CV885047
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_PYRHO (Elongation factor 2 OS=Pyrococcus horikoshii GN=fusA PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 8.776e-20 Identity = 63/189 (33.33%), Postives = 98/189 (51.85%), Query Frame = 2 Query: 11 PLEEGLAEAIDDGRI--GPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571 P+ + + AI +G I G +PK +K L+E G D ++A+ I + NM +D KGVQYLNE+ D ++ GF A EG LA E + + + D +H D +HRG Q+ P R I+ + + + P L EP V I P + +G + + +RG + +M++ G + I A PV E F Sbjct: 493 PMPDEIYNAIKEGIIPEGRVKNPKEVAKKLAE-LGMDYEIARGI----VDIYNGNMFIDNTKGVQYLNEVMDLLIDGFHQAMDEGPLAREPVMKVIVRLLDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVIINIPYEYMGAVSREITQRRGQLV-DMKQEG-EVMTIIAEAPVAEMF 674
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_PYRAB (Elongation factor 2 OS=Pyrococcus abyssi GN=fusA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.776e-20 Identity = 63/189 (33.33%), Postives = 99/189 (52.38%), Query Frame = 2 Query: 11 PLEEGLAEAIDDGRI--GPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571 P+ + + AI +G I G +PK +K L+E G D ++A+ I + NM +D KGVQYLNE+ D ++ GF A EG LA+E + + + D +H D +HRG Q+ P R I+ + + + P L EP V I P + +G + + +RG + +M++ G + I A PV E F Sbjct: 493 PMPDEIYNAIKEGIIPEGRIKNPKEVAKKLAE-LGMDYEIARGI----VDVYNGNMFLDNTKGVQYLNEVMDLLIDGFHQAMDEGPLAKEPVMKVIVRLIDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVIINIPYEYMGAVSREITQRRGQLV-DMKQEG-EVMTIIAEAPVAEMF 674
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_META3 (Elongation factor 2 OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=fusA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.429e-19 Identity = 61/192 (31.77%), Postives = 101/192 (52.60%), Query Frame = 2 Query: 5 ARPLEEGLAEAIDDGRIGPRDDPKARSKILSE---EFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571 A PL+E + A +G I D K K + E G +++ AK++ N++++M +G+ L+E ++ ++ GF+ A K G LA E +G+ ++ D V H DAIHRG Q+IP R + + A LLEP+ V I P+ +G L+++RG + +M++ G + IK+ PV E F Sbjct: 495 AEPLDECVYNAHVEGLIKDEDFKKKTPKEVETKLVEIGMNREEAKRVMTIYEG----NVLLNMTRGIVQLDEARELIIEGFKEAVKNGPLAAEKCQGVKVKLMDAVFHEDAIHRGPAQLIPAVRTGVRDAIAQANVGLLEPIQNVYISTPQDYMGDAMKELSNRRGQIL-DMEQEG-DMTTIKSKAPVSEMF 680
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_HALSA (Elongation factor 2 OS=Halobacterium salinarium GN=fusA PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 1.655e-18 Identity = 60/184 (32.61%), Postives = 95/184 (51.63%), Query Frame = 2 Query: 14 LEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIE 565 L + + E I G + D P+ + + +E G DK+ ++ + G N+ +D KG+Q+LNE + VV G + ++G LA E + G + D LH DAIHRG QVIP R ++ + + A RLLEP+ V I P + +G + +RG V ++M + G L ++ PV E Sbjct: 495 LSDDVLEEIRLGEVS-MDMPEQERREVLQEAGMDKETSQDV----ENIIGRNIFIDDTKGIQHLNETMELVVDGLTDSLEDGPLAAEPVEGALIRLHDARLHEDAIHRGPAQVIPATRDAVHRALIDADIRLLEPIQDVRIDVPSEHMGAASGEVQGRRGRV-DDMYQEG-DLMVVEGIAPVDE 671
