CV885048

Overview
NameCV885048
Unique NameCV885048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1001 contig Csv1_Contig1001:787..1584. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_SULSO (Elongation factor 2 OS=Sulfolobus solfataricus GN=fusA PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17
Identity = 48/145 (33.10%), Postives = 78/145 (53.79%), Query Frame = -2
Query:  363 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 797
            H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +  LR +T G+AF    F  W  +      P +    +V  IR+RKGL +++  + +F
Sbjct:  598 HEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_SULIY (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17
Identity = 48/145 (33.10%), Postives = 78/145 (53.79%), Query Frame = -2
Query:  363 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 797
            H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +  LR +T G+AF    F  W  +      P +    +V  IR+RKGL +++  + +F
Sbjct:  598 HEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_SULIN (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=fusA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17
Identity = 48/145 (33.10%), Postives = 78/145 (53.79%), Query Frame = -2
Query:  363 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 797
            H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +  LR +T G+AF    F  W  +      P +    +V  IR+RKGL +++  + +F
Sbjct:  598 HEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_SULIM (Elongation factor 2 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17
Identity = 48/145 (33.10%), Postives = 78/145 (53.79%), Query Frame = -2
Query:  363 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 797
            H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +  LR +T G+AF    F  W  +      P +    +V  IR+RKGL +++  + +F
Sbjct:  598 HEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_SULIL (Elongation factor 2 OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17
Identity = 48/145 (33.10%), Postives = 78/145 (53.79%), Query Frame = -2
Query:  363 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 797
            H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +  LR +T G+AF    F  W  +      P +    +V  IR+RKGL +++  + +F
Sbjct:  598 HEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_SULIK (Elongation factor 2 OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=fusA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17
Identity = 48/145 (33.10%), Postives = 78/145 (53.79%), Query Frame = -2
Query:  363 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 797
            H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +  LR +T G+AF    F  W  +      P +    +V  IR+RKGL +++  + +F
Sbjct:  598 HEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_SULIA (Elongation factor 2 OS=Sulfolobus islandicus (strain M.16.27) GN=fusA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17
Identity = 48/145 (33.10%), Postives = 78/145 (53.79%), Query Frame = -2
Query:  363 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 797
            H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +  LR +T G+AF    F  W  +      P +    +V  IR+RKGL +++  + +F
Sbjct:  598 HEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_METS5 (Elongation factor 2 OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=fusA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.573e-17
Identity = 50/145 (34.48%), Postives = 82/145 (56.55%), Query Frame = -2
Query:  363 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 797
            H D  HRG  Q+ P  R  I+A+ L +KP LLEP+  ++I+ P + +G + +VL++KRG V   M + G+ +  I A +PV ES+  +  LR +T G+AF    F  W  +      P +    ++  IR+RKGL +++  + +F
Sbjct:  598 HEDPAHRGPAQIYPAVRNAIFAAMLMSKPTLLEPLQKLDIRVPMEFVGNVTAVLSRKRGKVL-NMTQSGS-VARILAEIPVSESYELASDLRGSTGGRAFWGTEFSKWAPV------PDSILTDVILKIRERKGLPKELPKVEDF 734          
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_METPE (Elongation factor 2 OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=fusA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.360e-17
Identity = 54/139 (38.85%), Postives = 72/139 (51.80%), Query Frame = -2
Query:  381 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQM 797
            H DAIHRG  QVIP  R  + A  L A   LLEP+  + I  P   +G   S +  +RG V +      T    +   +PV E FGFSG +R+AT G+A     F  ++++      P +    +V  IRKRKGLKEQM
Sbjct:  592 HEDAIHRGPAQVIPAVRSAVKAGILYAGDSLLEPIQKISITVPTDQMGNATSQIQGRRGSVLDITSEGDT--ITVVGRVPVAELFGFSGDIRSATEGRAMWNTEFAGFEIV------PNSLVKDVVIAIRKRKGLKEQM 722          
BLAST of CV885048 vs. ExPASy Swiss-Prot
Match: EF2_METJA (Elongation factor 2 OS=Methanocaldococcus jannaschii GN=fusA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.777e-17
Identity = 53/136 (38.97%), Postives = 75/136 (55.15%), Query Frame = -2
Query:  390 HADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLK 797
            H DAIHRG  Q+IP AR  I  + + A P LLEP+  V I  P+  +G     ++ +RG +  +M++ G  +  IKA  PV E FGF+G +R AT G+      F  ++ +  D  E      QL+  IR+RKGLK
Sbjct:  597 HEDAIHRGPAQMIPAARFGIRDAMMQANPVLLEPMQFVYINTPQDFMGAAMREISNRRGQIL-DMEQEG-DMAIIKAKCPVAEMFGFAGAIRGATQGRCLWSIEFAGYEKVPRDMQE------QLIKQIRERKGLK 724          
The following BLAST results are available for this feature:
BLAST of CV885048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
EF2_SULSO1.970e-1733.10Elongation factor 2 OS=Sulfolobus solfataricus GN=... [more]
EF2_SULIY1.970e-1733.10Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIN1.970e-1733.10Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIM1.970e-1733.10Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIL1.970e-1733.10Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIK1.970e-1733.10Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIA1.970e-1733.10Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_METS52.573e-1734.48Elongation factor 2 OS=Metallosphaera sedula (stra... [more]
EF2_METPE3.360e-1738.85Elongation factor 2 OS=Methanosphaerula palustris ... [more]
EF2_METJA9.777e-1738.97Elongation factor 2 OS=Methanocaldococcus jannasch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012C05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885048 ID=CV885048; Name=CV885048; organism=Citrus sinensis; type=EST; length=798bp
TAATATAATAATATATCAACCAACGTCGGCCAGAATTAGTTTAAACACAT
GACAGAACATCAAACCTTAAAAGCTGTGAATTGTAAAATTTAAAACCTAG
ATGACAGAGACAGGGTTACTAAACCCAATCAACAGTAATATTACTTTACT
AAACACAATGAGGATATTGAAAAACTTTGAAACAAAAATAAGCATCAGCA
AAAAATATTGCTGCGCAATCTCACCCTTGATGTCAAGATGAAATGTTTAC
AGCTCGTCCTCTACTCGGATAGCGGTGTCATTTGCTCCCTCTTCCTGATA
TCAGCAACAAGCTGCGCAATCTCACCCTTGATGTCAAGACGAAATGTTTA
CAGCTTGTCCTCAAACTCAGATAGTGGTGTCATTTGCTCCTTCAAGCCCT
TCCTCTTCCTGATATCAGCAACAAGCTGTGCAGCCTGTGTACCAGGCTCC
AGTGGATCGGATGACATCATGTCCCAGTGATCAAACACACATTGTGGGAA
GGCCTGTCCTGACGTTGCAGCCCTCAAAGTGCCTGAGAATCCAAAGGACT
CGATGACGGGAAGGTAAGCCTTGATGTTGTAAAGGGGGGTACCAGGTCTC
TGCATTTCCTCGAACACGTGACCACGTTTCTGATTGAGAACACTGTAAAT
ACCACCAAGGGCCTGCTCGGGAGCCTGTATTTCGACCATGTAGACAGGCT
CAAGAAGCCTGGGCTTGGCTGTGAGCTGGGAAGCATATATGACCCTCCTA
GCAGTAGGAATGACTTGACCACCACCTCTGTGAATGGCATCAGCGTGA
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