CV885062

Overview
NameCV885062
Unique NameCV885062
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.370e-30
Identity = 73/154 (47.40%), Postives = 102/154 (66.23%), Query Frame = -3
Query:  459 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMG-VETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARP-LLEEYAIDELVDPRLGNHYSEHEVYCMLHAASL-CIRRDPHSRPRMSQVLRILE 911
            +++RD + +NILL  ++   + DFGLA+    GD   V TRVMGT GY APEY  +G +T K+DVYSFGVVL+EL++GR+AVD NRP G++ L EWA+P L+ +  I  ++D RL + YS  E  C +   SL C+  +   RP MS+V+  LE
Sbjct:  199 VIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEA-CKVATLSLRCLTTEIKLRPNMSEVVSHLE 351          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.735e-30
Identity = 73/176 (41.48%), Postives = 106/176 (60.23%), Query Frame = -3
Query:  390 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMG-VETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLL-EEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGYDVGSRSGRI 911
            +++RD +  NILL  +F   + DFGLA+    GD   V T+VMGT GY APEY  +G++T K+DVYSFGVVL+EL++GR+AVD ++   +Q L +WA P L ++  +  ++D RLG  Y +   Y     A  C+  D   RP+MS+VL  L+         + PG  VG+R  +I
Sbjct:  212 VIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVLAKLD-----QLESTKPGTGVGNRQAQI 382          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.271e-29
Identity = 75/165 (45.45%), Postives = 97/165 (58.79%), Query Frame = -3
Query:  417 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGY 911
            IVHRD++ +NILL     P V DFGLA+   D    + TRV GT GYLAPEYA  G +TEK DVY+FGVV +ELV+GR   D N    ++ L EWA  L E+    EL+D +L   ++  E   M+  A LC +     RP MS+V+ +L GD  +    S PGY
Sbjct:  813 IVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEDEKRYLLEWAWNLHEKGREVELIDHQL-TEFNMEEGKRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEVSDVTSKPGY 976          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 2.169e-29
Identity = 69/153 (45.10%), Postives = 97/153 (63.40%), Query Frame = -3
Query:  456 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQC-LTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEG 911
            IVHRD++  N+LL       + DFGLA+   + +  + TR+ GT GY+APEYA  G +T+KADVYSFGVV +E+V+G+   +  RPK +   L +WA  L E+ ++ ELVDP LG  +S+ E   ML+ A LC    P  RP MS V+ +L+G
Sbjct:  789 IVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNY-RPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQG 940          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.169e-29
Identity = 66/172 (38.37%), Postives = 105/172 (61.05%), Query Frame = -3
Query:  402 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQ--CLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGYDVGSR 911
            I+HRD++  N+LL  DFE +VGDFGLA+        V T+V GT G++APEY  +G+ +E+ DV+ +G++L+ELVTG++A+D +R + +    L +  + L  E  +  +VD  L   Y + EV  M+  A LC +  P  RP MS+V+R+LEG+ + + +      +V  R
Sbjct:  413 IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLGAIVDKNLDGEYIKEEVEMMIQVALLCTQGSPEDRPVMSEVVRMLEGEGLAERWEEWQNVEVTRR 584          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 2.169e-29
Identity = 70/156 (44.87%), Postives = 101/156 (64.74%), Query Frame = -3
Query:  459 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMG----VETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARP-LLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILE 911
            +++RD + +NILL  ++   + DFGLAR   DG MG    V TRVMGT GY APEY  +G ++ K+DVYSFGVVL+EL++GR+A+D N+P G+  L +WARP L  +  +  ++DPRL   YS      +   A  CI  D  SRP M+++++ +E
Sbjct:  199 VIYRDFKASNILLDSNYNAKLSDFGLAR---DGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTME 351          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.169e-29
Identity = 68/171 (39.77%), Postives = 94/171 (54.97%), Query Frame = -3
Query:  399 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGYDVGSRS 911
            ++HRD++P+N+L+  D  P +GDFGLAR    G     T V+GT GY+APE A++G  +  +DV++FGV+L+E+V+GRK  D     G   + +W   L     I   +DPRLG+ Y E E    L    LC    P SRP M  VLR L  D  +       GY   SR+
