CV885048

Overview
NameCV885048
Unique NameCV885048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1001 contig Csv1_Contig1001:787..1584. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_CANGA (Elongation factor 2 OS=Candida glabrata GN=EFT1 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.067e-51
Identity = 94/149 (63.09%), Postives = 117/149 (78.52%), Query Frame = -2
Query:  351 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 797
            HADAIHRG GQ++PT RR  YA  L A+P++ EPV++VEIQ PEQA+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  ++SDPL+P ++A ++V   RKR G+KE++    E+ DKL
Sbjct:  694 HADAIHRGAGQIMPTMRRATYAGFLLAEPKIQEPVFLVEIQCPEQAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLNSDPLDPTSKAGEIVTAARKRHGMKEEVPGWQEYYDKL 842          
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_SACCA (Elongation factor 2 OS=Saccharomyces castellii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.924e-51
Identity = 95/149 (63.76%), Postives = 115/149 (77.18%), Query Frame = -2
Query:  351 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 797
            HADAIHRGGGQ+IPT RR  YA  L A+P++ EPV++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  + SDPL+P ++A ++V   RKR G+KE +    E+ DKL
Sbjct:  694 HADAIHRGGGQIIPTMRRATYAGFLLAEPKIQEPVFLVEIQCPESAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLGSDPLDPTSKAGEIVTAARKRHGMKEVVPGWQEYYDKL 842          
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_PICPA (Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.352e-50
Identity = 93/149 (62.42%), Postives = 117/149 (78.52%), Query Frame = -2
Query:  351 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 797
            HADAIHRGGGQVIPT +RV YA+ L A+P + EP+++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT+GQAFPQ VFDHW  M+ +PL+P ++  ++V   RKR+G+KE +    E+ DKL
Sbjct:  694 HADAIHRGGGQVIPTMKRVTYAAFLLAEPAIQEPIFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFTGELRQATAGQAFPQMVFDHWANMNGNPLDPASKVGEIVLAARKRQGMKENVPGYEEYYDKL 842          
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_CRYPV (Elongation factor 2 OS=Cryptosporidium parvum PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.765e-50
Identity = 91/149 (61.07%), Postives = 118/149 (79.19%), Query Frame = -2
Query:  351 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 797
            HADAIHRG GQ+ PT RRV+YA+ LTA PRLLEP+++VEI AP++ +GGIY+ LNQ+RGHVF E  + GTP   IKAYLPV +SF F+  LRAATSG+AFPQCVFDHW++++ DPLE G++  +LV  IR+RK +KE++  L  + DKL
Sbjct:  684 HADAIHRGAGQITPTCRRVMYAAALTASPRLLEPMFLVEISAPQEVVGGIYATLNQRRGHVFHEEPKSGTPQVEIKAYLPVADSFKFTTVLRAATSGKAFPQCVFDHWELINGDPLEKGSKTEELVKAIRRRKNIKEEIPALDNYLDKL 832          
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_DEBHA (Elongation factor 2 OS=Debaryomyces hansenii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.494e-49
Identity = 91/149 (61.07%), Postives = 114/149 (76.51%), Query Frame = -2
Query:  351 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 797
            HADAIHRGGGQ+IPT RRV YAS L A+P + EPV++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGFSG LR +T GQAFPQ +FDHW  ++ DP +P ++   +V + R+R+G+K  +    E+ DKL
Sbjct:  694 HADAIHRGGGQIIPTMRRVTYASMLLAEPAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFSGELRQSTGGQAFPQLIFDHWANLNGDPTDPTSKVGTIVKEKRERQGMKPDVPGYEEYYDKL 842          
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_CANAL (Elongation factor 2 OS=Candida albicans GN=EFT2 PE=1 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 4.348e-49
Identity = 92/149 (61.74%), Postives = 113/149 (75.84%), Query Frame = -2
Query:  351 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 797
            HADAIHRGGGQ+IPT RRV YAS L A+P + EPV++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ +FDHW +MS D  +  ++   +V + R R GLK ++   +E+ DKL
Sbjct:  694 HADAIHRGGGQIIPTMRRVTYASMLLAEPAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQLIFDHWQVMSGDVTDENSKPGAIVKEKRVRAGLKPEVPEYTEYYDKL 842          
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_PICGU (Elongation factor 2 OS=Pichia guilliermondii GN=EFT2 PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.686e-49
Identity = 93/149 (62.42%), Postives = 113/149 (75.84%), Query Frame = -2
Query:  351 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 797
