CV885042

Overview
NameCV885042
Unique NameCV885042
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5753 contig Csv1_Contig5753:185..815. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.799e-28
Identity = 55/108 (50.93%), Postives = 75/108 (69.44%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQP 325
            T+ ++N W IGRDP  WENP E+ P+RFL    DVKG +F+LLPFG GRR CPG S  + V++ +LA L+H F + LP  +  ++L+M ET G++T +K PL VVA P
Sbjct:  397 TQAIINAWAIGRDPLSWENPEEYQPERFLNSDADVKGLNFKLLPFGAGRRGCPGSSFAIAVIELALARLVHKFDFALPEGIKPEDLDMTETIGITTRRKLPLLVVATP 504          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.656e-28
Identity = 58/119 (48.74%), Postives = 81/119 (68.07%), Query Frame = 2
Query:    8 VLVNVWTIGRDPALWENPNEFYPQRFLG----KSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRLSFHLYSL 352
            +L N+W I RDP  W +P  F P+RFL       +DVKG DFEL+PFG GRRIC G+SLGL+ +Q   A L+ GF W+L G ++ ++LNMEE++GL+  +  PL V  +PRL+ ++Y L
Sbjct:  392 LLTNIWAIARDPDQWSDPLAFKPERFLPGGEKSGVDVKGSDFELIPFGAGRRICAGLSLGLRTIQFLTATLVQGFDWELAGGVTPEKLNMEESYGLTLQRAVPLVVHPKPRLAPNVYGL 510          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.656e-28
Identity = 59/120 (49.17%), Postives = 79/120 (65.83%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKS---IDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRLSFHLYSL 352
            TR++VN+W IGRDP +WENP +F P+RFL +    ID +G  FEL+PFG GRRIC G  +G   V+  L  L+H F WKLP  +   E+NMEE+FG++  KK PL  +  PRL    Y++
Sbjct:  406 TRLIVNIWAIGRDPKVWENPLDFTPERFLSEKHAKIDPRGNHFELIPFGAGRRICAGARMGAASVEYILGTLVHSFDWKLPDGV--VEVNMEESFGIALQKKVPLSAIVTPRLPPSSYTV 523          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.656e-28
Identity = 54/104 (51.92%), Postives = 76/104 (73.08%), Query Frame = 2
Query:    5 RVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 316
            R+LVN W IGRDP LW +P EF P+RF+   +D +G+ FELLPFG+GRRICPGM++G+  ++  L NLL+ F WKLP  MS+++++ EE   L+  KK  L++V
Sbjct:  394 RILVNAWAIGRDPKLWTDPEEFKPERFIDSPVDYRGQHFELLPFGSGRRICPGMAMGMATLELGLLNLLYFFDWKLPDGMSHKDIDTEEAGTLTVVKKVHLKLV 497          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.236e-28
Identity = 55/105 (52.38%), Postives = 77/105 (73.33%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 316
            TR+ VNVW IGRDP  W++P EF P+RF+  SID KG+ FELLPFG+GRR+CP M +G  +V+  LAN+L+ F WK+P  M  +++++EE+ GL+  KK  L +V
Sbjct:  389 TRLYVNVWAIGRDPDTWKDPEEFLPERFVNSSIDAKGQHFELLPFGSGRRMCPAMYMGTTMVEFGLANMLYHFDWKIPVGMVAEDIDLEESPGLNASKKNELVLV 493          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 8.144e-28
Identity = 55/98 (56.12%), Postives = 74/98 (75.51%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPK 295
            T+V+VNVW IGRD ++WENP +F P+RFL +  DVKGRDFEL+PFG+GRR+CPG+S+ LK +   LA+LL+ F WKL   +    ++M ETFGL+  K
Sbjct:  400 TQVVVNVWAIGRDASVWENPMKFEPERFLLRETDVKGRDFELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQNGVVPGNIDMSETFGLTLHK 497          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.144e-28
Identity = 52/105 (49.52%), Postives = 77/105 (73.33%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 316
            T + VN+W I R+P +W++P  F P+RF+   ID KG +FELLPFG+GRRICPG+ +G+ +V  +L NLL+ F WKLP  M   ++++EE++GL  PKK PL+++
