CV885042

Overview
NameCV885042
Unique NameCV885042
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5753 contig Csv1_Contig5753:185..815. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.005e-27
Identity = 58/108 (53.70%), Postives = 74/108 (68.52%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQP 325
            TRVLVN  +I  DP  WENPNEF P+RFL   ID KG+ FE+LPFG GRR CPG++  + VV+ +LANLL  F W+LP  +  Q+L+MEE  G++  KK  L + A P
Sbjct:  389 TRVLVNAKSIAMDPCCWENPNEFLPERFLVSPIDFKGQHFEMLPFGVGRRGCPGVNFAMPVVELALANLLFRFDWELPLGLGIQDLDMEEAIGITIHKKAHLWLKATP 496          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.536e-26
Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 316
            TR+ VNVW IGRDP  W++P  F P+RF   +ID KG++FELL FG+GRRICPG+ +G  +V+  LAN+L+ F WKLP  M  ++++MEE  GL+  KK  L +V
Sbjct:  389 TRLHVNVWAIGRDPDTWKDPEMFLPERFNDSNIDAKGQNFELLSFGSGRRICPGLYMGTTMVEFGLANMLYHFDWKLPEGMVVEDIDMEEAPGLTVSKKSELVLV 493          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.006e-26
Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 2
Query:    8 VLVNVWTIGRDPALWENPNEFYPQRFLG----KSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRLSFHLY 346
            +L+NVW I RDP  W +P EF P+RFL       +DV+G DFE++PFG GRRIC GM+LG+++VQ  +A L+H F+W L      + LNMEE +GL+  +  PL V  +PRL    Y
Sbjct:  394 LLLNVWAIARDPNAWADPLEFRPERFLPGGEKPKVDVRGNDFEVIPFGAGRRICAGMNLGIRMVQLMIATLIHAFNWDLVSGQLPEMLNMEEAYGLTLQRADPLVVHPRPRLEAQAY 510          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.006e-26
Identity = 56/111 (50.45%), Postives = 77/111 (69.37%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRLS 334
            TR+ VNVW IGRDP  W++P  F P+RF+  +ID KG+ FELLPFG GRRICP + +G  +V+  LANLL+ F WKLP  +  +++++EE  GL+  KK  L +V + R S
Sbjct:  388 TRLHVNVWAIGRDPDTWKDPEVFLPERFMDNNIDAKGQHFELLPFGGGRRICPAIYMGTTMVEFGLANLLYHFDWKLPEGVEVKDIDVEEAPGLTVNKKNELLLVPEMRRS 498          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.422e-26
Identity = 52/103 (50.49%), Postives = 73/103 (70.87%), Query Frame = 2
Query:    8 VLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 316
            V +N + IGRDP  W NP EF P+RFL  SI+ KG+ +ELLPFG GRR CPGM+LG+ +++  L N+L+ F W LP  M+ ++++MEE   L+  KK PL++V
Sbjct:  392 VKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQLV 494          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.623e-26
Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 316
            +RV+VN W IGRDP LW     FYP+RF+ +SI+ K   FE +PFG GRR+CPG++ GL  V+  LA L++ F WKLP    N++L M E FG++  +K  L ++
Sbjct:  386 SRVIVNAWAIGRDPRLWTEAERFYPERFIERSIEYKSNSFEFIPFGAGRRMCPGLTFGLSNVEYVLAMLMYHFDWKLPKGTKNEDLGMTEIFGITVARKDDLYLI 490          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.623e-26
Identity = 55/105 (52.38%), Postives = 72/105 (68.57%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 316
            TR+ VNVW IGRDP  W++P  F P+RF   +ID KG+ FELLPFG GRR+CP + +G  +V+  LANLL+ F WKLP  M   +++MEE  GL+  KK  L +V
Sbjct:  389 TRLHVNVWAIGRDPDTWKDPEVFLPERFTDNNIDAKGQHFELLPFGGGRRMCPAVYMGTTMVEFGLANLLYHFDWKLPEGMKVDDIDMEEAPGLTVNKKNELILV 493          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.956e-26
