EY665356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_UNCMA (50S ribosomal protein L10e OS=Uncultured methanogenic archaeon RC-I GN=rpl10e PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.774e-17 Identity = 56/166 (33.73%), Postives = 84/166 (50.60%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFPGTHK 532 M R+P R Y++ Y + + GVP K+ +D+G +E P V LV E + +ALEAARI+ N+Y+ GK + +VRV+P VLR NK + AGA D F K+ T ARV G+G+ F++ + KEA+ R + P ++ Sbjct: 1 MARKPGRMYKKFSGPAYTRREYMGGVPGVKVAQFDMGNL---TEELPIAVTLVVNETCQIRHDALEAARISANRYLLNDVGKTNYRFKVRVYPHQVLRENKQATGAGADRVSDGMRRAFGKA-VGTAARVYEGQGV-FTIWVNRANFEKAKEAMRRAGHKLPTPYR 161
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_META3 (50S ribosomal protein L10e OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl10e PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.623e-17 Identity = 60/162 (37.04%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFP 520 M RP++CYR+I Y + ++ R VP PK+ Y G KG D FP VHLV + + ALE+ARI NKY G+ + ++RV+P VLR NKM S AGA D F K+ T ARV G+ + ++ KEA+ R + P Sbjct: 1 MALRPSKCYREINKPAYTRKKYIRAVPQPKVVHYVNG--NKGGD-FPVEVHLVVKDDIQIRHNALESARIVGNKYTQNKCGRLGYKFQIRVYPHQVLRENKMASGAGADRISDGMRLSFGKA-VGTAARVRKGQKI-ITISTTPENVIHAKEALRRCNMKMP 157
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_METM5 (50S ribosomal protein L10e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl10e PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 6.179e-17 Identity = 57/162 (35.19%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFP 520 M RPARCYR + + Y + + R VP PK+ Y +G EFP V LVS + ALE++RIA NKY+ G+ + +RV+P +LR NKM + AGA D F K+ T A+V G+ + ++G + KEA+ R + P Sbjct: 1 MALRPARCYRTTERRSYTRKEYVRAVPQPKVVHYVMGNSSV---EFPVEVQLVSKSDILIRHNALESSRIAGNKYIMGECGRTGYLFNIRVYPHEILRENKMAAGAGADRISDGMRLSFGKA-VGTAAKVKKGQEI-ITIGVNPERFYAAKEALRRCSMKLP 157
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_METBU (50S ribosomal protein L10e OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl10e PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.798e-16 Identity = 52/162 (32.10%), Postives = 88/162 (54.32%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFP 520 M R+PA YR +K++ + + ++ GVP ++ +D+G K +FP + L++ E+ + ALEAARI N+ M AG+ FH+++RV+P VLR NK + AGA + K+ T ARV+ + + F++ K + K+A+ R + P Sbjct: 1 MVRKPASMYRNVKSRSFTRRKYMGGVPGSQVIHFDMGNKTA---DFPVKITLLADERCQIRHTALEAARITANRAMTTAAGRSGFHMKLRVYPHEVLRENKQATGAGADRVSSGMRAAYGKN-VSTAARVSARQKI-FTISVNKEHFIIAKDALRRAGQKLP 157
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_METMJ (50S ribosomal protein L10e OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.348e-16 Identity = 56/162 (34.57%), Postives = 84/162 (51.85%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFP 520 M R+PA+ YR + K Y + + GVP KI +D+G +++P + +V E + ALEAARI N+ + K G+ FHL++R P HVLR NK + AGA + F K+ T ARV G+ + FSV K ++ RG+++ P Sbjct: 1 MVRKPAKMYRNLAKKAYTRREYMGGVPGSKIVQFDMGNL---TEDYPVELSIVVDETCQIRHTALEAARIGINRQLQKEVGRANFHLKIRTFPHHVLRENKQATGAGADRVSEGMRLAFGKA-VGTAARVEKGQKV-FSVWTSPQYVDKAKVSLKRGIYKLP 157