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_HALS3 (Elongation factor 2 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=fusA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.655e-18 Identity = 60/184 (32.61%), Postives = 95/184 (51.63%), Query Frame = 2 Query: 14 LEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIE 565 L + + E I G + D P+ + + +E G DK+ ++ + G N+ +D KG+Q+LNE + VV G + ++G LA E + G + D LH DAIHRG QVIP R ++ + + A RLLEP+ V I P + +G + +RG V ++M + G L ++ PV E Sbjct: 495 LSDDVLEEIRLGEVS-MDMPEQERREVLQEAGMDKETSQDV----ENIIGRNIFIDDTKGIQHLNETMELVVDGLTDSLEDGPLAAEPVEGALIRLHDARLHEDAIHRGPAQVIPATRDAVHRALIDADIRLLEPIQDVRIDVPSEHMGAASGEVQGRRGRV-DDMYQEG-DLMVVEGIAPVDE 671
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: RIA1_SCHPO (Ribosome assembly protein 1 OS=Schizosaccharomyces pombe GN=ria1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.121e-17 Identity = 57/186 (30.65%), Postives = 91/186 (48.92%), Query Frame = 2 Query: 83 SKILSEE---FGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYL-----------NEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRG---------GGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571 SK+L EE G K+ I FGP+ GPN++ D K ++ +++ + VV FQ + +G L E ++GIC + + D+ GQVI + I L PRL+ +Y ++QA + LG +Y V++ +RG V +E + GTP + +KA +PV+ESF Sbjct: 731 SKLLEEENSDLGELKNHLDSIIAFGPKRVGPNILFDKTKKMRDFRRQSDETKLIPSDLSEYVVTAFQLITHQGPLCAEPVQGICVSIDQFDISDDSEDSKLLTINNPQIPGQVISVVKESIRHGFLGWSPRLMLAMYSCDVQATSEVLGRVYGVVSKRRGRVIDEEMKEGTPFFIVKALIPVVESF 916
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_NANEQ (Elongation factor 2 OS=Nanoarchaeum equitans GN=fusA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.816e-15 Identity = 46/133 (34.59%), Postives = 69/133 (51.88%), Query Frame = 2 Query: 167 NMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIE 565 NM DM +G+ ++ E+ D V+ F G +A E G+ ++ D LH DAIHRG GQVIP R I + A L EPV ++ + P +G + +++N +RG + + L IKA +PV E Sbjct: 560 NMFFDMTRGIIHIGEVIDMVMDAFMQVMDHGPIAWEPCIGLIVKLTDAQLHEDAIHRGPGQVIPAVREAIKLAMKDAGLVLYEPVQVILVDVPPDYIGDVTALINSRRGAILDIQTEEDRAL--IKAKVPVRE 690
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: RIA1_YEAST (Ribosome assembly protein 1 OS=Saccharomyces cerevisiae GN=RIA1 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.219e-14 Identity = 50/167 (29.94%), Postives = 82/167 (49.10%), Query Frame = 2 Query: 131 KIWCFGPETTGPNMVVD-------MCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDV-VLHADAIHRG------------GGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571 K+ FGP G N+++ + +G E DS+ GFQ A EG LA E ++G+C V V + D I G++I + R I+ + L PR++ +Y +IQ LG +Y+V+ + G + E + GTP + I+A++PV+E+F Sbjct: 859 KLAGFGPSRVGCNILLSQDNLLGSLFEGTPAAFEYSDSIKNGFQLAVSEGPLANEPVQGMCVLVESVHKMSQDEIESIEDPRYQQHIVDLSGRLITSTRDAIHEAFLDWSPRIMWAIYSCDIQTSVDVLGKVYAVILQRHGKIISEEMKEGTPFFQIEAHVPVVEAF 1025 The following BLAST results are available for this feature:
BLAST of CV885047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885047 ID=CV885047; Name=CV885047; organism=Citrus sinensis; type=EST; length=572bpback to top |