CV885062

Overview
NameCV885062
Unique NameCV885062
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV885062_ssr370 microsatellite CV885062_ssr370:370..381. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.455e-25
Identity = 61/151 (40.40%), Postives = 90/151 (59.60%), Query Frame = -3
Query:  459 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILE 911
            I+HRD++ +NILL+  F   + DFGLAR     D  V T ++GT GY+ PEY Q+   T K DVYSFGVVL+EL+TGR+ +D+ +P+G + L  W   +  E    E+ DP + +     E+  +L  A  C+  +P +RP   Q++  LE
Sbjct:  865 ILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWVLQMKTEKRESEIFDPFIYDKDHAEEMLLVLEIACRCLGENPKTRPTTQQLVSWLE 1015          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.455e-25
Identity = 60/168 (35.71%), Postives = 102/168 (60.71%), Query Frame = -3
Query:  414 IVHRDMRPNNILLTHDFEPLVGDFGLAR-WQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNR-PKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGYD 911
            I+HRD++ +NILL  + EP V DFG+AR ++ D       RV+GT GY++PEY   GQ + K+DVYSFGV+++E+++G++  + +   +  + L  +A       +  ELVD  L  +Y  +EV+  +H A LC++ DP  RP +S ++ +L  +++      +P Y+
Sbjct:  442 IIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADTRRVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISGKRNSNFHETDESGKNLVTYAWRHWRNGSPLELVDSELEKNYQSNEVFRCIHIALLCVQNDPEQRPNLSTIIMMLTSNSITLPVPQSPVYE 609          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.900e-25
Identity = 65/153 (42.48%), Postives = 90/153 (58.82%), Query Frame = -3
Query:  459 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAV--DLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILE 911
            I+HRD++ +NILL  DFEP V DFGLAR     +  V T + GTFGY+ PEY QS + T K DVYSFGV+L+ELVTG++    D    +G   L  WA   + +    +++DP L +   ++    +L  A LC+   P  RP M  VL+ L+
Sbjct: 1039 IIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGGN-LVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALK 1190          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.481e-25
Identity = 63/172 (36.63%), Postives = 93/172 (54.07%), Query Frame = -3
Query:  402 IVHRDMRPNNILLTHDFEPLVGDFGLAR-WQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDL-NRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGYDVGSR 911
            I+HRD++ +NILL  D  P + DFG+AR +  D       R+ GTFGY++PEYA  G  + K+DVYSFGV+++E+++G+K     N       L   A  L    +  ELVDP +G  Y   E    +H A LC++ DP  RP +  ++ +L   T        PG+ +  R
Sbjct:  466 IIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEIISGKKNSSFYNIDDSGSNLVTHAWRLWRNGSPLELVDPTIGESYQSSEATRCIHIALLCVQEDPADRPLLPAIIMMLTSSTTTLHVPRAPGFCLSGR 637          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.241e-25
Identity = 61/154 (39.61%), Postives = 93/154 (60.39%), Query Frame = -3
Query:  471 GC---IVHRDMRPNNILLTHDFEPLVGDFGLAR-WQXDGDMG-VETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVL 917
            GC   +VHRD++  NILL  +F+  + DFGL+R +Q  GD   V T V GT GYL PEY  + +++EK+DVYSFG++L+E++T ++ +D  R      + EW   ++++    ++VDP+L  +Y  H V+  L  A  C       RP MSQV+
Sbjct:  682 GCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVIDQTRENPN--IAEWVTFVIKKGDTSQIVDPKLHGNYDTHSVWRALEVAMSCANPSSVKRPNMSQVI 833          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.233e-25
Identity = 64/154 (41.56%), Postives = 95/154 (61.69%), Query Frame = -3
Query:  459 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMG-VETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEH--EVYCMLHAASLCIRRDPHSRPRMSQVLRILE 911
            IVHRD++ NNIL+  DFEP + DFGLA+   +GD+G     V G++GY+APEY  S +ITEK+DVYS+GVV++E++TG++ +D   P+G   L +W R   +     E++D  L +       E+  +L  A LC+   P  RP M  V  +L+
Sbjct:  915 IVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEGIH-LVDWVR---QNRGSLEVLDSTLRSRTEAEADEMMQVLGTALLCVNSSPDERPTMKDVAAMLK 1064          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 5.528e-25
Identity = 60/167 (35.93%), Postives = 95/167 (56.89%), Query Frame = -3
Query:  417 IVHRDMRPNNILLTHDFEPLVGDFGLAR-WQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKG-QQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGY 911
            I+HRD++ +NILL  D  P + DFG+AR +  D  +    RV+GTFGY++PEY   GQ + K+DVYSFGV+++E+++G+K     +  G    L  +   L E   + EL+DP +       EV   +H   LC++ +P  RP MS + ++L   ++       PG+
