CV885043

Overview
NameCV885043
Unique NameCV885043
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5753 contig Csv1_Contig5753:186..792. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.210e-27
Identity = 55/109 (50.46%), Postives = 78/109 (71.56%), Query Frame = -1
Query:  281 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPR 607
            T+++VNV+ IGRDP LWENP EF P+RF+  S+D +G +FELLPFG+GRRICPGM++G+  V+  L NLL+ F W LP   + +++++EE   +   KK  LE+V   R
Sbjct:  392 TQIMVNVYAIGRDPDLWENPEEFKPERFVDSSVDYRGLNFELLPFGSGRRICPGMTMGIATVELGLLNLLYFFDWGLPEGRTVKDIDLEEEGAIIIGKKVSLELVPTRR 500          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.210e-27
Identity = 51/108 (47.22%), Postives = 74/108 (68.52%), Query Frame = -1
Query:  284 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQP 607
            T + +N ++IGRDP  WENPN+F P+RF+   ++ KG+ +ELLPFG GRRICPGM+ G+ +V+  L N+L+ F W LP  M  ++++MEE       KK PLE++  P
Sbjct:  390 TMIEINTYSIGRDPNCWENPNDFNPERFIDSPVEYKGQHYELLPFGAGRRICPGMATGITIVELGLLNVLYFFDWSLPDGMKIEDIDMEEAGAFVVAKKVPLELIPTP 497          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.210e-27
Identity = 52/109 (47.71%), Postives = 75/109 (68.81%), Query Frame = -1
Query:  281 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPR 607
            T++ +NVWTIGRDP  W +P EF P+RF   S+D +G+ F+LLPFG+GRRICPGM + +  V+ +L NLL+ F W +P     ++++MEE   +S  KK PL++V   R
Sbjct:  393 TQIQLNVWTIGRDPKRWNDPEEFNPERFANSSVDFRGQHFDLLPFGSGRRICPGMPMAIASVELALMNLLYYFDWSMPDGTKGEDIDMEEAGNISIVKKIPLQLVPVQR 501          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.886e-27
Identity = 50/105 (47.62%), Postives = 77/105 (73.33%), Query Frame = -1
Query:  293 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 607
            T + VN+W I R+P +W++P  F P+RF+   ID KG +FE LPFG+GRR+CPG+ +G+ +V  +L NLL+ F WKLP  M  +++++EE++GL  PKK PL+++
Sbjct:  385 TWIHVNIWAIHRNPNVWKDPEAFIPERFMDNQIDYKGLNFEFLPFGSGRRMCPGIGMGMALVHLTLINLLYRFDWKLPEGMEVEDVDLEESYGLVCPKKVPLQLI 489          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.769e-27
Identity = 56/99 (56.57%), Postives = 69/99 (69.70%), Query Frame = -1
Query:  311 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKK 607
            TR+ +NVW IGRDP  WE+P+ F P+RF   S D  G DFE +PFG GRRICPG+  GL  V+  LA LL+ F WKLP  M++ +L+M ET GLS PKK
Sbjct:  385 TRIFINVWAIGRDPQYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLDMTETPGLSGPKK 483          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.769e-27
Identity = 56/99 (56.57%), Postives = 69/99 (69.70%), Query Frame = -1
Query:  311 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKK 607
            TR+ +NVW IGRDP  WE+P+ F P+RF   S D  G DFE +PFG GRRICPG+  GL  V+  LA LL+ F WKLP  M++ +L+M ET GLS PKK
Sbjct:  385 TRIFINVWAIGRDPQYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLDMTETPGLSGPKK 483          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.769e-27
Identity = 55/105 (52.38%), Postives = 71/105 (67.62%), Query Frame = -1
Query:  293 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 607
            T + +N + IGRDP  W NPNEF P+RF+   ID KG+ FELLPFG GRRICPGM+ G+ +V+  L N+L+ F W LP  M+  ++NMEE       KK PLE+V
