CV885035
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885035 vs. ExPASy Swiss-Prot
Match: DCAM2_BRAJU (S-adenosylmethionine decarboxylase proenzyme 2 OS=Brassica juncea GN=SAMDC2 PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 4.464e-63 Identity = 121/198 (61.11%), Postives = 149/198 (75.25%), Query Frame = -1 Query: 271 TKRWHVYSASAEA----GSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELG-NNGSLIYYSFSRAD--CSTSPRSILKCCWS 843 TK+WHVYSASA A G++ N VYTLEMCMTGLD+++ASVFYK SSA MT++SGIRKILP+S+ICDFEF+PCGYSMNS+EGDA+STIHVTPEDGFSYASFEAVGYDF + L+ L+ +VL CF+P +FSVA+HS + + +DL+ Y C E E LG G+++Y SF + C SPRS LKC WS Sbjct: 158 TKKWHVYSASAPARNGNGNNNNNVYTLEMCMTGLDKEKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGDAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYDSGLSVDLEDYGCRETTIELLGEERGTVMYQSFEKLGRYCG-SPRSTLKCEWS 354
BLAST of CV885035 vs. ExPASy Swiss-Prot
Match: DCAM2_ARATH (S-adenosylmethionine decarboxylase proenzyme 2 OS=Arabidopsis thaliana GN=SAMDC2 PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 4.464e-63 Identity = 119/194 (61.34%), Postives = 144/194 (74.23%), Query Frame = -1 Query: 271 TKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELG-NNGSLIYYSFSRAD--CSTSPRSILKCCWS 843 TK+WHVYSAS+ ++ N VYTLEMCMTGLD+ +ASVFYK SSA MT++SGIRKILP+S+ICDFEF+PCGYSMNSIEGDA+STIHVTPEDGFSYASFEAVGYDF + L+ L+ +VL CFKP +FSVA+HS + + +DL Y C E E LG G+++Y F + C SPRS LKC WS Sbjct: 158 TKKWHVYSASSANSNNKNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSIEGDAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFKPKQFSVAVHSTVAQKSYDSGLSVDLDDYGCKESTMESLGEERGTVMYQRFEKLGRYCG-SPRSTLKCEWS 350
BLAST of CV885035 vs. ExPASy Swiss-Prot
Match: DCAM_DAUCA (S-adenosylmethionine decarboxylase proenzyme OS=Daucus carota GN=SAMDC PE=2 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.696e-62 Identity = 114/190 (60.00%), Postives = 145/190 (76.32%), Query Frame = -1 Query: 274 KRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSR-ADCSTSPRSILKCCW 840 ++WHVYSA A + ++PVYT+EMCMT L+R +ASVFYKTN SSA +T++SG+R ILP S ICDFEFDPCGYSMN++EG AVSTIH+TPEDGFSY+SFEAVGYD + V L+ L+ RVL CF+P EFS+AL +DI + T + +KGY EK EELG +GS++Y F + + SPRS+LKCCW Sbjct: 161 QKWHVYSACAASTRTLDPVYTMEMCMTSLNRDKASVFYKTNSSSATSVTDNSGLRDILPNSRICDFEFDPCGYSMNAVEGPAVSTIHITPEDGFSYSSFEAVGYDPKSVNLSDLVARVLNCFQPGEFSIALQADIASELLEKTSSVHVKGYRVEEKTCEELGMDGSIVYQKFVKTTERCESPRSVLKCCW 350
BLAST of CV885035 vs. ExPASy Swiss-Prot