            HADAIHRGGGQ+IPT RRV YAS L A+P + EPV++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGFSG LR AT GQAFPQ VFDHW ++S D  +P ++   +    R+R+GLK ++    E+ DKL
Sbjct:  694 HADAIHRGGGQIIPTMRRVTYASMLLAEPAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFSGDLRQATGGQAFPQLVFDHWAVLSGDVTDPTSKPGIIAKAKRERQGLKPEVPGYEEYYDKL 842          
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_ENTHI (Elongation factor 2 OS=Entamoeba histolytica GN=EF-2 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.200e-48
Identity = 88/149 (59.06%), Postives = 113/149 (75.84%), Query Frame = -2
Query:  351 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 797
            HADAIHRGG Q+IP ARR  +A  LT  P LLEP+Y+ EIQ PE A+GGIY+V++++RG +  E QRPGTPL+N++AYLPV ESFGF+  LR+ TSGQAFPQCVFDHW +++ D  +  ++   +VA IRKRKGL E +  L +F DKL
Sbjct:  692 HADAIHRGGAQMIPCARRCCFACVLTGAPSLLEPMYLAEIQCPESAIGGIYTVMSRRRGKIISEEQRPGTPLFNVRAYLPVCESFGFTADLRSHTSGQAFPQCVFDHWQLLNGDVTDATSKVGSIVAAIRKRKGLPEGVPGLDKFYDKL 840          
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_DICDI (Elongation factor 2 OS=Dictyostelium discoideum GN=efbA PE=1 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 1.002e-45
Identity = 88/149 (59.06%), Postives = 115/149 (77.18%), Query Frame = -2
Query:  351 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 797
            H DAIHRGGGQ+IPTARRV+YA++LTA P LLEP+Y+VEI APE A+GGIYSVLN++RG V  E +R G+PL+++KA+LPV+ESFGF+  LR+ T+GQAFPQCVFDHW   S   +    +A ++    RKRKGL  ++  L +F +KL
Sbjct:  693 HTDAIHRGGGQIIPTARRVLYAAELTASPTLLEPIYLVEITAPENAIGGIYSVLNRRRGIVIGEERRIGSPLFSVKAHLPVLESFGFTADLRSHTAGQAFPQCVFDHW--ASIGVVNKDKKATEVALATRKRKGLAPEIPDLDKFHEKL 839          
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_BLAHO (Elongation factor 2 OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.355e-42
Identity = 83/150 (55.33%), Postives = 106/150 (70.67%), Query Frame = -2
Query:  351 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMS-SDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 797
            HAD+IHRG GQ++P ARRV+  + L A+P L+EPV++ EIQ P    GGIY VL ++RGHVFEE+   GTP+ NIK+YLPV ESFGF+  LR AT+GQAFPQCVF HW   +  DPL  GT+  ++V  IR RKGL  ++     + DKL
Sbjct:  718 HADSIHRGMGQIMPPARRVVLGTMLKAEPILVEPVFLCEIQVPRAVSGGIYGVLTRRRGHVFEEIDEVGTPMMNIKSYLPVAESFGFTQDLRGATAGQAFPQCVFSHWQAYNGGDPLTEGTKTNEMVKSIRNRKGLAPEVPTPERYLDKL 867          
The following BLAST results are available for this feature:
BLAST of CV885048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
EF2_CANGA6.067e-5163.09Elongation factor 2 OS=Candida glabrata GN=EFT1 PE... [more]
EF2_SACCA7.924e-5163.76Elongation factor 2 OS=Saccharomyces castellii GN=... [more]
EF2_PICPA1.352e-5062.42Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=... [more]
EF2_CRYPV1.765e-5061.07Elongation factor 2 OS=Cryptosporidium parvum PE=3... [more]
EF2_DEBHA1.494e-4961.07Elongation factor 2 OS=Debaryomyces hansenii GN=EF... [more]
EF2_CANAL4.348e-4961.74Elongation factor 2 OS=Candida albicans GN=EFT2 PE... [more]
EF2_PICGU9.686e-4962.42Elongation factor 2 OS=Pichia guilliermondii GN=EF... [more]
EF2_ENTHI8.200e-4859.06Elongation factor 2 OS=Entamoeba histolytica GN=EF... [more]
EF2_DICDI1.002e-4559.06Elongation factor 2 OS=Dictyostelium discoideum GN... [more]
EF2_BLAHO1.355e-4255.33Elongation factor 2 OS=Blastocystis hominis PE=2 S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_012C05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885048 ID=CV885048; Name=CV885048; organism=Citrus sinensis; type=EST; length=798bp
TAATATAATAATATATCAACCAACGTCGGCCAGAATTAGTTTAAACACAT
GACAGAACATCAAACCTTAAAAGCTGTGAATTGTAAAATTTAAAACCTAG
ATGACAGAGACAGGGTTACTAAACCCAATCAACAGTAATATTACTTTACT
AAACACAATGAGGATATTGAAAAACTTTGAAACAAAAATAAGCATCAGCA
AAAAATATTGCTGCGCAATCTCACCCTTGATGTCAAGATGAAATGTTTAC
AGCTCGTCCTCTACTCGGATAGCGGTGTCATTTGCTCCCTCTTCCTGATA
TCAGCAACAAGCTGCGCAATCTCACCCTTGATGTCAAGACGAAATGTTTA
CAGCTTGTCCTCAAACTCAGATAGTGGTGTCATTTGCTCCTTCAAGCCCT
TCCTCTTCCTGATATCAGCAACAAGCTGTGCAGCCTGTGTACCAGGCTCC
AGTGGATCGGATGACATCATGTCCCAGTGATCAAACACACATTGTGGGAA
GGCCTGTCCTGACGTTGCAGCCCTCAAAGTGCCTGAGAATCCAAAGGACT
CGATGACGGGAAGGTAAGCCTTGATGTTGTAAAGGGGGGTACCAGGTCTC
TGCATTTCCTCGAACACGTGACCACGTTTCTGATTGAGAACACTGTAAAT
ACCACCAAGGGCCTGCTCGGGAGCCTGTATTTCGACCATGTAGACAGGCT
CAAGAAGCCTGGGCTTGGCTGTGAGCTGGGAAGCATATATGACCCTCCTA
GCAGTAGGAATGACTTGACCACCACCTCTGTGAATGGCATCAGCGTGA
back to top