Sbjct:  390 TMIEINTYAIGRDPNCWTNPNEFIPERFVDSPIDYKGQHFELLPFGGGRRICPGMATGMTIVELGLLNVLYFFDWSLPYGMAIADINMEEAGAFVIAKKVPLELV 494          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 4.922e-27
Identity = 53/105 (50.48%), Postives = 72/105 (68.57%), Query Frame = -1
Query:  293 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 607
            T + +N + IGRDP  W+ P EF P+RFL   ID KG+ FELLPFG GRRICPGM+ G+ +V+  L NLL+ F W LP  M+ ++++MEE  G +  KK PL ++
Sbjct:  390 TMIQINTYAIGRDPKYWKQPGEFIPERFLDSPIDYKGQHFELLPFGAGRRICPGMATGITMVELGLLNLLYFFDWSLPNGMTIEDIDMEEDEGFAIAKKVPLVLI 494          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.922e-27
Identity = 54/105 (51.43%), Postives = 77/105 (73.33%), Query Frame = -1
Query:  293 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 607
            T++++N+++I RDP LW NP+EF P RFL  SID +G +FELLPFG+GRRICPGM+LG+  V+  L NLL+ F W +P   + +++N+EET  +   KK  LE+V
Sbjct:  395 TQMMINIYSIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTLGITTVELGLLNLLYFFDWVVPVGKNVKDINLEETGSIIISKKTTLELV 499          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 6.429e-27
Identity = 54/105 (51.43%), Postives = 78/105 (74.29%), Query Frame = -1
Query:  293 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 607
            T + VNVW IGRDP  W++ + FYP+RF+  +ID KG++FELLPFG+GRRICPGM +G  +V+  LAN+L+ F W++P  M  ++++MEE+ GL+  KK  L +V
Sbjct:  389 TLLYVNVWAIGRDPDSWKDADMFYPERFMDNNIDAKGQNFELLPFGSGRRICPGMYMGTTMVEFGLANMLYQFDWEVPDGMVVEDIDMEESPGLAVGKKNELLLV 493          
The following BLAST results are available for this feature:
BLAST of CV885043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
C71BN_ARATH2.210e-2750.46Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71BM_ARATH2.210e-2747.22Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71B2_ARATH2.210e-2747.71Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71BB_ARATH2.886e-2747.62Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C71DI_MENSP3.769e-2756.57Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR3.769e-2756.57Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C71BL_ARATH3.769e-2752.38Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71BZ_ARATH4.922e-2750.48Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71B7_ARATH4.922e-2751.43Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71B9_ARATH6.429e-2751.43Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_012B10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885043 ID=CV885043; Name=CV885043; organism=Citrus sinensis; type=EST; length=607bp
GAAACAGCCCCATGTAAGTAAGTGTTTACGGAAAGCGATGGTAAAATATC
ACCACTAACAAAGTTCATTATTTAAAAGGCACAATATCTAAGCCCAAAAA
GATTACGTTGGCTAGGGTACACTGGCTCTCGTTATATCTTCAAATTCAGG
ACCATGTTCGCACTAGCAAACCAAAGCAAGACCATCAAGAAGCGCTTATT
CAAAATATATTAAAAGCGAACCAAGCCATAATTAGTTCTTTTGGATGCCA
GAATCACAGACTATAAAGATGGAATGAAAGCCTTGGCTGAGCCACGACTT
CAAGCGGAAATTTTTTCGGAGTGGAAAGGCCAAAAGTTTCCTCCATATTA
AGCTCCTGATTGCTCATATTTCCAGGCAATTTCCATGAAAATCCATGTAA
AAGATTAGCCAAACTTGATTGAACAACCTTAAGCCCTAGACTCATCCCTG
GGCAAATTCTTCTTCCTGTACCAAAAGGCAGCAACTCAAAATCACGCCCT
TTCACATCAATTGATTTTCCAAGGAACCTCTGAGGGTAAAATTCATTAGG
ATTTTCCCACAAAGCAGGGTCTCTCCCTATCGTCCATACATTAACTAGGA
CTCGGGT
back to top