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_METLZ (50S ribosomal protein L10e OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl10e PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.522e-15 Identity = 54/162 (33.33%), Postives = 85/162 (52.47%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAIHRGLFQFP 520 M R+PAR YR + K Y + + GVP K+ +D+G ++FP +HL + E + A+EAARI N+ + K G++ FHL++R +P HVLR +K + AGA + F K+ T ARVA + + F+V K+A+ ++ P Sbjct: 1 MVRKPARMYRNLAKKAYCRREYMGGVPGLKVVQFDMGNLS---EDFPVAIHLEALEACQIRHTAMEAARINMNRRLMKTVGRNNFHLKIRAYPHHVLREHKQATGAGADRVSEGMRLAFGKA-VGTAARVAPRQRV-FTVWTTPQYVDQAKDALLHSGYKLP 157
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_THEAC (50S ribosomal protein L10e OS=Thermoplasma acidophilum GN=rpl10e PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.988e-15 Identity = 58/158 (36.71%), Postives = 83/158 (52.53%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFS----VGCRKVKTTLVKEAI 496 M +PAR Y +I Y + F GVP PKI + G +KK +FP + LV+ E + ALEAAR++ N+ M + AG D F+L+V +P HVLR +KM + AGA F + P T ARV + + + +++KT L K AI Sbjct: 1 MVTKPARMYSRITGPAYTRKEFMGGVPYPKITTFVQGNQKK---DFPIEMRLVAEEPCQIRHTALEAARVSVNRRMTEAAGLDYFYLKVVPYPHHVLREHKMATGAGADRISSGMRAAFGR-PVGTAARVYPDDVIMIARTDEAHAKELKTALRKAAI 154
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_THEVO (50S ribosomal protein L10e OS=Thermoplasma volcanium GN=rpl10e PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.428e-15 Identity = 57/158 (36.08%), Postives = 80/158 (50.63%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGE----GLCFSVGCRKVKTTLVKEAI 496 M +PAR Y +I Y + F GVP PKI + G +K+ +FP + L++ E V ALEAAR++ N+ M + AG D F+L+V +P HVLR +KM + AGA F + P T ARV + G ++K L K AI Sbjct: 1 MVTKPARMYTRITGPAYTRKEFMGGVPYPKITTFVQGNQKR---DFPIEMQLIAMESCQVRHTALEAARVSVNRRMTEAAGLDNFYLKVVPYPHHVLREHKMATGAGADRISSGMRAAFGR-PVGTAARVYQNDVIMIGRTDEAHAHELKIALKKAAI 154
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_METMA (50S ribosomal protein L10e OS=Methanosarcina mazei GN=rpl10e PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.428e-15 Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEAI-HRG 505 M R+P YR ++ + + + ++ GVP ++ YD+G K FP + LV+ EK + ALEAARI N+++ AGK F++++RV+P VLR NK + AGA F K+ T ARV + + L F+V K K+A+ H G Sbjct: 1 MVRKPGSMYRNVRQRSFTRRKYMGGVPGSQVIHYDMGDKANTT--FPVKISLVAEEKCQIRHTALEAARITANRHLVADAGKMGFYMKLRVYPHEVLRENKQATGAGADRVSSGMRRAFGKN-VGTAARVNSMQKL-FTVAVEKQNFPAAKKALWHAG 154
BLAST of EY665356 vs. ExPASy Swiss-Prot
Match: RL10_METS5 (50S ribosomal protein L10e OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl10e PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.288e-14 Identity = 53/154 (34.42%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 35 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDA-FHLRVRVHPFHVLRINKMLSCAGAGSAPDWNEGGFLKSPKETCARVANGEGLCFSVGCRKVKTTLVKEA 493 M RP RCYR Y + + GVP PKI + +G KK ++ F V L++ + + ALEAAR+ K M G + F+L V +P HV+R NKM++ AGA D F K P T AR+ L ++ +K K+A Sbjct: 1 MPLRPGRCYRHFSGPAYTRKEYIPGVPQPKITKFTMGDHKK---DYDFEVRLLTKQIGQIRHNALEAARVIALKQMTSMVGNETDFYLYVTKYPHHVIRENKMMAFAGADRLQDGMRLSFGK-PIGTAARITKLGDLIMAIRVKKEHLEFAKKA 150 The following BLAST results are available for this feature:
BLAST of EY665356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665356 ID=EY665356; Name=EY665356; organism=Citrus sinensis; type=EST; length=992bpback to top |