CV885043

Overview
NameCV885043
Unique NameCV885043
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5753 contig Csv1_Contig5753:186..792. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.361e-29
Identity = 58/115 (50.43%), Postives = 78/115 (67.83%), Query Frame = -1
Query:  263 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRLSFHLY 607
            + V VNVW + RDPA+W+NP EF P+RFL + +D+KG DF LLPFG GRR+CPG  LG+ +V S +++LLH F W  P     +E++M E  GL T  + P++ VA PRL   LY
Sbjct:  387 SNVHVNVWAVARDPAVWKNPFEFRPERFLEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMMSHLLHHFVWTPPQGTKPEEIDMSENPGLVTYMRTPVQAVATPRLPSDLY 501          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.027e-29
Identity = 55/104 (52.88%), Postives = 76/104 (73.08%), Query Frame = -1
Query:  293 RVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 604
            R+LVN W IGRDP LW NP EF P+RF+   +D +G+ FELLPFG+GRRICPGM LG+ +V+  L NLL+ F W+ P  M++++++ EE   L+  KK PL++V
Sbjct:  394 RILVNTWAIGRDPTLWINPEEFNPERFINNPVDYRGQHFELLPFGSGRRICPGMGLGITIVELGLLNLLYFFDWRAPDGMTHKDIDTEEAGILTVVKKVPLKLV 497          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.869e-29
Identity = 56/108 (51.85%), Postives = 76/108 (70.37%), Query Frame = -1
Query:  278 VLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRL 601
            V+VNVW + RDP +W NP E+ P+RFL ++ID+KG DF +LPFG GRR+CPG  LG+ +V S + +LLH F W LP     +++NM E+ GL T    PL+ VA+PRL
Sbjct:  392 VMVNVWAVARDPKVWSNPLEYRPERFLEENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSLPEGTRPEDVNMMESPGLVTFMGTPLQAVAKPRL 499          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.869e-29
Identity = 53/105 (50.48%), Postives = 79/105 (75.24%), Query Frame = -1
Query:  293 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 607
            T + VN+W + R+P +W++P  F P+RF+   ID KG DFELLPFG+GRR+CPGM LG+ +V  +L NLL+ F WKLP  M+ +++++EE++GL  PKK PL+++
Sbjct:  385 TWIYVNIWAVQRNPNVWKDPEVFIPERFMHSEIDYKGVDFELLPFGSGRRMCPGMGLGMALVHLTLINLLYRFDWKLPEGMNIEDVDLEESYGLVCPKKVPLQLI 489          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.971e-29
Identity = 62/120 (51.67%), Postives = 80/120 (66.67%), Query Frame = -1
Query:  260 TRVLVNVWTIGRDPALW-ENPNEFYPQRFL---GKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRLSFHLYS 607
            TR+ VN+W IGRDP++W +NPNEF P+RFL      ID +G  FEL+PFG GRRIC G  +G+ +V+  L  L+H F WKL    S  ELNM+ETFGL+  K  PL  +  PRL  H+Y+
Sbjct:  398 TRLNVNIWAIGRDPSVWGDNPNEFDPERFLYGRNAKIDPRGNHFELIPFGAGRRICAGTRMGILLVEYILGTLVHSFDWKL--GFSEDELNMDETFGLALQKAVPLAAMVIPRLPLHVYA 515          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.971e-29
Identity = 58/108 (53.70%), Postives = 76/108 (70.37%), Query Frame = -1
Query:  284 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQP 607
            T+ L+NVW IGRDP  WENP EF P+RFL   ID+KG  FELLPFG+GRR CPG S  + V++ +LA L+H F++ LP     ++L+M E  G++T +K PL VVA P
Sbjct:  397 TQALINVWAIGRDPLSWENPEEFCPERFLNNDIDMKGLKFELLPFGSGRRGCPGSSFAIAVIELALARLVHKFNFALPKGTKPEDLDMTECTGIATRRKSPLPVVATP 504          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.172e-28
Identity = 58/111 (52.25%), Postives = 81/111 (72.97%), Query Frame = -1
Query:  275 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRLS 607
            TR+ VNVW IGRDP  W++P EF P+RF+  +ID KG++FELLPFG+GRR+CP M +G  +V+  LANLL+ F WKLP  M  ++++MEE+ GL+  KK  L +V +  L+
