CV885062

Overview
NameCV885062
Unique NameCV885062
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV885062_ssr370 microsatellite CV885062_ssr370:370..381. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.522e-27
Identity = 65/174 (37.36%), Postives = 101/174 (58.05%), Query Frame = -3
Query:  393 IVHRDMRPNNILLTHDFEPLVGDFGLAR-WQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGYDVGSRSGR 911
            I+HRD++ +NILL  D  P + DFG+AR +  D      +R++GT+GY++PEYA  GQ + K+DVYSFGV+++E+++G+K     +  G   L  +A  L       ELVDP +  +   +EV   +H   LC++ DP  RP +S ++ +L  +TV       PG    SR G+
Sbjct:  458 IIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISGKKNSSFYQTDGAHDLVSYAWGLWSNGRPLELVDPAIVENCQRNEVVRCVHIGLLCVQEDPAERPTLSTIVLMLTSNTVTLPVPRQPGLFFQSRIGK 631          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 120.939 bits (302), Expect = 1.007e-26
Identity = 62/156 (39.74%), Postives = 94/156 (60.26%), Query Frame = -3
Query:  459 GC---IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILE 917
            GC   I+HRD++ +NILL  +F   + DFGLAR     +  V T ++GT GY+ PEY Q+   T K DVYSFGVVL+EL+T ++ VD+ +PKG + L  W   +  E    E+ DP + +  ++ E++ +L  A LC+  +P  RP   Q++  L+
Sbjct:  851 GCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCKPKGCRDLISWVVKMKHESRASEVFDPLIYSKENDKEMFRVLEIACLCLSENPKQRPTTQQLVSWLD 1006          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.316e-26
Identity = 64/157 (40.76%), Postives = 95/157 (60.51%), Query Frame = -3
Query:  459 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGD-MGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDE-----LVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILE 911
            +++RD + +N+LL   F P + DFGLAR   DGD   V T  +GT GY APEY Q+G +  K+DVYSFGVVL E++TGR+ ++ N+P  ++ L +W    ++EY  D      +VDPRL N+Y       +   A LC++++   RP M  V+  L+
Sbjct:  214 VIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEIITGRRTIERNKPVAERRLLDW----VKEYPADSQRFSMIVDPRLRNNYPAAGARSLAKLADLCLKKNDKERPTMEIVVERLK 366          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.316e-26
Identity = 59/153 (38.56%), Postives = 95/153 (62.09%), Query Frame = -3
Query:  459 IVHRDMRPNNILLTHDFEPLVGDFGLARW-QXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARP-LLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILE 911
            +++RD + +NILL  +++  + DFGLA+    D    V TR+MGT+GY APEY  +G +  K+DV++FGVVL+E++TG  A +  RP+GQ+ L +W RP L  ++ + +++D  +   Y+      M      CI  DP +RP M +V+ +LE
Sbjct:  214 VIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEVVEVLE 366          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.316e-26
Identity = 64/167 (38.32%), Postives = 96/167 (57.49%), Query Frame = -3
Query:  417 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVET-RVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQC-LTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGY 911
            I+HRD++ +NILL  D  P + DFG+AR   D      T RV+GTFGY+ PEY   GQ + K+DVYSFGV+++E+V+GRK     +  G  C L  +   L    +  ELVDP +   Y + EV   +H   LC++ +P +RP +S + ++L   ++       PG+
Sbjct:  470 IIHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPPEYVAHGQFSTKSDVYSFGVLILEIVSGRKNSSFYQMDGSVCNLVTYVWRLWNTDSSLELVDPAISGSYEKDEVTRCIHIGLLCVQENPVNRPALSTIFQMLTNSSITLNVPQPPGF 636          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.316e-26
Identity = 65/173 (37.57%), Postives = 98/173 (56.65%), Query Frame = -3
Query:  399 IVHRDMRPNNILLTHDFEPLVGDFGLAR-WQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQ-QCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGYDVGSRS 911
            I+HRD++  NILL  D  P + DFG+AR ++ D       RV+GTFGY+ PEY  +GQ + K+DVYSFGV+++E++ G+K+   +   G    L  +   L    +  ELVDP +G  Y + EV   +H + LC++ +P  RP MS V ++L    +       PG+    RS
Sbjct:  456 IIHRDLKAGNILLDVDMNPKIADFGVARNFRVDQTEATTGRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEIIVGKKSSSFHEIDGSVGNLVTYVWRLWNNESFLELVDPAMGESYDKDEVIRCIHISLLCVQENPADRPTMSTVFQMLTNTFLTLPVPQLPGFVFRVRS 628          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.718e-26
Identity = 66/173 (38.15%), Postives = 98/173 (56.65%), Query Frame = -3
Query:  396 IVHRDMRPNNILLTHDFEPLVGDFGLAR-WQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGYDVGSRSG 911
            I+HRD++ +NILL  D  P + DFG+AR +  D      +R++GT+GY++PEYA  GQ + K+DVYSFGV+++E+++GRK          Q L   A  L       +LVDP + +   + EV    H   LC++ DP  RP MS +  +L  +T+       PG+ V SR G
