CV885047

Overview
NameCV885047
Unique NameCV885047
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1001 contig Csv1_Contig1001:472..1043. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_CHICK (Elongation factor 2 OS=Gallus gallus GN=EEF2 PE=1 SV=3)

HSP 1 Score: 274.248 bits (700), Expect = 3.071e-73
Identity = 128/190 (67.37%), Postives = 155/190 (81.58%), Query Frame = 2
Query:    2 EARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            +ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEG L EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YA  LTA+PRL+EP+Y+VEIQ PEQ +GGIY VLN KRGHVFEE Q  GTP++ +KAYLPV ESF
Sbjct:  605 KARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVTEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGVLCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYACVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESF 794          
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_CAEEL (Elongation factor 2 OS=Caenorhabditis elegans GN=eft-2 PE=2 SV=4)

HSP 1 Score: 273.863 bits (699), Expect = 4.011e-73
Identity = 129/189 (68.25%), Postives = 160/189 (84.66%), Query Frame = 2
Query:    5 ARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            A+P+ +GLA+ I+ G +  RD+ KAR+KIL+E++ +D   A+KIWCFGP+ TGPN+++D+ KGVQYLNEIKDSVVAGFQWA++EG L++ENMRG+ F V DV LHADAIHRGGGQ+IPTARRV YAS LTA+PRLLEPVY+VEIQ PE A+GGIY VLN +RGHVFEE Q  GTP++ +KAYLPV ESF
Sbjct:  600 AQPMPDGLADDIEGGTVNARDEFKARAKILAEKYEYDVTEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESF 788          
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_BOMMO (Translation elongation factor 2 OS=Bombyx mori GN=tef2 PE=1 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 1.524e-72
Identity = 126/190 (66.32%), Postives = 156/190 (82.11%), Query Frame = 2
Query:    2 EARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            +A+P+ +GL E ID+GR+ PRDD K R++ L+E++ +D   A+KIWCFGPE TGPN++VD  KGVQYLNEIKDSVVAGFQWA+KEG +AEEN+RG+ F + DV LH DAIHRGGGQ+IPT RR +YA  LTA+PRL+EPVY+ EIQ PE A+GGIY VLN +RGHVFEE Q  GTP++ +KAYLPV ESF
Sbjct:  591 KAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 780          
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_NEUCR (Elongation factor 2 OS=Neurospora crassa GN=cot-3 PE=3 SV=3)

HSP 1 Score: 271.552 bits (693), Expect = 1.991e-72
Identity = 128/189 (67.72%), Postives = 155/189 (82.01%), Query Frame = 2
Query:    5 ARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            A PLEE L  AI+ G+I PRDD KAR++IL+++FGWD   A+KIW FGP+T G N++VD  K VQYLNEIKDSVV+GFQWA++EG + EE MR I F + DV LHADAIHRGGGQ+IPTARRV+YA+ L A+P LLEPV++VEIQ PEQA+GG+Y VL  +RGHVF E QRPGTPL+ IKAYLPV+ESF
Sbjct:  591 AEPLEEDLCLAIEAGKITPRDDFKARARILADDFGWDVTDARKIWAFGPDTNGANLLVDQTKAVQYLNEIKDSVVSGFQWATREGPIGEEPMRSIRFNILDVTLHADAIHRGGGQIIPTARRVLYAATLLAEPSLLEPVFLVEIQVPEQAMGGVYGVLTRRRGHVFGEEQRPGTPLFTIKAYLPVMESF 779          
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_SCHPO (Elongation factor 2 OS=Schizosaccharomyces pombe GN=eft1 PE=1 SV=2)