Match: DCAM_VICFA (S-adenosylmethionine decarboxylase proenzyme OS=Vicia faba GN=SAMDC PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 2.215e-62 Identity = 114/187 (60.96%), Postives = 140/187 (74.87%), Query Frame = -1 Query: 280 KRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRADCSTSPRSILKC 840 + WHVY ASA++ S + VYTLEMCMTGLDR++ASVF+K SAA MT +SGIRKILP SEICDF+F+PCGYSMNS+EG AVSTIH+TPEDGFSYASFE GYD + + L ++ RVLACF+P EFSVA+H D +LD+KGY C EK ++ LG +GS++Y F +A SPRS LKC Sbjct: 159 QNWHVYCASADSVSPADSVYTLEMCMTGLDREKASVFFKQQTGSAAEMTVNSGIRKILPNSEICDFDFEPCGYSMNSVEGPAVSTIHITPEDGFSYASFETAGYDLKAMNLNEMVMRVLACFQPTEFSVAVHVDNASKSFEQGCLLDVKGYCCDEKSHQGLGMSGSVVYQKFVKASDCGSPRSTLKC 345
BLAST of CV885035 vs. ExPASy Swiss-Prot
Match: DCAM3_BRAJU (S-adenosylmethionine decarboxylase proenzyme 3 OS=Brassica juncea GN=SAMDC3 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 5.457e-61 Identity = 117/195 (60.00%), Postives = 150/195 (76.92%), Query Frame = -1 Query: 271 KRWHVYSASAEAGSHVNP-VYTLEMCMTGLDRKRASVFYKTNESSA--AMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELG-NNGSLIYYSFSR-ADCSTSPRSILKCCWS 840 K+WHVY+ASA+ S N VYTLEMCMTGLD+++ASVFYK NE+ MT++SGIRKILPKS+ICDFEF+PCGYSMNS+EGDA+STIHVTPEDGFSYASFEAVGYDF + L+ L+ RVL+CF+P +FSVA+HS + + + +DL+ Y C E+ +E LG +G+++Y +F + SPRS LKC WS Sbjct: 159 KKWHVYAASAQTSSDCNNNVYTLEMCMTGLDKEKASVFYK-NETGGENGSMTDNSGIRKILPKSQICDFEFEPCGYSMNSVEGDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSVGSNAYKPEISVDLEDYGCRERTFESLGEESGTVMYQTFEKLGKYCGSPRSTLKCEWS 352
BLAST of CV885035 vs. ExPASy Swiss-Prot
Match: DCAM2_DIACA (S-adenosylmethionine decarboxylase proenzyme 2 OS=Dianthus caryophyllus GN=SAMDC2 PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.588e-60 Identity = 116/194 (59.79%), Postives = 147/194 (75.77%), Query Frame = -1 Query: 274 KRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEH--GDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRAD---CSTSPRSILKCCW 840 ++WHVYSA+AE ++ +PVYTLEMCMTGLD+++ASVF+K+ +SAA+MTE SGIRKILP S ICDF+F+PCGYSMN+IEG AVSTIH+TPEDGFSYASFEAVGYD +VV L L+ERVLACF+P EFS+A+H+D + +++ GYS E EELG GS+ Y F + C +P+ LKCCW Sbjct: 174 QKWHVYSATAET-NYDDPVYTLEMCMTGLDKEKASVFFKSQSASAAVMTESSGIRKILPDSVICDFDFEPCGYSMNAIEGPAVSTIHITPEDGFSYASFEAVGYDLQVVDLNLLVERVLACFEPKEFSIAVHADTDTADKVLARNCSVNVIGYSREEGGIEELGLGGSVFYQKFCKGTAPVCPPAPKKTLKCCW 366
BLAST of CV885035 vs. ExPASy Swiss-Prot
Match: DCAM_PEA (S-adenosylmethionine decarboxylase proenzyme OS=Pisum sativum GN=SAMDC PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.074e-60 Identity = 110/187 (58.82%), Postives = 137/187 (73.26%), Query Frame = -1 Query: 280 KRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRADCSTSPRSILKC 840 + WH+Y AS+++ S VYTLEMCMTGLDR++ASVF+K SAA MT +SGIRKIL SEICDF+F+PCGYSMNS+EG AVSTIH+TPEDGFSYASFE GYD + + L ++ RVLACF+P EFSVA+H D +LD+KGY C EK ++ LG +GS++Y F + SPRS LKC Sbjct: 159 QNWHIYCASSDSVSPEGSVYTLEMCMTGLDREKASVFFKEQTGSAAEMTVNSGIRKILRNSEICDFDFEPCGYSMNSVEGSAVSTIHITPEDGFSYASFETAGYDLKAINLNEMVMRVLACFQPTEFSVAVHVDNASKSFEQGCLLDVKGYCCEEKSHQGLGMSGSVVYQKFLKTSYCGSPRSTLKC 345
