CV885043

Overview
NameCV885043
Unique NameCV885043
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5753 contig Csv1_Contig5753:186..792. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.859e-25
Identity = 51/105 (48.57%), Postives = 76/105 (72.38%), Query Frame = -1
Query:  293 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 607
            TR+ VN W IGR+P +W++P+EF P+RF+  +++ KG  FELLPFG+GRR CP M +GL  V+ +LANLL+ F WK     + +E+++EE  GL++ +K PL +V
Sbjct:  395 TRIHVNAWAIGRNPDVWKDPDEFIPERFVDSNVETKGTSFELLPFGSGRRGCPAMYVGLSTVEYTLANLLYHFDWK-----ATEEVSVEEAPGLTSHRKHPLHLV 494          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.859e-25
Identity = 53/108 (49.07%), Postives = 71/108 (65.74%), Query Frame = -1
Query:  284 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQP 607
            TRVL+N W IGRD ++WE    F P+RFL  SID +G  FEL+PFG+GRR CPG +    + + +LA L+H F +KLP  +  ++L+M E  G +  KKFPL VV  P
Sbjct:  399 TRVLINCWAIGRDSSVWEESETFLPERFLETSIDYRGMHFELIPFGSGRRGCPGATFAAAIDELALATLVHKFDFKLPNGVRVEDLDMSEGSGFTIHKKFPLLVVPTP 506          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.026e-24
Identity = 59/114 (51.75%), Postives = 79/114 (69.30%), Query Frame = -1
Query:  275 TRVLVNVWTIGRDPALWENPNEFYPQRFL--GKS-IDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRLS 607
            TR+ VNVW IGRDP  WENP EF P+RF+  GKS +DV+G+ + LLPFG+GRR CPG SL L+VV  +LA L+  F WK+  +  N ++NMEE  G++ P+  P+  V   RL+
Sbjct:  394 TRLFVNVWAIGRDPNHWENPLEFRPERFVENGKSQLDVRGQHYHLLPFGSGRRACPGTSLALQVVHVNLAVLIQCFQWKV--DCDNGKVNMEEKAGITLPRAHPIICVPIRRLN 505          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.026e-24
Identity = 58/117 (49.57%), Postives = 78/117 (66.67%), Query Frame = -1
Query:  263 TRVLVNVWTIGRDPALWENPNEFYPQRFLG--KSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRLSFHLY 607
            TR++ N+W I RDP++W +P EF P+RFL   K +DV+G++FELLPFG+GRR+C GMSLGL +V   LAN LH F      N S + +++ E     T K  PLEV+ +P LSF  Y
Sbjct:  428 TRLMPNLWKIHRDPSVWPDPLEFKPERFLSTHKDVDVRGQNFELLPFGSGRRMCAGMSLGLHMVHYILANFLHSFEIL---NPSPESIDVTEVLEFVTTKATPLEVLVKPCLSFKCY 541          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.026e-24
Identity = 53/108 (49.07%), Postives = 72/108 (66.67%), Query Frame = -1
Query:  284 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQP 607
            T+V+VNVW +GRDP  W++   F P+RF   SID  G +FE LPFG GRRICPG+S GL  V   LA LL+ F WKLP  M  ++L++ E+ G++  +K  L ++A P
Sbjct:  390 TKVMVNVWALGRDPKYWDDAESFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGISFGLANVYLPLAQLLYHFDWKLPTGMEPKDLDLTESAGITAARKGDLYLIATP 497          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.026e-24
Identity = 47/79 (59.49%), Postives = 61/79 (77.22%), Query Frame = -1
Query:  371 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPG 607
            TRV +N W IGRDP  WEN  EF P+RF+  S+D KG+DF+L+PFG GRR CPG++ G+  V+ SLANLL+ F+W+LPG
Sbjct:  392 TRVFINAWAIGRDPKSWENAEEFLPERFVNNSVDFKGQDFQLIPFGAGRRGCPGIAFGISSVEISLANLLYWFNWELPG 470          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.986e-24
Identity = 52/112 (46.43%), Postives = 74/112 (66.07%), Query Frame = -1
Query:  275 TRVLVNVWTIGRDPALW-ENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRLS 607
            T+V++N W IGR+ A W  +  EF P+R L  S+D +G++FELLPFG GRRICP +S  + + +  LANL+HGF WKLP      + ++ E+ G S  ++FPL  VA P L+
