CV885043

Overview
NameCV885043
Unique NameCV885043
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5753 contig Csv1_Contig5753:186..792. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.356e-23
Identity = 48/102 (47.06%), Postives = 67/102 (65.69%), Query Frame = -1
Query:  302 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPL 607
            T V++N W IGRDP  W+ P +F P+RFL  S+D KG DFEL+PFG GRR CPG +  +  ++ +LANL+  F W+LP     +EL+M E  G++  +  PL
Sbjct:  396 TMVMINAWAIGRDPTSWDEPEKFRPERFLNSSVDFKGLDFELIPFGAGRRGCPGTTFPMATLEFTLANLMQKFDWELPHEC--RELDMSERPGVAIRRVIPL 495          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 9.607e-23
Identity = 49/104 (47.12%), Postives = 68/104 (65.38%), Query Frame = -1
Query:  293 RVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 604
            R+++NVW++GR+P  WE P  F+P+RF   S D  G DFE +PFG GRRICPG++ GL  V+  LA LL+ F WKL   M   +++M E  GL+  +K  L +V
Sbjct:  386 RIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLTGIRKNNLLLV 489          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.255e-22
Identity = 52/114 (45.61%), Postives = 74/114 (64.91%), Query Frame = -1
Query:  275 TRVLVNVWTIGRDPALWENPNEFYPQRFLG---KSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRLS 607
            TR+ VNVW IGRDP  WE P EF P+RF+      +DV+G+ +  +PFG+GRR CPG SL  +VV  +LA ++  F WKL G   N +++MEE  G++ P+  P+  V  PR++
Sbjct:  393 TRLFVNVWAIGRDPNHWEKPFEFRPERFIRDGQNQLDVRGQHYHFIPFGSGRRTCPGASLAWQVVPVNLAIIIQCFQWKLVG--GNGKVDMEEKSGITLPRANPIICVPVPRIN 504          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.639e-22
Identity = 55/116 (47.41%), Postives = 74/116 (63.79%), Query Frame = -1
Query:  275 RVLVNVWTIGRDPALWENPNEFYPQRFL----GKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSN--QELNMEETFGLSTPKKFPLEVVAQPRLS 604
            RVLVN W IGRDPA+WE P EF P+RF+     KS    G+DF  LPFG+GRRICPG + GL  ++  LANL++ F W++P    +   +++M+E FGL   +   L +V  PR S
Sbjct:  421 RVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVPNEKEDGCWKVSMDEKFGLMLRRNELLYLV--PRAS 534          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.140e-22
Identity = 53/108 (49.07%), Postives = 67/108 (62.04%), Query Frame = -1
Query:  284 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQP 607
            T+V+VNVW +GRDP  W++   F P+RF   SID  G +FE LPFG GRRICPG S GL      LA LL  F WKLP  M  ++L++ E  G+S   K  L ++A P
Sbjct:  391 TKVMVNVWALGRDPKYWDDVECFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGTSFGLANDYLPLAQLLCHFDWKLPTGMEPKDLDLTELAGMSAASKDDLYLIATP 498          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 2.795e-22
Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = -1
Query:  287 TRVLVNVWTIGRDPALW-ENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQ 607
            T V VN W + RD   W  NP+EF P+RFL K +D KG D+E +PFG+GRR+CPGM LG  +++   ANLL  F++KLP  M   ++NM+   GL+  K   L++V +
Sbjct:  390 TTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLSFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVPE 497          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.651e-22
Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = -1
Query:  263 TRVLVNVWTIGRDPALWENPNEFYPQRFL--GKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRLSFHLY 607
            TR++ N+  I  D  +W NP EF P+RFL   K ID+KG+ F+LLPFG GRRICPG++LGL+ V+ +LA+ LH F      N S + L+M E F  +  K  PLE++ +PRLS   Y
