALEIELLQHLKVAVACLDDRAWRRPTMVQVMAMFK 1156          
The following BLAST results are available for this feature:
BLAST of CV885062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 238
Match NameE-valueIdentityDescription
RPK1_IPONI8.548e-1836.54Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
GSO1_ARATH1.458e-1735.84LRR receptor-like serine/threonine-protein kinase ... [more]
GSO2_ARATH2.487e-1735.22LRR receptor-like serine/threonine-protein kinase ... [more]
ACCR4_ARATH4.242e-1732.20Serine/threonine-protein kinase-like protein CCR4 ... [more]
Y1571_ARATH5.541e-1735.33Probable leucine-rich repeat receptor-like protein... [more]
Y5374_ARATH7.237e-1734.62Probable LRR receptor-like serine/threonine-protei... [more]
STPKL_ARATH7.237e-1736.05Serine/threonine-protein kinase-like protein At5g2... [more]
Y2242_ARATH9.451e-1735.00Probable LRR receptor-like serine/threonine-protei... [more]
KPRO_MAIZE9.451e-1734.59Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
BRI1_ARATH1.234e-1636.77Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012D03_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885062 ID=CV885062; Name=CV885062; organism=Citrus sinensis; type=EST; length=928bp
ATACTCTCAGCTTCCTCCATTTTTTCGAAAGAATTACAAAAGCTTAACTT
TGCCTACTTTCCCTACCACTATACATGAGCAAAATATAGATGGACATTGG
GGAAAAAATAGAAAGAACCTAGAACTGGGTAAAAGGGAAAAAGGGGATTA
CAAAAGGACCAAAATACGTATTTAGCAGAATACTAGTTGATATGAAATAC
TAGTTGATATGAAAGGTAAGCTCTTTACAGATCATTTTCGCGGGAGGTCC
TTCTGGCCTTATCCCTTTCCCAAAAGGCTGCCTTTAGTGAATCAAGGGGG
AGCTTCCTACCGAATCCTTCCAAAGCCTCATTCATCAAGGGACCGCTATA
AGGTAGTTGCTGTTGCTGATGCTGCTGCTGCTCTACCCAGATCCGTCCAC
TCCGGCTGCCAACATCATACCCAGGTGTTGACATGTAAGTGTCTATGACC
GTGTCACCTTCCAATATGCGAAGCACCTGTGACATGCGGGGCCTGGAATG
AGGATCGCGCCTTATACACAAAGATGCAGCATGAAGCATGCAATATACTT
CATGTTCAGAATAGTGATTCCCTAGCCTTGGGTCAACCAGTTCATCTATA
GCATATTCTTCAAGAAGCGGACGTGCCCATTCGGTAAGACACTGTTGGCC
CTTTGGTCGGTTGAGGTCCACTGCTTTTCGTCCGGTAACAAGCTCAACTA
ATACCACACCAAATGAATAGACATCAGCTTTTTCAGTAATCTGGCCACTT
TGAGCATATTCCGGCGCCAAATACCCAAATGTTCCCATTACTCTTGTTTC
CACACCCATGTCACCATCANGCTGCCACCTTGCAAGGCCAAAATCTCCAA
CCAGTGGTTCAAAATCATGGGTGAGAAGGATGTTATTTGGTCGCATGTCA
CGATGCACAATGCAGCCCACTCTGCATT
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