CV885062

Overview
NameCV885062
Unique NameCV885062
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV885062_ssr370 microsatellite CV885062_ssr370:370..381. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.174e-23
Identity = 61/174 (35.06%), Postives = 95/174 (54.60%), Query Frame = -3
Query:  399 IVHRDMRPNNILLTHDFEPLVGDFGLAR-WQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNR--PKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDTYMSTPGYDVGSRS 911
            I+HRD++ +NILL  D  P + DFG+AR ++ D       RV+GTFGY+ PEY   GQ + K+DVYSFGV+++E+V G+K     +    G   +T   R    +  +D L+DP +       +V   +H   LC++  P  RP MS + ++L   ++       PG+   +RS
Sbjct:  450 IIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDNTRRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFYKIDDSGGNLVTHVWRLWNNDSPLD-LIDPAIEESCDNDKVIRCIHIGLLCVQETPVDRPEMSTIFQMLTNSSITLPVPRPPGFFFRNRS 622          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.758e-23
Identity = 61/152 (40.13%), Postives = 86/152 (56.58%), Query Frame = -3
Query:  459 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGD-MGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILE 911
            I+HRD++  NILL  +F   + DFGL++     D   V T V G+FGYL PEY +  Q+TEK+DVYSFGVVL E V  R  ++   PK Q  L EWA    ++  ++ ++D  L  +YS   +      A  C+  +  +RP M +VL  LE
Sbjct:  640 IIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWALSWQKQRNLESIIDSNLRGNYSPESLEKYGEIAEKCLADEGKNRPMMGEVLWSLE 791          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.758e-23
Identity = 61/157 (38.85%), Postives = 90/157 (57.32%), Query Frame = -3
Query:  459 GC---IVHRDMRPNNILLTHDFEPLVGDFGLAR-WQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILE 917
            GC   IVHRD++  NILL    +  + DFGL+R +   G+  + T V GT GYL PEY Q+ ++ EK+DVYSFG+VL+E++T +  +D +R K    +++W    L    I +++DP L   Y    V+ +L  A  C      +RP MSQV   L+
Sbjct:  695 GCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVIDQSRSKSH--ISQWVGFELTRGDITKIMDPNLNGDYESRSVWRVLELAMSCANPSSVNRPNMSQVANELK 849          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.153e-22
Identity = 67/173 (38.73%), Postives = 94/173 (54.34%), Query Frame = -3
Query:  417 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDE-----LVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRIL---EGDTVIDTYMSTPGY 911
            IVHRD++ +N+LL       V DFGLAR    GD  V T + GT GY+APEY Q+ Q T + DVYS+GV+ +EL TGR+AVD     G++CL EWAR ++      +     L   + GN     ++  +L     C    P +RP M +VL +L    G   +   +S+ GY
Sbjct:  937 IVHRDVKASNVLLDKHGNARVTDFGLARLLNVGDSHVSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGRRAVD----GGEECLVEWARRVMTGNMTAKGSPITLSGTKPGN--GAEQMTELLKIGVKCTADHPQARPNMKEVLAMLVKISGKAELFNGLSSQGY 1103          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.153e-22
Identity = 58/151 (38.41%), Postives = 85/151 (56.29%), Query Frame = -3
Query:  459 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILE 911
            I+HRD++  NILL  +    V DFG +R        + T V GT GYL PEY  +G + EK+DVYSFGVVL+EL++G KA+   RP+  + L  +    ++E  + E++D ++ N Y++ E+      A  C R     RP M +V   LE
Sbjct:  529 IIHRDVKTANILLDENLTAKVADFGASRLIPMDQEQLTTMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKALCFERPQSSKHLVSYFVSAMKENRLHEIIDGQVMNEYNQREIQESARIAVECTRIMGEERPSMKEVAAELE 679          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.153e-22
Identity = 63/158 (39.87%), Postives = 91/158 (57.59%), Query Frame = -3
Query:  462 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCM--------LHAASLCIRRDPHSRPRMSQVLRIL 911
            I+HRD++ +NILL  +FE  + DFG+A+          T V+GT GY+ PEYA++ +I EK+D+YSFG+VL+EL+TG+KAVD      Q  L++      ++  + E VDP       E  V CM           A LC +R+P  RP M +V R+L
Sbjct:  769 IIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGKKAVDNEANLHQLILSK-----ADDNTVMEAVDP-------EVTVTCMDLGHIRKTFQLALLCTKRNPLERPTMLEVSRVL 914          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.153e-22
Identity = 63/154 (40.91%), Postives = 90/154 (58.44%), Query Frame = -3
Query:  459 IVHRDMRPNNILLTHDFEPLVGDFGLARW--QXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYS-EHEVYCMLHAASLCIRRDPHSRPRMSQVLRILE 911
            I+HRDM+ +N+LL  DFE  V DFG+AR     D  + V T + GT GY+ PEY QS + T K DVYS+GV+L+EL++G+K +D         L  WA+ L  E    E++DP L    S + E++  L  AS C+   P  RP M Q++ + +