Sbjct:  406 TRLITNLSKIHTDHNVWSNPLEFKPERFLTTDKDIDMKGQHFQLLPFGGGRRICPGINLGLQTVRLTLASFLHSFEIL---NPSTEPLDMTEVFRATNTKATPLEILIKPRLSPSCY 519          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.651e-22
Identity = 53/114 (46.49%), Postives = 72/114 (63.16%), Query Frame = -1
Query:  260 VLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRLSFHLYS 601
            VLVN + IG D   W  P  F P+RF+  SID KG +FE LPFG GRRICPG++ G+  V+  LA LL+ F W LP  + N++L++ E FG++  KK  L ++  P +S  L S
Sbjct:  378 VLVNTFAIGTDSKYWAEPERFCPERFIDSSIDYKGTNFEHLPFGAGRRICPGINYGMANVELVLALLLYHFDWTLPKGIKNEDLDLTEEFGVTVSKKEDLCLI--PSISHPLPS 489          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.062e-21
Identity = 44/107 (41.12%), Postives = 70/107 (65.42%), Query Frame = -1
Query:  290 TRVLVNVWTIGRDPALW-ENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVA 607
            T+V++N W IGR+ A W  +  +F P+R L  S+D +G +FEL+PFG GRRICP +S  + +++ +LAN +H + WKLP +    + N+ E+ G+   + FPL  +A
Sbjct:  380 TQVMINAWAIGREAATWGPDAEKFRPERHLDSSVDFRGHNFELVPFGAGRRICPAISFAVVLIEVALANFVHRYDWKLPEDSKENQTNVAESTGMVIHRLFPLYAIA 486          
BLAST of CV885043 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.366e-21
Identity = 45/111 (40.54%), Postives = 70/111 (63.06%), Query Frame = -1
Query:  287 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSI----DVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQ 607
            TRV+VN W +GR    WE  NEF P+RFL   +    D+K  +F+ L FG+GRR+CPG+      +++ L+NL++ F W+LP  M  ++++M E FG++  +K  L +V Q
Sbjct:  426 TRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKLLLVPQ 536          
The following BLAST results are available for this feature:
BLAST of CV885043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
C71A8_MENPI7.356e-2347.06Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
C7D95_MENSP9.607e-2347.12Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C93A1_SOYBN1.255e-2245.61Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C71C3_MAIZE1.639e-2247.41Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C71D6_SOLCH2.140e-2249.07Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C83A1_ARATH2.795e-2246.30Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C82A2_SOYBN3.651e-2247.86Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C71DB_LOTJA3.651e-2246.49Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71AL_ARATH1.062e-2141.12Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C71C4_MAIZE2.366e-2140.54Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012B10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885043 ID=CV885043; Name=CV885043; organism=Citrus sinensis; type=EST; length=607bp
GAAACAGCCCCATGTAAGTAAGTGTTTACGGAAAGCGATGGTAAAATATC
ACCACTAACAAAGTTCATTATTTAAAAGGCACAATATCTAAGCCCAAAAA
GATTACGTTGGCTAGGGTACACTGGCTCTCGTTATATCTTCAAATTCAGG
ACCATGTTCGCACTAGCAAACCAAAGCAAGACCATCAAGAAGCGCTTATT
CAAAATATATTAAAAGCGAACCAAGCCATAATTAGTTCTTTTGGATGCCA
GAATCACAGACTATAAAGATGGAATGAAAGCCTTGGCTGAGCCACGACTT
CAAGCGGAAATTTTTTCGGAGTGGAAAGGCCAAAAGTTTCCTCCATATTA
AGCTCCTGATTGCTCATATTTCCAGGCAATTTCCATGAAAATCCATGTAA
AAGATTAGCCAAACTTGATTGAACAACCTTAAGCCCTAGACTCATCCCTG
GGCAAATTCTTCTTCCTGTACCAAAAGGCAGCAACTCAAAATCACGCCCT
TTCACATCAATTGATTTTCCAAGGAACCTCTGAGGGTAAAATTCATTAGG
ATTTTCCCACAAAGCAGGGTCTCTCCCTATCGTCCATACATTAACTAGGA
CTCGGGT
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