CV885042

Overview
NameCV885042
Unique NameCV885042
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5753 contig Csv1_Contig5753:185..815. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.589e-23
Identity = 47/78 (60.26%), Postives = 62/78 (79.49%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLP 235
            T++++NV+ I RDP LW NP+EF P RFL  SID KG +FELLPFG+GRRICPGM++G+ +V+ +L NLL+ F W LP
Sbjct:  389 TQIMINVYAIARDPKLWTNPDEFNPDRFLDSSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDWGLP 466          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.076e-23
Identity = 52/108 (48.15%), Postives = 68/108 (62.96%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQP 325
            T V VN W IGRDP +W++  EF PQRFL   +DV+G DF+L+PFG GRRICPG+ L  ++V   L +LL+ F WK+   +    L+M E  G +  K  PL VV  P
Sbjct:  381 TLVFVNAWAIGRDPTVWDDSLEFKPQRFLESRLDVRGHDFDLIPFGAGRRICPGIPLATRMVPIMLGSLLNNFDWKIDTKVPYDVLDMTEKNGTTISKAKPLCVVPIP 488          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.711e-23
Identity = 50/102 (49.02%), Postives = 69/102 (67.65%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALW-ENPNEFYPQRFLG--KSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKK 298
            T + VN W + RD A W +NPNEF P+RF+   K +D KG+DFELLPFG+GRR+CP M LG+ +V+   ANLL+ F W LP  +  +++ M+   GL+  KK
Sbjct:  387 TIIQVNAWAVSRDTAAWGDNPNEFIPERFMNEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKK 488          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.711e-23
Identity = 50/107 (46.73%), Postives = 69/107 (64.49%), Query Frame = 2
Query:    5 RVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQP 325
            R+++NVW++GR+P  WE P  F+P+RF   S D  G DFE +PFG GRRICPG++ GL  V+  LA LL+ F WKL   M   +++M E  GL+  +K  L +V  P
Sbjct:  386 RIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLTGIRKNNLLLVPTP 492          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.541e-23
Identity = 48/109 (44.04%), Postives = 68/109 (62.39%), Query Frame = 2
Query:    5 RVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRL 331
            +++VN W IGRDP  W +P  F P+RFL  S+D +G DF L+PFG GRRICPG+ +  + +   +A  +    W LP  MS   L +EE FGL+  K+ PL +V + R+
Sbjct:  379 QIMVNAWGIGRDPKTWTDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPLFIVPKSRV 487          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.625e-23
Identity = 52/115 (45.22%), Postives = 77/115 (66.96%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGK----SIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRLS 334
            TRVLV+ W +GRD   WE P EF P+RF+ +     + +KG+D   +PFG+GRRICPGM+ G   ++  LANL++ F W++PG  S   ++MEE+FGL+  +K  L +V  PR++
Sbjct:  425 TRVLVHAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDWEVPG--SGAGVSMEESFGLTLRRKEKLLLV--PRIA 535          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.625e-23
Identity = 46/86 (53.49%), Postives = 63/86 (73.26%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQEL 259
            T++++N + I RDP LW NP+EF P RFL  SID +G +FELLPFG+GRRICPGM++G+ +V+  L NLL+ F W LP     +E+
Sbjct:  389 TQIMINAYAIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGLPEKEEAKEI 474          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.040e-23
Identity = 48/109 (44.04%), Postives = 68/109 (62.39%), Query Frame = 2
Query:    5 RVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQPRL 331
            +++VN W IGRDP  W +P  F P+RFL  S+D +G DF L+PFG GRRICPG+ +  + +   +A  +    W LP  MS   L +EE FGL+  K+ PL +V + R+
Sbjct:  380 QIMVNAWGIGRDPKTWIDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPLFIVPKSRV 488          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.040e-23
Identity = 50/107 (46.73%), Postives = 69/107 (64.49%), Query Frame = 2
Query:    5 RVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQELNMEETFGLSTPKKFPLEVVAQP 325
            R+++NVW++GR+P  WE P+ F+P+RF   S D  G DFE +PFG GRRICPG++ GL  V+  LA LL+ F WKL   M   +++M E  GL+   K  L +V  P
Sbjct:  387 RIMINVWSMGRNPLYWEKPDTFWPERFDQVSKDFMGNDFEFVPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLTGILKNNLLLVPTP 493          
BLAST of CV885042 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.040e-23
Identity = 49/93 (52.69%), Postives = 68/93 (73.12%), Query Frame = 2
Query:    2 TRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFSWKLPGNMSNQE-LNMEETF 277
            T++LVNV+ +GRDP LWEN +EF P RFL  S+D KG+++E +PFG+GRRICPGM++G  +V+ +L NLL+ F W L      +E +N EE F
Sbjct:  389 TQILVNVYAMGRDPKLWENADEFNPDRFLDSSVDFKGKNYEFIPFGSGRRICPGMTMGTILVEMALLNLLYFFDWGLAKQEEAKEIINGEENF 481          
The following BLAST results are available for this feature:
BLAST of CV885042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
C71BT_ARATH1.589e-2360.26Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C76B1_HELTU2.076e-2348.157-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C83B1_ARATH2.711e-2349.02Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C7D95_MENGR2.711e-2346.73Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C80B1_ESCCA3.541e-2344.04(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C71C2_MAIZE4.625e-2345.22Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C71BS_ARATH4.625e-2353.49Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C80B2_ESCCA6.040e-2344.04(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C71DF_MENPI6.040e-2346.73Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71BF_ARATH6.040e-2352.69Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012B10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885042 ID=CV885042; Name=CV885042; organism=Citrus sinensis; type=EST; length=631bp
CACCCGAGTCCTAGTTAATGTATGGACGATAGGGAGAGACCCTGCTTTGT
GGGAAAATCCTAATGAATTTTACCCTCAGAGGTTCCTTGGAAAATCAATT
GATGTGAAAGGGCGTGATTTTGAGTTGCTGCCTTTTGGTACAGGAAGAAG
AATTTGCCCAGGGATGAGTCTAGGGCTTAAGGTTGTTCAATCAAGTTTGG
CTAATCTTTTACATGGATTTTCATGGAAATTGCCTGGAAATATGAGCAAT
CAGGAGCTTAATATGGAGGAAACTTTTGGCCTTTCCACTCCGAAAAAATT
TCCGCTTGAAGTCGTGGCTCAGCCAAGGCTTTCATTCCATCTTTATAGTC
TGTGATTCTGGCATCCAAAAGAACTAATTATGGCTTGGTTCGCTTTTAAT
ATATTTTGAATAAGCGCTTCTTGATGGTCTTGCTTTGGTTTGCTAGTGCG
AACATGGTCCTGAATTTGAAGATATAACGAGAGCCAGTGTACCCTAGCCA
ACGTAATCTTTTTGGGCTTAGATATTGTGCCTTTTAAATAATGAACTTTG
TTAGTGGTGATATTTTACCATCGCTTTCCGTAAACACTTACTTACATGGG
GCTGTTTTCAATGAAAAAAAATAAAAAAAAA
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