CV885047

Overview
NameCV885047
Unique NameCV885047
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1001 contig Csv1_Contig1001:472..1043. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_PYRAE (Elongation factor 2 OS=Pyrobaculum aerophilum GN=fusA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.793e-34
Identity = 74/187 (39.57%), Postives = 111/187 (59.36%), Query Frame = 2
Query:   11 PLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            PL+E   E I    I    +P+ R+KIL E+ GWD D A+ IW         N++VD   G+QYL EI+D +V GF+W+ + G LA+E MRG+   + D V+H D  HRG  Q++P  +  I+A+ L+A+P LLEP+  ++I+     +G + SVLN  RG + +  Q+       ++A LPV+ESF
Sbjct:  500 PLDETTIELIASREITEDQEPRERAKILREKAGWDTDEARGIWAIDDRYF--NVIVDKTSGIQYLREIRDYIVQGFRWSMEAGPLAQEPMRGVKVVLVDAVVHEDPAHRGPAQIMPATKNAIFAAVLSARPTLLEPLMRLDIKVAPDYIGAVTSVLNKHRGKILDMTQQEYMAF--LRAELPVLESF 682          
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_AERPE (Elongation factor 2 OS=Aeropyrum pernix GN=fusA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.793e-34
Identity = 78/187 (41.71%), Postives = 112/187 (59.89%), Query Frame = 2
Query:   11 PLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            PL E     I +G +    DPK R++IL+++ GWD + A+KIW         N+ VD   GVQYL E+KD+++AGF+ A KEG LA E +RG+   + D V+H D +HRG GQ+ P  R  I+A  L  +P LLEP+  ++I+AP + L  I +VL  KRG +   ++  G  +  I A +PV ESF
Sbjct:  498 PLNEETITLIQNGAVTEDQDPKDRARILADKAGWDYNEARKIWAIDENI---NVFVDKTAGVQYLREVKDTIIAGFRLALKEGPLAAEPVRGVKVVLHDAVIHEDPVHRGPGQLYPAVRNAIWAGILDGRPTLLEPLQKLDIRAPMEYLSNITAVLTRKRGRII-NVETTGV-MARIIAAIPVAESF 679          
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_PYRCJ (Elongation factor 2 OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=fusA PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.068e-33
Identity = 71/187 (37.97%), Postives = 111/187 (59.36%), Query Frame = 2
Query:   11 PLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            PL+E   E I    I    DP+ R+KIL E+ GWD D A+ +W         N++VD   G+QYL EI+D ++ GF+WA + G LA+E +RG+   + D V+H D  HRG  Q++P  +  I+A+ L+A+P +LEP+  ++I+     +G + SV+N  RG + +  Q+       ++A LPV+ESF
Sbjct:  500 PLDETTVELIATREITEEQDPRERAKILREKAGWDTDEARGVWAIDDRYF--NVIVDKTTGIQYLREIRDYIIQGFRWAMEAGPLAQEPIRGVKVVLVDAVVHEDPAHRGPAQIMPATKNAIFAAFLSARPTILEPLVRLDIKVAPDYIGAVTSVINKHRGKILDMTQQEYMAF--LRAELPVLESF 682          
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_IGNH4 (Elongation factor 2 OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=fusA PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.068e-33
Identity = 73/187 (39.04%), Postives = 109/187 (58.29%), Query Frame = 2
Query:   11 PLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            PLE+ + E I  G I    DP+ R+K+L ++  WD D A++IW    E    N+ +D   GVQ+L E+KD+++AG++ A KEG LA+E +RG+   + D V+H D  HRG  Q+ P  R  +YAS LT  P LLEP   ++I+ P + +G +  V+   RG + E +   G     I A +P+ ESF
Sbjct:  501 PLEKEVIEMIQKGEITDDQDPRERAKVLRDKVNWDADTARRIWAVDEENF--NIFIDKTVGVQHLREVKDTILAGWRLAMKEGPLAKEPVRGVKVILWDAVIHEDPAHRGPAQLYPAVRNAVYASMLTDSPTLLEPWQKLDIRVPNEYIGAVTGVITKHRGKILEVIDMGGQA--RIVAAVPIAESF 683          
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_DESMO (Elongation factor 2 OS=Desulfurococcus mobilis GN=fusA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.821e-33
Identity = 79/187 (42.25%), Postives = 109/187 (58.29%), Query Frame = 2
Query:   11 PLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            PL E     + +G I    D + R+KIL E+ GWD D A++I          NM+VDM  GVQYL EIKD+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LTAKP +LEP+  ++I+ P + +G I +V+  KRG + E  Q   +    + A +PV ESF
Sbjct:  496 PLNEETLRLMSEGIIVEDMDARERAKILREQAGWDADEARRIMAIDENL---NMLVDMTTGVQYLREIKDTVIQGFRLAMKEGPLAMEPVRGVKVVLHDAVVHEDPAHRGPAQIFPAVRNAIFAGFLTAKPTILEPILKLDIRTPMEYIGNISTVITKKRGKLIEVQQMETSA--RVIAEIPVSESF 677          
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_DESK1 (Elongation factor 2 OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=fusA PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.058e-33
Identity = 75/187 (40.11%), Postives = 110/187 (58.82%), Query Frame = 2
Query:   11 PLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            PL E     + +G I    D + R+KIL E+ GWD D A++I          N+++DM  GVQYL E+KD+++ GF+ A +EG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LTA+P +LEP+  ++I++P + +G I SV+  KRG + E  Q   T    + A +PV ESF
