CV885042

Overview
NameCV885042
Unique NameCV885042
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5753 contig Csv1_Contig5753:185..815. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.698e-25
Identity = 51/105 (48.57%), Postives = 74/105 (70.48%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 316
            T +LV+ W++GRDP  W+NP EF P+RF+   +D KG  FE LPFG+GRR CPGM+  +  ++ +L NLL+ F WKLP  M  +++NMEE+  ++  KK PLE++
Sbjct:  394 TLLLVSAWSLGRDPKYWKNPEEFNPERFIDCPVDYKGHSFEFLPFGSGRRFCPGMASAIATIELTLLNLLYFFDWKLPEEM--KDMNMEESGDVTIVKKVPLELL 496          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.218e-25
Identity = 49/103 (47.57%), Postives = 72/103 (69.90%), Query Frame = 2
Query:    8 VLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 316
            + ++ + IGRDP  W NP EF P+RF   SI+ KG+ +ELLPFG GRR CPGM+LG+ +++  L N+L+ F W LP  M+ ++++MEE   L+  KK PLE++
Sbjct:  394 IKISTYAIGRDPKCWTNPEEFNPERFANTSINYKGQHYELLPFGAGRRSCPGMTLGITILELGLLNILYYFDWSLPNGMTIKDIDMEEDGALTIAKKVPLELI 496          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.897e-25
Identity = 54/111 (48.65%), Postives = 73/111 (65.77%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSI-DVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRL 331
            +RV++N + IGRDP  W +P+ F P RFL   + D KG +FE +PFG+GRR CPGM LGL  +  ++A++LH F+WKLP  M   EL+M + FGL+ PK   L  V   RL
Sbjct:  406 SRVMINAFAIGRDPTSWTDPDTFRPSRFLEPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHILHCFTWKLPDGMKPSELDMNDVFGLTAPKATRLFAVPTTRL 516          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.783e-25
Identity = 50/110 (45.45%), Postives = 72/110 (65.45%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRL 331
            TR+++N W IGR+P  W     F P+RFL  SID +G DFE +PFG GRRICPG++  +  ++  LA LL+ F WKLP  M N+EL+M E+ G++  ++  L ++   RL
Sbjct:  400 TRIIINAWAIGRNPKYWGETESFKPERFLNSSIDFRGTDFEFIPFGAGRRICPGITFAIPNIELPLAQLLYHFDWKLPNKMKNEELDMTESNGITLRRQNDLCLIPITRL 509          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.783e-25
Identity = 50/105 (47.62%), Postives = 71/105 (67.62%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 316
            T + +N +TIGRDP  W  P+EF P+RF+   I+ KG+ FELLPFG GRR+CPGM+ G+ +V+  L +LL+ F W LP  M+ ++++MEE       KK  LE+V
Sbjct:  388 TMIQINTYTIGRDPKNWTKPDEFIPERFVDNPIEYKGQHFELLPFGAGRRVCPGMATGITIVELGLLSLLYFFDWSLPNGMTTKDIDMEEDGAFVIAKKVSLELV 492          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.941e-25
Identity = 49/105 (46.67%), Postives = 71/105 (67.62%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 316
            T+V++N W IGRDP  W + + F P+RF   SID KG  FE +PFG GRR+CPGM+ GL  +   LA LL+ F+W+LP  M  ++L+M+E FG++  +K  L ++
Sbjct:  393 TKVMINTWAIGRDPQYWSDADRFIPERFNDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWELPNKMKPEDLDMDEHFGMTVARKNKLFLI 497          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.453e-25
Identity = 49/105 (46.67%), Postives = 74/105 (70.48%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 316
            T+VLVN W IGRDP  W++P  F P+RFLG  IDVKG+ + L+PFG GRR+C G+ LG +++  +L +LL  F W+LP  +S + +NM+ + G++  K+  L+V+