HSP 1 Score: 268.47 bits (685), Expect = 1.685e-71
Identity = 129/189 (68.25%), Postives = 150/189 (79.37%), Query Frame = 2
Query:    5 ARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            A P+ E L+ AI+ G + PRDD K R++I+++EFGWD   A+KIWCFGP+TTG N+VVD  K V YLNEIKDSVVA F WASKEG + EEN+R   F + DVVLHADAIHRGGGQ+IPTARRV+YAS L A P + EPV++VEIQ  E A+GGIYSVLN KRGHVF E QR GTPLYNIKAYLPV ESF
Sbjct:  590 AEPMSEELSVAIETGHVNPRDDFKVRARIMADEFGWDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKDSVVAAFAWASKEGPMFEENLRSCRFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLASPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESF 778          
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_DROME (Elongation factor 2 OS=Drosophila melanogaster GN=Ef2b PE=1 SV=4)

HSP 1 Score: 263.848 bits (673), Expect = 4.151e-70
Identity = 123/190 (64.74%), Postives = 154/190 (81.05%), Query Frame = 2
Query:    2 EARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            +A P+ +GL E ID+G +  +D+ KAR++ LSE++ +D   A+KIWCFGP+ TGPN ++D  K VQYLNEIKDSVVAGFQWASKEG LA+EN+RG+ F + DV LHADAIHRGGGQ+IPT RR +YA+ +TAKPRL+EPVY+ EIQ PE A+GGIY VLN +RGHVFEE Q  GTP++ +KAYLPV ESF
Sbjct:  591 KALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEARKIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESF 780          
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_KLULA (Elongation factor 2 OS=Kluyveromyces lactis GN=EFT1 PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 5.994e-69
Identity = 121/190 (63.68%), Postives = 151/190 (79.47%), Query Frame = 2
Query:    2 EARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            +A+P++E ++ AI+ G+I PRDD KAR++I+++EFGWD   A+KIWCFGP+  GPN+VVD  K VQYLNEIKDSVVA FQWA+KEG +  E MR +   + DV LHADAIHRGGGQ+IPT RR  YA  L A+P++ EPV++VEIQ PEQA+GGIYSVLN KRG V  E QRPGTPL+ +KAYLP+ ESF
Sbjct:  589 KAQPIDEEVSLAIEGGKINPRDDFKARARIMADEFGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVAAFQWATKEGPIFGEQMRSVRVNILDVTLHADAIHRGGGQIIPTMRRATYAGFLLAEPKIQEPVFLVEIQCPEQAIGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPINESF 778          
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_SACKL (Elongation factor 2 OS=Saccharomyces kluyveri GN=EFT2 PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.022e-68
Identity = 121/190 (63.68%), Postives = 150/190 (78.95%), Query Frame = 2
Query:    2 EARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            +A P++E ++ AI+ G+I PRDD KAR+++++++FGWD   A+KIWCFGP+  GPN+VVD  K VQYLNEIKDSVVA FQWASKEG +  E MR +   + DV LHADAIHRGGGQ+IPT RR  YA  L A+P++ EPV++VEIQ PEQA+GGIYSVLN KRG V  E QRPGTPL+ +KAYLPV ESF
Sbjct:  589 KAEPIDEEVSLAIEAGKINPRDDFKARARVMADDFGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVAAFQWASKEGPIFGEQMRSVRVNILDVTLHADAIHRGGGQIIPTMRRATYAGFLLAEPKIQEPVFLVEIQCPEQAVGGIYSVLNRKRGQVVSEEQRPGTPLFTVKAYLPVNESF 778          
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_SACCA (Elongation factor 2 OS=Saccharomyces castellii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.022e-68
Identity = 121/190 (63.68%), Postives = 149/190 (78.42%), Query Frame = 2