Sbjct:  498 PLNEETLRLLSEGIIMEDMDARERAKILREQAGWDADEARRIMAIDENL---NILIDMTTGVQYLREVKDTIIQGFRLAMREGPLAMEPVRGVKVVLHDAVIHEDPAHRGPAQIFPAVRNAIFAGFLTARPTILEPILKLDIRSPMEYIGNISSVITKKRGKLIEVQQMETTA--RVIAEIPVSESF 679          
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_SULSO (Elongation factor 2 OS=Sulfolobus solfataricus GN=fusA PE=1 SV=3)

HSP 1 Score: 130.568 bits (327), Expect = 5.484e-30
Identity = 72/187 (38.50%), Postives = 105/187 (56.15%), Query Frame = 2
Query:   11 PLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            PL +   E I +G I    D K  +KIL +E  WD D AK+I          N+ VD+  GVQ+L E+ D+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+  KRG + +  Q     +  I A +PV ES+
Sbjct:  499 PLNDKTIELISNGTIREDMDSKEMAKILRDEASWDYDEAKRIIAIDENV---NVFVDLTSGVQHLREVMDTVLQGFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESY 680          
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_SULIY (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.484e-30
Identity = 72/187 (38.50%), Postives = 105/187 (56.15%), Query Frame = 2
Query:   11 PLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            PL +   E I +G I    D K  +KIL +E  WD D AK+I          N+ VD+  GVQ+L E+ D+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+  KRG + +  Q     +  I A +PV ES+
Sbjct:  499 PLNDKTIELISNGTIREDMDSKEMAKILRDEASWDYDEAKRIIAIDENV---NVFVDLTSGVQHLREVMDTVLQGFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESY 680          
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_SULIN (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=fusA PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.484e-30
Identity = 72/187 (38.50%), Postives = 105/187 (56.15%), Query Frame = 2
Query:   11 PLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            PL +   E I +G I    D K  +KIL +E  WD D AK+I          N+ VD+  GVQ+L E+ D+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+  KRG + +  Q     +  I A +PV ES+
Sbjct:  499 PLNDKTIELISNGTIREDMDSKEMAKILRDEASWDYDEAKRIIAIDENV---NVFVDLTSGVQHLREVMDTVLQGFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESY 680          
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_SULIM (Elongation factor 2 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.484e-30
Identity = 72/187 (38.50%), Postives = 105/187 (56.15%), Query Frame = 2
Query:   11 PLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            PL +   E I +G I    D K  +KIL +E  WD D AK+I          N+ VD+  GVQ+L E+ D+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+  KRG + +  Q     +  I A +PV ES+
Sbjct:  499 PLNDKTIELISNGTIREDMDSKEMAKILRDEASWDYDEAKRIIAIDENV---NVFVDLTSGVQHLREVMDTVLQGFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESY 680          
The following BLAST results are available for this feature:
BLAST of CV885047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
EF2_PYRAE4.793e-3439.57Elongation factor 2 OS=Pyrobaculum aerophilum GN=f... [more]
EF2_AERPE4.793e-3441.71Elongation factor 2 OS=Aeropyrum pernix GN=fusA PE... [more]
EF2_PYRCJ1.068e-3337.97Elongation factor 2 OS=Pyrobaculum calidifontis (s... [more]
EF2_IGNH41.068e-3339.04Elongation factor 2 OS=Ignicoccus hospitalis (stra... [more]
EF2_DESMO1.821e-3342.25Elongation factor 2 OS=Desulfurococcus mobilis GN=... [more]
EF2_DESK14.058e-3340.11Elongation factor 2 OS=Desulfurococcus kamchatkens... [more]
EF2_SULSO5.484e-3038.50Elongation factor 2 OS=Sulfolobus solfataricus GN=... [more]
EF2_SULIY5.484e-3038.50Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIN5.484e-3038.50Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIM5.484e-3038.50Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012C05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885047 ID=CV885047; Name=CV885047; organism=Citrus sinensis; type=EST; length=572bp
GGAAGCCCGACCTCTGGAAGAAGGTCTTGCTGAGGCCATAGATGATGGCC
GCATTGGTCCAAGGGATGATCCCAAGGCTCGATCTAAGATCTTGTCTGAG
GAGTTCGGCTGGGACAAGGATCTTGCGAAGAAGATTTGGTGTTTTGGTCC
TGAGACCACTGGCCCTAACATGGTCGTTGATATGTGTAAGGGAGTTCAAT
ACTTGAATGAAATTAAGGATTCTGTTGTTGCTGGTTTCCAGTGGGCATCG
AAAGAAGGTGCGCTGGCTGAAGAGAACATGAGAGGTATCTGCTTTGAAGT
ATGTGATGTTGTTCTTCACGCTGATGCCATTCACAGAGGTGGTGGTCAAG
TCATTCCTACTGCTAGGAGGGTCATATATGCTTCCCAGCTCACAGCCAAG
CCCAGGCTTCTTGAGCCTGTCTACATGGTCGAAATACAGGCTCCCGAGCA
GGCCCTTGGTGGTATTTACAGTGTTCTCAATCACAAACGTGGTCACGTGT
TCGAGGAAATGCAGAGACCTGGTACCCCCCTTTACAACATCAAGGCTTAC
CTTCCCGTCATCGAGTCCTTTG
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