BLAST of CV885035 vs. ExPASy Swiss-Prot
Match: DCAM_SPIOL (S-adenosylmethionine decarboxylase proenzyme OS=Spinacia oleracea GN=SAMDC PE=2 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 6.033e-60 Identity = 112/194 (57.73%), Postives = 143/194 (73.71%), Query Frame = -1 Query: 274 KRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELG-NNGSLIYYSFSRAD----CSTSPRSILKCCW 840 ++WHVYSASAE S PVYTLEMCMTGL +++ASVF+K+ +AA+MTE SGIRKILP S+ICDF+F+PCGYSMN+IEG A+STIH+TPEDGFSYASFEAVGYD + L L+ERVLACF+P+EFS+A+H++I + +++ GYS E EELG S+ Y F +A + P+ LKCCW Sbjct: 159 QKWHVYSASAETISFEEPVYTLEMCMTGLKKEKASVFFKSQSPNAAVMTESSGIRKILPDSKICDFDFEPCGYSMNAIEGPAISTIHITPEDGFSYASFEAVGYDLKKTDLNQLVERVLACFEPSEFSIAIHAEIAANSMEHNCYVNVNGYSREEGGIEELGFGAASVFYQKFCKASTGFGATNKPKPALKCCW 352
BLAST of CV885035 vs. ExPASy Swiss-Prot
Match: DCAM1_DIACA (S-adenosylmethionine decarboxylase proenzyme 1 OS=Dianthus caryophyllus GN=SAMDC1 PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.474e-55 Identity = 107/188 (56.91%), Postives = 136/188 (72.34%), Query Frame = -1 Query: 277 KRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRADCSTSPRSILKCC 840 ++WHVYSA+AE S+ +PVYTLEMCMTGLD+ +ASVF+K+ +SAA+MTE SGIRKILP S ICDF+F+PCGYSMN+IEG AVSTIH+TPEDGFSYASFEAVGYD ++V + L+ERVL CF+P EFS+A+ D +++ GY E E LG GS++Y F + + KCC Sbjct: 183 QKWHVYSATAEP-SYDDPVYTLEMCMTGLDKGKASVFFKSESASAAVMTETSGIRKILPDSAICDFDFEPCGYSMNAIEGPAVSTIHITPEDGFSYASFEAVGYDLKIVDVNQLVERVLNCFQPREFSIAVSVDTADKVLEQYCAVNVAGYCREEGGVEGLGVGGSVLYQKFGKVATVSGLNKSPKCC 369
BLAST of CV885035 vs. ExPASy Swiss-Prot
Match: DCAM1_BRAJU (S-adenosylmethionine decarboxylase proenzyme 1 OS=Brassica juncea GN=SAMDC1 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.439e-53 Identity = 102/159 (64.15%), Postives = 125/159 (78.62%), Query Frame = -1 Query: 376 TKRWHVYSASAEA--GSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDT-FMLDLKGYSCGE 843 TK+WHVYSASA A + N VYTLEMCM+GLD+ +ASVF+K SSA MT++SGIRKILP+S+ICDFEF+PCGYSMNS+EGDA STIHVTPEDGFSYASFEAVGYDF + L+ L+ RVL CF+P +FSVA+HS + + + +DL+ Y C E Sbjct: 158 TKKWHVYSASAPAKNSNGDNNVYTLEMCMSGLDKDKASVFFKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGDASSTIHVTPEDGFSYASFEAVGYDFTTMDLSQLVSRVLTCFEPKQFSVAVHSSVAQKSYDHSGLSVDLEDYGCRE 316 The following BLAST results are available for this feature:
BLAST of CV885035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885035 ID=CV885035; Name=CV885035; organism=Citrus sinensis; type=EST; length=846bpback to top |