Query:    2 EARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            +A P+EE ++ AI+ G+I PRDD KAR++++++EFGWD   A+KIWCFGP+  GPN+VVD  K VQYLNEIKDSVVA FQWA+KEG +  E MR +   + DV LHADAIHRGGGQ+IPT RR  YA  L A+P++ EPV++VEIQ PE A+GGIYSVLN KRG V  E QRPGTPL+ +KAYLPV ESF
Sbjct:  589 KAEPIEEEVSLAIESGKINPRDDLKARARVMADEFGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVAAFQWATKEGPIFGEQMRSVRVNILDVTLHADAIHRGGGQIIPTMRRATYAGFLLAEPKIQEPVFLVEIQCPESAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESF 778          
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_CRYPV (Elongation factor 2 OS=Cryptosporidium parvum PE=3 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 6.627e-68
Identity = 116/189 (61.38%), Postives = 149/189 (78.84%), Query Frame = 2
Query:    5 ARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            A PL +GL + I++G++ PRDDPK RS +L +++G+DK+ A KIWCFGPETTGPN++VD+  G+QYL EIKD   + FQWA+KEG L EE+MRGI F + DV LHADAIHRG GQ+ PT RRV+YA+ LTA PRLLEP+++VEI AP++ +GGIY+ LN +RGHVF E  + GTP   IKAYLPV +SF
Sbjct:  580 AEPLPDGLTDDIEEGKVSPRDDPKERSNLLHDKYGFDKNAAMKIWCFGPETTGPNIMVDVTTGIQYLTEIKDHCNSAFQWATKEGILCEEDMRGIRFNLLDVTLHADAIHRGAGQITPTCRRVMYAAALTASPRLLEPMFLVEISAPQEVVGGIYATLNQRRGHVFHEEPKSGTPQVEIKAYLPVADSF 768          
The following BLAST results are available for this feature:
BLAST of CV885047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
EF2_CHICK3.071e-7367.37Elongation factor 2 OS=Gallus gallus GN=EEF2 PE=1 ... [more]
EF2_CAEEL4.011e-7368.25Elongation factor 2 OS=Caenorhabditis elegans GN=e... [more]
EF2_BOMMO1.524e-7266.32Translation elongation factor 2 OS=Bombyx mori GN=... [more]
EF2_NEUCR1.991e-7267.72Elongation factor 2 OS=Neurospora crassa GN=cot-3 ... [more]
EF2_SCHPO1.685e-7168.25Elongation factor 2 OS=Schizosaccharomyces pombe G... [more]
EF2_DROME4.151e-7064.74Elongation factor 2 OS=Drosophila melanogaster GN=... [more]
EF2_KLULA5.994e-6963.68Elongation factor 2 OS=Kluyveromyces lactis GN=EFT... [more]
EF2_SACKL1.022e-6863.68Elongation factor 2 OS=Saccharomyces kluyveri GN=E... [more]
EF2_SACCA1.022e-6863.68Elongation factor 2 OS=Saccharomyces castellii GN=... [more]
EF2_CRYPV6.627e-6861.38Elongation factor 2 OS=Cryptosporidium parvum PE=3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012C05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885047 ID=CV885047; Name=CV885047; organism=Citrus sinensis; type=EST; length=572bp
GGAAGCCCGACCTCTGGAAGAAGGTCTTGCTGAGGCCATAGATGATGGCC
GCATTGGTCCAAGGGATGATCCCAAGGCTCGATCTAAGATCTTGTCTGAG
GAGTTCGGCTGGGACAAGGATCTTGCGAAGAAGATTTGGTGTTTTGGTCC
TGAGACCACTGGCCCTAACATGGTCGTTGATATGTGTAAGGGAGTTCAAT
ACTTGAATGAAATTAAGGATTCTGTTGTTGCTGGTTTCCAGTGGGCATCG
AAAGAAGGTGCGCTGGCTGAAGAGAACATGAGAGGTATCTGCTTTGAAGT
ATGTGATGTTGTTCTTCACGCTGATGCCATTCACAGAGGTGGTGGTCAAG
TCATTCCTACTGCTAGGAGGGTCATATATGCTTCCCAGCTCACAGCCAAG
CCCAGGCTTCTTGAGCCTGTCTACATGGTCGAAATACAGGCTCCCGAGCA
GGCCCTTGGTGGTATTTACAGTGTTCTCAATCACAAACGTGGTCACGTGT
TCGAGGAAATGCAGAGACCTGGTACCCCCCTTTACAACATCAAGGCTTAC
CTTCCCGTCATCGAGTCCTTTG
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