Sbjct:  379 TQVMMNAWAIGREVATWGPDAEEFKPERHLDTSVDFRGQNFELLPFGAGRRICPAVSFAVVLNEVVLANLVHGFDWKLPEESKEDKTDVAESSGFSVHREFPLYAVASPYLT 490          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.135e-23
Identity = 49/108 (45.37%), Postives = 72/108 (66.67%), Query Frame = -1
Query:  278 VLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRL 601
            V VN   IGRDP  W++P +F P+RFL   I+  G+ F+ +PFG+GRRICPG  L ++++   LA+L+H F W+LP  + N++L+MEE F LS     PL V+ + R+
Sbjct:  380 VHVNAHAIGRDPKDWKDPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELFTLSLCMAKPLRVIPKVRI 487          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.482e-23
Identity = 54/114 (47.37%), Postives = 77/114 (67.54%), Query Frame = -1
Query:  275 TRVLVNVWTIGRDPALWENPNEFYPQRFL--GKS-IDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRLS 607
            TR+ VNVW IGRDP  WENP EF P+RF   G+S +DV+G+ +  +PFG+GRR CPG SL L++V  +LA ++  F WK   +  N +++MEE  G++ P+  P+  V  PRL+
Sbjct:  386 TRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKF--DNGNNKVDMEEKSGITLPRAHPIICVPVPRLN 497          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.482e-23
Identity = 50/107 (46.73%), Postives = 70/107 (65.42%), Query Frame = -1
Query:  284 RVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQP 604
            R+++NVW++GR+P  WE P  F+P+RF   S D  G DFE +PFG GRRICPG++ GL  V+  LA LL+ F WKL   M+  +++M E  GL+  +K  L +V  P
Sbjct:  389 RIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGNDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMNPSDMDMSEAEGLTGIRKNNLLLVPTP 495          
The following BLAST results are available for this feature:
BLAST of CV885043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
C71B6_ARATH7.859e-2548.57Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71A6_NEPRA7.859e-2549.07Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C93A3_SOYBN1.026e-2451.75Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C82A1_PEA1.026e-2449.57Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C71D7_SOLCH1.026e-2449.07Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71A1_PERAE1.026e-2459.49Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71AP_ARATH2.986e-2446.43Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C80A1_BERST1.135e-2345.37Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C93A2_SOYBN1.482e-2347.37Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C71DD_MENPI1.482e-2346.73Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012B10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885043 ID=CV885043; Name=CV885043; organism=Citrus sinensis; type=EST; length=607bp
GAAACAGCCCCATGTAAGTAAGTGTTTACGGAAAGCGATGGTAAAATATC
ACCACTAACAAAGTTCATTATTTAAAAGGCACAATATCTAAGCCCAAAAA
GATTACGTTGGCTAGGGTACACTGGCTCTCGTTATATCTTCAAATTCAGG
ACCATGTTCGCACTAGCAAACCAAAGCAAGACCATCAAGAAGCGCTTATT
CAAAATATATTAAAAGCGAACCAAGCCATAATTAGTTCTTTTGGATGCCA
GAATCACAGACTATAAAGATGGAATGAAAGCCTTGGCTGAGCCACGACTT
CAAGCGGAAATTTTTTCGGAGTGGAAAGGCCAAAAGTTTCCTCCATATTA
AGCTCCTGATTGCTCATATTTCCAGGCAATTTCCATGAAAATCCATGTAA
AAGATTAGCCAAACTTGATTGAACAACCTTAAGCCCTAGACTCATCCCTG
GGCAAATTCTTCTTCCTGTACCAAAAGGCAGCAACTCAAAATCACGCCCT
TTCACATCAATTGATTTTCCAAGGAACCTCTGAGGGTAAAATTCATTAGG
ATTTTCCCACAAAGCAGGGTCTCTCCCTATCGTCCATACATTAACTAGGA
CTCGGGT
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