Sbjct:  457 IIHRDLKASNILLDADMNPKIADFGMARIFGMDQTQQNTSRIVGTYGYMSPEYAMRGQFSMKSDVYSFGVLVLEIISGRKNNSFIETDDAQDLVTHAWRLWRNGTALDLVDPFIADSCRKSEVVRCTHIGLLCVQEDPVKRPAMSTISVMLTSNTMALPAPQQPGFFVRSRPG 629          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.718e-26
Identity = 65/173 (37.57%), Postives = 98/173 (56.65%), Query Frame = -3
Query:  399 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVET-RVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQ-QCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGYDVGSRS 911
            I+HRD++ +NILL  +  P + DFGLAR          T RV+GTFGY+ PEY  +GQ + K+DVYSFGV+++E++ G+K    ++  G    L      L    ++ ELVDP +G +Y + EV   +H   LC++ +P  RP MS + R+L   ++       PG+    RS
Sbjct:  484 IIHRDLKASNILLDAEMNPKIADFGLARNFRVNQTEANTGRVVGTFGYMPPEYVANGQFSTKSDVYSFGVLILEIIGGKKNSSFHQIDGSVSNLVTHVWRLRNNGSLLELVDPAIGENYDKDEVIRCIHIGLLCVQENPDDRPSMSTIFRMLTNVSITLPVPQPPGFFFRERS 656          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.244e-26
Identity = 66/170 (38.82%), Postives = 98/170 (57.65%), Query Frame = -3
Query:  405 IVHRDMRPNNILLTHDFEPLVGDFGLAR-WQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGYDVGS 911
            I+HRD++ +NILL  D  P + DFGLAR +  D      +R++GTFGY+APEYA  GQ + K+DVYSFGV+++E+++G+K        G   L   A  L       +LVDP + ++  + EV   +H   LC++ DP  RP +S +  +L  +TV       PG+ V S
Sbjct:  458 IIHRDLKASNILLDADMNPKLADFGLARIFGMDQTQENTSRIVGTFGYMAPEYAIHGQFSVKSDVYSFGVLVLEIISGKKNNSFYETDGAHDLVTHAWRLWSNGTALDLVDPIIIDNCQKSEVVRCIHICLLCVQEDPAERPILSTIFMMLTSNTVTLPVPLQPGFPVQS 627          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.244e-26
Identity = 62/174 (35.63%), Postives = 100/174 (57.47%), Query Frame = -3
Query:  402 IVHRDMRPNNILLTHDFEPLVGDFGLAR-WQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRK---AVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGYDVGSR 911
            I+HRD++ +NILL  D  P + DFGLA  +  +   G   R+ GT+ Y++PEYA  GQ + K+D+YSFGV+++E+++G+K      ++       L  +A  L    +  ELVDP  G +Y  +EV   +H A LC++ +P  RP +S ++ +L  +T+       PG+   SR
Sbjct:  471 IIHRDLKASNILLDADMNPKIADFGLATIFGVEQTQGNTNRIAGTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIISGKKNSGVYQMDETSTAGNLVTYASRLWRNKSPLELVDPTFGRNYQSNEVTRCIHIALLCVQENPEDRPMLSTIILMLTSNTITLPVPRLPGFFPRSR 644          
The following BLAST results are available for this feature:
BLAST of CV885062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 238
Match NameE-valueIdentityDescription
CRK10_ARATH4.522e-2737.36Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
PSKR1_ARATH1.007e-2639.74Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
Y5707_ARATH1.316e-2640.76Probable receptor-like protein kinase At5g47070 OS... [more]
CX32_ARATH1.316e-2638.56Probable serine/threonine-protein kinase Cx32, chl... [more]
CRK30_ARATH1.316e-2638.32Putative cysteine-rich receptor-like protein kinas... [more]
CRK16_ARATH1.316e-2637.57Putative cysteine-rich receptor-like protein kinas... [more]
CRK7_ARATH1.718e-2638.15Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
CRK21_ARATH1.718e-2637.57Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
CRK15_ARATH2.244e-2638.82Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
CRK11_ARATH2.244e-2635.63Cysteine-rich receptor-like protein kinase 11 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012D03_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885062 ID=CV885062; Name=CV885062; organism=Citrus sinensis; type=EST; length=928bp
ATACTCTCAGCTTCCTCCATTTTTTCGAAAGAATTACAAAAGCTTAACTT
TGCCTACTTTCCCTACCACTATACATGAGCAAAATATAGATGGACATTGG
GGAAAAAATAGAAAGAACCTAGAACTGGGTAAAAGGGAAAAAGGGGATTA
CAAAAGGACCAAAATACGTATTTAGCAGAATACTAGTTGATATGAAATAC
TAGTTGATATGAAAGGTAAGCTCTTTACAGATCATTTTCGCGGGAGGTCC
TTCTGGCCTTATCCCTTTCCCAAAAGGCTGCCTTTAGTGAATCAAGGGGG
AGCTTCCTACCGAATCCTTCCAAAGCCTCATTCATCAAGGGACCGCTATA
AGGTAGTTGCTGTTGCTGATGCTGCTGCTGCTCTACCCAGATCCGTCCAC
TCCGGCTGCCAACATCATACCCAGGTGTTGACATGTAAGTGTCTATGACC
GTGTCACCTTCCAATATGCGAAGCACCTGTGACATGCGGGGCCTGGAATG
AGGATCGCGCCTTATACACAAAGATGCAGCATGAAGCATGCAATATACTT
CATGTTCAGAATAGTGATTCCCTAGCCTTGGGTCAACCAGTTCATCTATA
GCATATTCTTCAAGAAGCGGACGTGCCCATTCGGTAAGACACTGTTGGCC
CTTTGGTCGGTTGAGGTCCACTGCTTTTCGTCCGGTAACAAGCTCAACTA
ATACCACACCAAATGAATAGACATCAGCTTTTTCAGTAATCTGGCCACTT
TGAGCATATTCCGGCGCCAAATACCCAAATGTTCCCATTACTCTTGTTTC
CACACCCATGTCACCATCANGCTGCCACCTTGCAAGGCCAAAATCTCCAA
CCAGTGGTTCAAAATCATGGGTGAGAAGGATGTTATTTGGTCGCATGTCA
CGATGCACAATGCAGCCCACTCTGCATT
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