Sbjct:  480 IIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTARVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKTMHELIDPFIKEDCKSDEVIRYVHIGLLCVQENPADRPTMSTIHQVLTTSSITLPVPQPPGF 646          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.220e-25
Identity = 61/167 (36.53%), Postives = 98/167 (58.68%), Query Frame = -3
Query:  417 IVHRDMRPNNILLTHDFEPLVGDFGLAR-WQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQ-QCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGY 911
            I+HRD++  NILL  D  P V DFG+AR ++ D       RV+GT+GY++PEYA  GQ + K+DVYSFGV+++E+++GRK   L +       L  +   L  + +  +LVD    + Y  +E+   +H A LC++ D  +RP MS ++++L   ++       PG+
Sbjct:  461 IIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGRKNSSLYQMDASFGNLVTYTWRLWSDGSPLDLVDSSFRDSYQRNEIIRCIHIALLCVQEDTENRPTMSAIVQMLTTSSIALAVPQPPGF 627          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.220e-25
Identity = 60/156 (38.46%), Postives = 92/156 (58.97%), Query Frame = -3
Query:  447 IVHRDMRPNNILLTHDFEPLVGDFGLAR-WQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTV 911
            I+HRD++ +NILL  D  P + DFG+AR +  D       R++GT+GY++PEYA  G+ + K+DVYSFGV+++EL+TG+K        G   L  +   L  E +  ELVD  +  ++  +EV   +H A LC++ D   RP M  +L ++   TV
Sbjct:  468 IIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANTKRIVGTYGYMSPEYAIHGKYSVKSDVYSFGVLVLELITGKKNSSFYEEDGLGDLVTYVWKLWVENSPLELVDEAMRGNFQTNEVIRCIHIALLCVQEDSSERPSMDDILVMMNSFTV 623          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 9.429e-25
Identity = 59/165 (35.76%), Postives = 88/165 (53.33%), Query Frame = -3
Query:  417 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGY 911
            I+HRD++ +NILL  +  P + DFGL R          T + GT GYLAPEY   GQ+TEKADVY+FGV+++E+VTG+K     +       + W     +   +D  +DPRL   + E E   +L    LC++     RP MS+++ +L+       Y   P +
Sbjct:  439 IIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTSSVLYSVWEH--FKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSVELRPSMSEIVFMLQNKDSKFEYPKQPPF 601          
The following BLAST results are available for this feature:
BLAST of CV885062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 238
Match NameE-valueIdentityDescription
PSKR1_DAUCA1.455e-2540.40Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
CRK33_ARATH1.455e-2535.71Putative cysteine-rich receptor-like protein kinas... [more]
EXS_ARATH1.900e-2542.48Leucine-rich repeat receptor protein kinase EXS OS... [more]
CRK35_ARATH2.481e-2536.63Putative cysteine-rich receptor-like protein kinas... [more]
MEE39_ARATH3.241e-2539.61Probable LRR receptor-like serine/threonine-protei... [more]
RCH2_ARATH4.233e-2541.56Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
CRK17_ARATH5.528e-2535.93Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
CRK5_ARATH7.220e-2536.53Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK25_ARATH7.220e-2538.46Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
CRK1_ARATH9.429e-2535.76Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012D03_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885062 ID=CV885062; Name=CV885062; organism=Citrus sinensis; type=EST; length=928bp
ATACTCTCAGCTTCCTCCATTTTTTCGAAAGAATTACAAAAGCTTAACTT
TGCCTACTTTCCCTACCACTATACATGAGCAAAATATAGATGGACATTGG
GGAAAAAATAGAAAGAACCTAGAACTGGGTAAAAGGGAAAAAGGGGATTA
CAAAAGGACCAAAATACGTATTTAGCAGAATACTAGTTGATATGAAATAC
TAGTTGATATGAAAGGTAAGCTCTTTACAGATCATTTTCGCGGGAGGTCC
TTCTGGCCTTATCCCTTTCCCAAAAGGCTGCCTTTAGTGAATCAAGGGGG
AGCTTCCTACCGAATCCTTCCAAAGCCTCATTCATCAAGGGACCGCTATA
AGGTAGTTGCTGTTGCTGATGCTGCTGCTGCTCTACCCAGATCCGTCCAC
TCCGGCTGCCAACATCATACCCAGGTGTTGACATGTAAGTGTCTATGACC
GTGTCACCTTCCAATATGCGAAGCACCTGTGACATGCGGGGCCTGGAATG
AGGATCGCGCCTTATACACAAAGATGCAGCATGAAGCATGCAATATACTT
CATGTTCAGAATAGTGATTCCCTAGCCTTGGGTCAACCAGTTCATCTATA
GCATATTCTTCAAGAAGCGGACGTGCCCATTCGGTAAGACACTGTTGGCC
CTTTGGTCGGTTGAGGTCCACTGCTTTTCGTCCGGTAACAAGCTCAACTA
ATACCACACCAAATGAATAGACATCAGCTTTTTCAGTAATCTGGCCACTT
TGAGCATATTCCGGCGCCAAATACCCAAATGTTCCCATTACTCTTGTTTC
CACACCCATGTCACCATCANGCTGCCACCTTGCAAGGCCAAAATCTCCAA
CCAGTGGTTCAAAATCATGGGTGAGAAGGATGTTATTTGGTCGCATGTCA
CGATGCACAATGCAGCCCACTCTGCATT
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