Sbjct:  983 IIHRDMKSSNVLLDEDFEARVSDFGMARLVSALDTHLSVST-LAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPGEFGEDNNLVGWAKQLYREKRGAEILDPELVTDKSGDVELFHYLKIASQCLDDRPFKRPTMIQLMAMFK 1135          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.505e-22
Identity = 61/154 (39.61%), Postives = 88/154 (57.14%), Query Frame = -3
Query:  459 IVHRDMRPNNILLTHDFEPLVGDFGLARWQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLH---AASLCIRRDPHSRPRMSQVLRILE 911
            I HRD++ +NILL  + +  V DFGL+R        V T   GT GYL PEY  + Q+T+K+DVYSFGVVL EL+T +KA+D NR +    L  + R  L+E  + +++DP +G   +E E+  M      A LC++     RP M    + +E
Sbjct:  480 IYHRDVKSSNILLDENLDVKVADFGLSRLGVSDVSHVTTCAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVLFELLTCKKAIDFNREEEDVNLVVFVRKALKEGRLMDVIDPVIGIGATEKEIESMKALGVLAELCVKETRQCRPTMQVAAKEIE 633          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.505e-22
Identity = 58/154 (37.66%), Postives = 93/154 (60.39%), Query Frame = -3
Query:  453 IVHRDMRPNNILLTHDFEPLVGDFGLAR-WQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGD 911
            I+HRD++ +NILL  +  P V DFG+AR +  D   G  +RV+GT+GY+APEY + GQ + K+DVYSFGV+L+E+++G K    N+    + L  +A     E  ++ ++DP L N    +E+  ++    LC++ +   RP M+ V+  L  D
Sbjct:  461 IIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEK----NKNFETEGLPAFAWKRWIEGELESIIDPYL-NENPRNEIIKLIQIGLLCVQENAAKRPTMNSVITWLARD 609          
BLAST of CV885062 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.966e-22
Identity = 66/184 (35.87%), Postives = 99/184 (53.80%), Query Frame = -3
Query:  399 GC---IVHRDMRPNNILLTHDFEPLVGDFGLAR-WQXDGDMGVETRVMGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELVDPRLGNHYSEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDTVIDT-------YMSTPGYDVGSRS 917
            GC   +VHRD++  NILL   +   + DFGL+R +  DG+  V T V GT GYL PEY ++  ++EK+DVYSFGVVL+E+VT +   D  R +    + EW   +L +  I  ++DP+L   Y  +  + ++  A  C+    + RP M+ V+  L     ++         M T GY   SRS
Sbjct:  681 GCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKTRERTH--INEWVGSMLTKGDIKSILDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVTELNECVALENARRQGREEMHTSGYVDFSRS 862          
The following BLAST results are available for this feature:
BLAST of CV885062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 238
Match NameE-valueIdentityDescription
CRK32_ARATH5.174e-2335.06Putative cysteine-rich receptor-like protein kinas... [more]
Y1357_ARATH6.758e-2340.13Probable receptor-like protein kinase At1g30570 OS... [more]
PAM74_ARATH6.758e-2338.85Probable LRR receptor-like serine/threonine-protei... [more]
Y1743_ARATH1.153e-2238.73Probable LRR receptor-like serine/threonine-protei... [more]
WAK5_ARATH1.153e-2238.41Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
ERL1_ARATH1.153e-2239.87LRR receptor-like serine/threonine-protein kinase ... [more]
BRL1_ARATH1.153e-2240.91Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
WAKLP_ARATH1.505e-2239.61Wall-associated receptor kinase-like 15 OS=Arabido... [more]
CRK36_ARATH1.505e-2237.66Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
Y5188_ARATH1.966e-2235.87Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012D03_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885062 ID=CV885062; Name=CV885062; organism=Citrus sinensis; type=EST; length=928bp
ATACTCTCAGCTTCCTCCATTTTTTCGAAAGAATTACAAAAGCTTAACTT
TGCCTACTTTCCCTACCACTATACATGAGCAAAATATAGATGGACATTGG
GGAAAAAATAGAAAGAACCTAGAACTGGGTAAAAGGGAAAAAGGGGATTA
CAAAAGGACCAAAATACGTATTTAGCAGAATACTAGTTGATATGAAATAC
TAGTTGATATGAAAGGTAAGCTCTTTACAGATCATTTTCGCGGGAGGTCC
TTCTGGCCTTATCCCTTTCCCAAAAGGCTGCCTTTAGTGAATCAAGGGGG
AGCTTCCTACCGAATCCTTCCAAAGCCTCATTCATCAAGGGACCGCTATA
AGGTAGTTGCTGTTGCTGATGCTGCTGCTGCTCTACCCAGATCCGTCCAC
TCCGGCTGCCAACATCATACCCAGGTGTTGACATGTAAGTGTCTATGACC
GTGTCACCTTCCAATATGCGAAGCACCTGTGACATGCGGGGCCTGGAATG
AGGATCGCGCCTTATACACAAAGATGCAGCATGAAGCATGCAATATACTT
CATGTTCAGAATAGTGATTCCCTAGCCTTGGGTCAACCAGTTCATCTATA
GCATATTCTTCAAGAAGCGGACGTGCCCATTCGGTAAGACACTGTTGGCC
CTTTGGTCGGTTGAGGTCCACTGCTTTTCGTCCGGTAACAAGCTCAACTA
ATACCACACCAAATGAATAGACATCAGCTTTTTCAGTAATCTGGCCACTT
TGAGCATATTCCGGCGCCAAATACCCAAATGTTCCCATTACTCTTGTTTC
CACACCCATGTCACCATCANGCTGCCACCTTGCAAGGCCAAAATCTCCAA
CCAGTGGTTCAAAATCATGGGTGAGAAGGATGTTATTTGGTCGCATGTCA
CGATGCACAATGCAGCCCACTCTGCATT
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