Sbjct:  487 VIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKPTD----SGTFFIADWVMELQASGEILSAIDPRLGSGYDEGEARLALAVGLLCCHHKPESRPLMRMVLRYLNRDEDVPEIHDNWGYSDSSRT 653          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.241e-29
Identity = 67/153 (43.79%), Postives = 94/153 (61.44%), Query Frame = -3
Query:  456 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDL-NRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEG 911
            I+HRD++  NILL   FE +VGDFGLA+     D  V T V GT G++APEY  +GQ +EK DV+ FGV+++EL+TG K +D  N    +  +  W R L  E    E+VD  L   + +  +  ++  A LC +  P+ RPRMSQVL++LEG
Sbjct:  422 IIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVLEG 574          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.406e-28
Identity = 70/171 (40.94%), Postives = 96/171 (56.14%), Query Frame = -3
Query:  399 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGYDVGSRS 911
            ++HRD++P+N+L+  D  P +GDFGLAR    G     T V+GT GY+APE A++G+ +  +DV++FGV+L+E+V+GR+  D     G   L +W   L     I   VDPRLG  Y   E    L    LC  + P SRP M  VLR L GD  +    +  GY   SRS
Sbjct:  486 VIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTD----SGTFFLADWVMELHARGEILHAVDPRLGFGYDGVEARLALVVGLLCCHQRPTSRPSMRTVLRYLNGDDDVPEIDNDWGYSDSSRS 652          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.836e-28
Identity = 69/171 (40.35%), Postives = 101/171 (59.06%), Query Frame = -3
Query:  405 IVHRDMRPNNILLTHDFEPLVGDFGLAR-WQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKG-QQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGYDVGS 911
            I+HRD++ +NILL  D  P + DFG+AR +  D      +R++GT+GY+APEYA  GQ + K+DVYSFGV+++E+++GRK    +   G Q  LT   R      A+D LVDP + N+    EV   +H   LC++ DP  RP +S V  +L  +TV       PG+ + S
Sbjct:  474 IIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGRKNSSFDESDGAQDLLTHTWRLWTNRTALD-LVDPLIANNCQNSEVVRCIHIGLLCVQEDPAKRPTISTVFMMLTSNTVTLPVPRQPGFFIQS 643          
The following BLAST results are available for this feature:
BLAST of CV885062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 238
Match NameE-valueIdentityDescription
APK1A_ARATH4.370e-3047.40Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
APK2B_ARATH9.735e-3041.48Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y5614_ARATH1.271e-2945.45Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH2.169e-2945.10Probable LRR receptor-like serine/threonine-protei... [more]
Y5129_ARATH2.169e-2938.37Probable LRR receptor-like serine/threonine-protei... [more]
NAK_ARATH2.169e-2944.87Probable serine/threonine-protein kinase NAK OS=Ar... [more]
LRKA3_ARATH2.169e-2939.77Lectin-domain containing receptor kinase A4.3 OS=A... [more]
Y5457_ARATH8.241e-2943.79Probable LRR receptor-like serine/threonine-protei... [more]
LRKA2_ARATH1.406e-2840.94Lectin-domain containing receptor kinase A4.2 OS=A... [more]
CRK8_ARATH1.836e-2840.35Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012D03_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885062 ID=CV885062; Name=CV885062; organism=Citrus sinensis; type=EST; length=928bp
ATACTCTCAGCTTCCTCCATTTTTTCGAAAGAATTACAAAAGCTTAACTT
TGCCTACTTTCCCTACCACTATACATGAGCAAAATATAGATGGACATTGG
GGAAAAAATAGAAAGAACCTAGAACTGGGTAAAAGGGAAAAAGGGGATTA
CAAAAGGACCAAAATACGTATTTAGCAGAATACTAGTTGATATGAAATAC
TAGTTGATATGAAAGGTAAGCTCTTTACAGATCATTTTCGCGGGAGGTCC
TTCTGGCCTTATCCCTTTCCCAAAAGGCTGCCTTTAGTGAATCAAGGGGG
AGCTTCCTACCGAATCCTTCCAAAGCCTCATTCATCAAGGGACCGCTATA
AGGTAGTTGCTGTTGCTGATGCTGCTGCTGCTCTACCCAGATCCGTCCAC
TCCGGCTGCCAACATCATACCCAGGTGTTGACATGTAAGTGTCTATGACC
GTGTCACCTTCCAATATGCGAAGCACCTGTGACATGCGGGGCCTGGAATG
AGGATCGCGCCTTATACACAAAGATGCAGCATGAAGCATGCAATATACTT
CATGTTCAGAATAGTGATTCCCTAGCCTTGGGTCAACCAGTTCATCTATA
GCATATTCTTCAAGAAGCGGACGTGCCCATTCGGTAAGACACTGTTGGCC
CTTTGGTCGGTTGAGGTCCACTGCTTTTCGTCCGGTAACAAGCTCAACTA
ATACCACACCAAATGAATAGACATCAGCTTTTTCAGTAATCTGGCCACTT
TGAGCATATTCCGGCGCCAAATACCCAAATGTTCCCATTACTCTTGTTTC
CACACCCATGTCACCATCANGCTGCCACCTTGCAAGGCCAAAATCTCCAA
CCAGTGGTTCAAAATCATGGGTGAGAAGGATGTTATTTGGTCGCATGTCA
CGATGCACAATGCAGCCCACTCTGCATT
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