Sbjct:  385 TWIHVNIWAIHRNPNVWKDPEAFIPERFMDSQIDYKGLNFELLPFGSGRRICPGIGMGMALVHLTLINLLYRFDWKLPEGMKVADVDLEESYGLVCPKKIPLQLI 489          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.064e-27
Identity = 55/104 (52.88%), Postives = 76/104 (73.08%), Query Frame = 2
Query:    5 RVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 316
            R+LVNV  IGRDP LW NP EF P+RF+   +D +G+ +ELLPFG+GRRICPGM +G+  V+  L NLL+ F WKLP  M++++++ EE   L+  KK PL++V
Sbjct:  394 RILVNVSAIGRDPKLWTNPKEFDPERFMDSFVDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDWKLPDGMTHKDIDTEEAGTLTIVKKVPLKLV 497          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.389e-27
Identity = 57/105 (54.29%), Postives = 73/105 (69.52%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 316
            TRV VN W IGRDPA W  P+EF P RF+G  +D  G  FEL+PFG GRRICPG+++G   V  +LANLL+ + W LPG M  ++++MEET  L+  +K PL VV
Sbjct:  417 TRVFVNAWAIGRDPASWPAPDEFNPDRFVGSDVDYYGSHFELIPFGAGRRICPGLTMGETNVTFTLANLLYCYDWALPGAMKPEDVSMEETGALTFHRKTPLVVV 521          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.814e-27
Identity = 53/105 (50.48%), Postives = 73/105 (69.52%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 316
            T + VN+W +   P++W++P  F P+RF+    D KG +FELLPFG+GRR+CPGM +GL VV  +L NLL+ F WKLP  M  +EL++EE +GL   KK PLE +
Sbjct:  385 TWIHVNMWAVHMSPSIWKDPETFNPERFIDNQTDFKGLNFELLPFGSGRRMCPGMGMGLAVVHLTLINLLYRFDWKLPNGMKAEELSIEENYGLICVKKLPLEAI 489          
The following BLAST results are available for this feature:
BLAST of CV885042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
C71A2_SOLME2.799e-2850.93Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
F3PH_ARATH3.656e-2848.74Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C75A6_CAMME3.656e-2849.17Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71BH_ARATH3.656e-2851.92Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C71BX_ARATH6.236e-2852.38Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C76C3_ARATH8.144e-2856.12Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C71BC_ARATH8.144e-2849.52Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C71BJ_ARATH1.064e-2752.88Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C71E1_SORBI1.389e-2754.294-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71B1_THLAR1.814e-2750.48Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012B10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885042 ID=CV885042; Name=CV885042; organism=Citrus sinensis; type=EST; length=631bp
CACCCGAGTCCTAGTTAATGTATGGACGATAGGGAGAGACCCTGCTTTGT
GGGAAAATCCTAATGAATTTTACCCTCAGAGGTTCCTTGGAAAATCAATT
GATGTGAAAGGGCGTGATTTTGAGTTGCTGCCTTTTGGTACAGGAAGAAG
AATTTGCCCAGGGATGAGTCTAGGGCTTAAGGTTGTTCAATCAAGTTTGG
CTAATCTTTTACATGGATTTTCATGGAAATTGCCTGGAAATATGAGCAAT
CAGGAGCTTAATATGGAGGAAACTTTTGGCCTTTCCACTCCGAAAAAATT
TCCGCTTGAAGTCGTGGCTCAGCCAAGGCTTTCATTCCATCTTTATAGTC
TGTGATTCTGGCATCCAAAAGAACTAATTATGGCTTGGTTCGCTTTTAAT
ATATTTTGAATAAGCGCTTCTTGATGGTCTTGCTTTGGTTTGCTAGTGCG
AACATGGTCCTGAATTTGAAGATATAACGAGAGCCAGTGTACCCTAGCCA
ACGTAATCTTTTTGGGCTTAGATATTGTGCCTTTTAAATAATGAACTTTG
TTAGTGGTGATATTTTACCATCGCTTTCCGTAAACACTTACTTACATGGG
GCTGTTTTCAATGAAAAAAAATAAAAAAAAA
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