Sbjct:  397 TQVLVNAWAIGRDPECWDDPMSFKPERFLGSKIDVKGQHYGLIPFGAGRRMCVGLPLGHRMMHFALGSLLREFEWELPDGVSPKSINMDGSMGVTARKRDSLKVI 501          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 6.453e-25
Identity = 52/105 (49.52%), Postives = 74/105 (70.48%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVV 316
            T +LVN W+IGR+P LWENP EF P+RF+   +D KG  FE+LPFG+GR+ICPG++ G+  V+  L NLL+ F W+L     +++++MEE    +  KK PLE+V
Sbjct:  394 TILLVNAWSIGRNPELWENPEEFNPERFIDCPMDYKGNSFEMLPFGSGRKICPGIAFGIATVELGLLNLLYYFDWRLA--EEDKDIDMEEAGDATIVKKVPLELV 496          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 8.428e-25
Identity = 58/117 (49.57%), Postives = 76/117 (64.96%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLG--KSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRLSFHLY 346
            TR++ N+W I  DP +W +P EF P RFL   K IDVKG  F+LLPFG+GRR+CPG+S GL+ V  +LA+ LH F      N S + L+M E FG++  K  PLEV+ +P LS   Y
Sbjct:  409 TRLITNIWKIHTDPNVWSDPFEFKPDRFLTTHKDIDVKGHHFQLLPFGSGRRVCPGISFGLQTVHLALASFLHSFEIL---NPSTEPLDMTEAFGVTNTKATPLEVLVKPCLSPSCY 522          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 8.428e-25
Identity = 52/99 (52.53%), Postives = 68/99 (68.69%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKK 298
            TR+L+N W+IGRDP  WE+P+ F P+RF   S D  G DFE +PFG G+RICPG+  GL  V+  LA LL+ F WKLP  M++ +L +  T GLS P+K
Sbjct:  383 TRILINAWSIGRDPLYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGQRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLYVAGTPGLSGPRK 481          
The following BLAST results are available for this feature:
BLAST of CV885042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
C71BP_ARATH1.698e-2548.57Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71B8_ARATH2.218e-2547.57Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C84A1_ARATH2.897e-2548.65Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71DA_SOYBN3.783e-2545.45Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71B5_ARATH3.783e-2547.62Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71D8_SOYBN4.941e-2546.67Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C76A2_SOLME6.453e-2546.67Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C71B3_ARATH6.453e-2549.52Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C82A4_SOYBN8.428e-2549.57Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C7D94_MENGR8.428e-2552.53Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012B10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885042 ID=CV885042; Name=CV885042; organism=Citrus sinensis; type=EST; length=631bp
CACCCGAGTCCTAGTTAATGTATGGACGATAGGGAGAGACCCTGCTTTGT
GGGAAAATCCTAATGAATTTTACCCTCAGAGGTTCCTTGGAAAATCAATT
GATGTGAAAGGGCGTGATTTTGAGTTGCTGCCTTTTGGTACAGGAAGAAG
AATTTGCCCAGGGATGAGTCTAGGGCTTAAGGTTGTTCAATCAAGTTTGG
CTAATCTTTTACATGGATTTTCATGGAAATTGCCTGGAAATATGAGCAAT
CAGGAGCTTAATATGGAGGAAACTTTTGGCCTTTCCACTCCGAAAAAATT
TCCGCTTGAAGTCGTGGCTCAGCCAAGGCTTTCATTCCATCTTTATAGTC
TGTGATTCTGGCATCCAAAAGAACTAATTATGGCTTGGTTCGCTTTTAAT
ATATTTTGAATAAGCGCTTCTTGATGGTCTTGCTTTGGTTTGCTAGTGCG
AACATGGTCCTGAATTTGAAGATATAACGAGAGCCAGTGTACCCTAGCCA
ACGTAATCTTTTTGGGCTTAGATATTGTGCCTTTTAAATAATGAACTTTG
TTAGTGGTGATATTTTACCATCGCTTTCCGTAAACACTTACTTACATGGG
GCTGTTTTCAATGAAAAAAAATAAAAAAAAA
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