Identity = 58/117 (49.57%), Postives = 81/117 (69.23%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLG--KSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRLSFHLY 346
            TR++ N+W I RDP++W +P EF P+RFL   K +D++G +FELLPFG+GRR+C GMSLGL +V  +LANLLH F      N S + ++M E FG +  K  PLE++ +PR S + Y
Sbjct:  411 TRLIHNLWKIHRDPSVWSDPLEFKPERFLTTHKDVDLRGHNFELLPFGSGRRVCAGMSLGLNMVHFTLANLLHSFDIL---NPSAEPVDMTEFFGFTNTKATPLEILVKPRQSPNYY 524          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 9.956e-26
Identity = 52/109 (47.71%), Postives = 75/109 (68.81%), Query Frame = 2
Query:    8 VLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRLS 334
            +LVN W+IGRDP  W+NP EF P+RF+   +D KG  FELLPFG+GRRICPG+++ +  ++  L NLL+ F W +P     ++++MEE   L+  KK PLE++   R+S
Sbjct:  397 LLVNAWSIGRDPESWKNPEEFNPERFIDCPVDYKGHSFELLPFGSGRRICPGIAMAIATIELGLLNLLYFFDWNMP--EKKKDMDMEEAGDLTVDKKVPLELLPVIRIS 503          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.300e-25
Identity = 54/105 (51.43%), Postives = 75/105 (71.43%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 316
            T +LVNVW+IGRDP  W+NP EF P+RF+   ID KG  FE+LPFG+GRRICPG++  +  V+  L NLL+ F W+LP    +++L+MEE   ++  KK PL++V
Sbjct:  391 TILLVNVWSIGRDPKHWKNPEEFNPERFIDCPIDYKGNSFEMLPFGSGRRICPGIAFAIATVELGLLNLLYHFDWRLP--EEDKDLDMEEAGDVTIIKKVPLKLV 493          
The following BLAST results are available for this feature:
BLAST of CV885042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
C71A9_SOYBN9.005e-2753.70Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C71BQ_ARATH1.536e-2652.38Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
F3PH_PETHY2.006e-2647.86Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C71BW_ARATH2.006e-2650.45Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71BU_ARATH3.422e-2650.49Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71D9_SOYBN7.623e-2647.62Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71BV_ARATH7.623e-2652.38Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C82A3_SOYBN9.956e-2649.57Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C71B4_ARATH9.956e-2647.71Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71BO_ARATH1.300e-2551.43Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012B10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885042 ID=CV885042; Name=CV885042; organism=Citrus sinensis; type=EST; length=631bp
CACCCGAGTCCTAGTTAATGTATGGACGATAGGGAGAGACCCTGCTTTGT
GGGAAAATCCTAATGAATTTTACCCTCAGAGGTTCCTTGGAAAATCAATT
GATGTGAAAGGGCGTGATTTTGAGTTGCTGCCTTTTGGTACAGGAAGAAG
AATTTGCCCAGGGATGAGTCTAGGGCTTAAGGTTGTTCAATCAAGTTTGG
CTAATCTTTTACATGGATTTTCATGGAAATTGCCTGGAAATATGAGCAAT
CAGGAGCTTAATATGGAGGAAACTTTTGGCCTTTCCACTCCGAAAAAATT
TCCGCTTGAAGTCGTGGCTCAGCCAAGGCTTTCATTCCATCTTTATAGTC
TGTGATTCTGGCATCCAAAAGAACTAATTATGGCTTGGTTCGCTTTTAAT
ATATTTTGAATAAGCGCTTCTTGATGGTCTTGCTTTGGTTTGCTAGTGCG
AACATGGTCCTGAATTTGAAGATATAACGAGAGCCAGTGTACCCTAGCCA
ACGTAATCTTTTTGGGCTTAGATATTGTGCCTTTTAAATAATGAACTTTG
TTAGTGGTGATATTTTACCATCGCTTTCCGTAAACACTTACTTACATGGG
GCTGTTTTCAATGAAAAAAAATAAAAAAAAA
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