Sbjct:  389 TRLYVNVWGIGRDPDTWKDPEEFLPERFVNSNIDAKGQNFELLPFGSGRRMCPAMYMGTTMVEFGLANLLYHFDWKLPEGMVVEDIDMEESPGLNASKKNELVLVPRKYLN 499          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.172e-28
Identity = 56/105 (53.33%), Postives = 79/105 (75.24%), Query Frame = -1
Query:  293 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 607
            TR+ VNVW IGRDP +W++P EF P+RF+   IDVKG+D+ELLPFG+GRRICP + +G+  V+  LANLL+ F WKLP  ++ +++ M+E  GL++ KK  L +V
Sbjct:  392 TRLHVNVWAIGRDPEIWKDPEEFLPERFMDCDIDVKGQDYELLPFGSGRRICPAVYMGITTVEFGLANLLYHFDWKLPEGVAVEDIYMDEASGLTSHKKHDLLLV 496          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.530e-28
Identity = 56/104 (53.85%), Postives = 77/104 (74.04%), Query Frame = -1
Query:  293 RVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 604
            R+LVNV  IGRDP LW NP EF P+RF+  S+D +G+ +ELLPFG+GRRICPGM +G+  V+  L NLL+ F WKLP  M++++++ EE   L+  KK PL++V
Sbjct:  394 RILVNVSAIGRDPKLWTNPEEFDPERFMDSSVDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDWKLPDGMTHKDIDTEEAGTLTIVKKVPLQLV 497          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.610e-28
Identity = 52/105 (49.52%), Postives = 78/105 (74.29%), Query Frame = -1
Query:  293 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 607
            T + VN+W I R+P +W++P  F P+RF+   ID KG +FELLPFG+GRRICPG+ +G+ ++  +L NLL+ F WKLP  M  +++++EE++GL  PKK PLE++
Sbjct:  385 TWIHVNIWAIHRNPNVWKDPEAFIPERFMDNQIDYKGLNFELLPFGSGRRICPGIGMGMALIHLTLINLLYRFDWKLPEGMEVEDVDLEESYGLVCPKKVPLELI 489          
The following BLAST results are available for this feature:
BLAST of CV885043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
C98A3_ARATH2.361e-2950.43Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C71BG_ARATH4.027e-2952.88Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C98A1_SORBI6.869e-2951.85Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71BE_ARATH6.869e-2950.48Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C75A4_GENTR8.971e-2951.67Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C71A4_SOLME8.971e-2953.70Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71BY_ARATH1.172e-2852.25Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71BA_ARATH1.172e-2853.33Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71BK_ARATH1.530e-2853.85Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71BD_ARATH2.610e-2849.52Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012B10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885043 ID=CV885043; Name=CV885043; organism=Citrus sinensis; type=EST; length=607bp
GAAACAGCCCCATGTAAGTAAGTGTTTACGGAAAGCGATGGTAAAATATC
ACCACTAACAAAGTTCATTATTTAAAAGGCACAATATCTAAGCCCAAAAA
GATTACGTTGGCTAGGGTACACTGGCTCTCGTTATATCTTCAAATTCAGG
ACCATGTTCGCACTAGCAAACCAAAGCAAGACCATCAAGAAGCGCTTATT
CAAAATATATTAAAAGCGAACCAAGCCATAATTAGTTCTTTTGGATGCCA
GAATCACAGACTATAAAGATGGAATGAAAGCCTTGGCTGAGCCACGACTT
CAAGCGGAAATTTTTTCGGAGTGGAAAGGCCAAAAGTTTCCTCCATATTA
AGCTCCTGATTGCTCATATTTCCAGGCAATTTCCATGAAAATCCATGTAA
AAGATTAGCCAAACTTGATTGAACAACCTTAAGCCCTAGACTCATCCCTG
GGCAAATTCTTCTTCCTGTACCAAAAGGCAGCAACTCAAAATCACGCCCT
TTCACATCAATTGATTTTCCAAGGAACCTCTGAGGGTAAAATTCATTAGG
ATTTTCCCACAAAGCAGGGTCTCTCCCTATCGTCCATACATTAACTAGGA
CTCGGGT
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