CV885035
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885035 vs. ExPASy Swiss-Prot
Match: DCAM2_MUSSP (S-adenosylmethionine decarboxylase proenzyme 2 OS=Mus spretus GN=Amd2 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.526e-15 Identity = 49/135 (36.30%), Postives = 72/135 (53.33%), Query Frame = -1 Query: 448 NTKRWHVYSASAEAGSHVN-PVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVAL 846 N+ W++Y+ ++ P TLE+ M+ LD FY + +A +T +SGIR ++P S I F+PCGYSMN ++ D TIH+TPE FSY SFE + L+ +V+ FKP +F L Sbjct: 153 NSDCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTL 284
BLAST of CV885035 vs. ExPASy Swiss-Prot
Match: DCAM2_MOUSE (S-adenosylmethionine decarboxylase proenzyme 2 OS=Mus musculus GN=Amd2 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.526e-15 Identity = 49/135 (36.30%), Postives = 72/135 (53.33%), Query Frame = -1 Query: 448 NTKRWHVYSASAEAGSHVN-PVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVAL 846 N+ W++Y+ ++ P TLE+ M+ LD FY + +A +T +SGIR ++P S I F+PCGYSMN ++ D TIH+TPE FSY SFE + L+ +V+ FKP +F L Sbjct: 153 NSDCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTL 284
BLAST of CV885035 vs. ExPASy Swiss-Prot
Match: DCAM1_MOUSE (S-adenosylmethionine decarboxylase proenzyme 1 OS=Mus musculus GN=Amd1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.526e-15 Identity = 49/135 (36.30%), Postives = 72/135 (53.33%), Query Frame = -1 Query: 448 NTKRWHVYSASAEAGSHVN-PVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVAL 846 N+ W++Y+ ++ P TLE+ M+ LD FY + +A +T +SGIR ++P S I F+PCGYSMN ++ D TIH+TPE FSY SFE + L+ +V+ FKP +F L Sbjct: 153 NSDCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTL 284
BLAST of CV885035 vs. ExPASy Swiss-Prot
Match: DCAM_CAEEL (S-adenosylmethionine decarboxylase proenzyme OS=Caenorhabditis elegans GN=smd-1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.721e-15 Identity = 51/146 (34.93%), Postives = 81/146 (55.48%), Query Frame = -1 Query: 415 RWHVYS--ASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPK-SEICDFEFDPCGYSMNSI--EGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGD 837 RW++Y+ E +H P +TLE+ M+ LD + F K +GI KI+P +++ D FDPCGYSMN+ + D +TIHVTPE FS+ASFE + ++V L +VL CF+P + + + ++ + ++ D Sbjct: 171 RWYLYTFHREVEFPAHKQPDHTLEILMSDLDEEVLHKFTKDYAVDGNDCFMRAGIDKIIPAGADVHDELFDPCGYSMNAYMNDTDQYATIHVTPEKAFSFASFET---NQDLVCLYSQTRKVLQCFRPNKILMTVFANDISEKGKD 313
BLAST of CV885035 vs. ExPASy Swiss-Prot
Match: DCAM_XENLA (S-adenosylmethionine decarboxylase proenzyme OS=Xenopus laevis GN=amd1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.244e-13 Identity = 48/135 (35.56%), Postives = 70/135 (51.85%), Query Frame = -1 Query: 448 NTKRWHVYSASAEAGSHVN-PVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVAL 846 N+ W++Y+ ++ P TLE+ M+ LD + FY +A +T SGIR ++ S I F PCGYSMN ++ D TIH+TPE FSY SFE + + L+ +V+ FKP +F L Sbjct: 155 NSDCWYLYTLDIPDEYVISQPDQTLEILMSELDPEVMDQFYMKEGVTANDVTRVSGIRDLITGSVIDATMFSPCGYSMNGMKSDGTYWTIHITPEPDFSYVSFET---NVSLTTYDDLISKVVDVFKPRKFVTTL 286
BLAST of CV885035 vs. ExPASy Swiss-Prot
Match: DCAM_ONCVO (S-adenosylmethionine decarboxylase proenzyme OS=Onchocerca volvulus GN=smd-1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12 Identity = 57/179 (31.84%), Postives = 79/179 (44.13%), Query Frame = -1 Query: 319 RWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFE-FDPCGYSMNSI--EGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDE--HGDTFMLDLKGYSCGEKIYEELG-NNGSLIYYSFSR 837 RW +Y+ P +TLE+ M GL S F S I ILP + E F PCGYS+N + D TIHVTPE FSY SFE + + L + +VL FKP++F + + ++ + +E + DLK C + L +LIY F R Sbjct: 175 RWFLYTMVTPQAVFPFPEHTLEILMNGLPEDVLSTFSPNVSKDGKDCRMKSAINTILPPDIVVHEELFSPCGYSLNGLIPHSDHYITIHVTPEPDFSYVSFET---NQHTLNLCEQMLKVLEIFKPSKFLLTIFTNELSNEGKKMQKNLWDLKICGCRRTNLQFLELPTETLIYVQFER 350
BLAST of CV885035 vs. ExPASy Swiss-Prot
Match: DCAM_TRYCR (S-adenosylmethionine decarboxylase proenzyme OS=Trypanosoma cruzi PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.325e-11 Identity = 43/120 (35.83%), Postives = 60/120 (50.00%), Query Frame = -1 Query: 439 LEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICD-------FEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSD 777 L M M GLDR + ++ S TE + IRK ++ D +F+PCGYS+N+I G TIH+TPED S+AS+E + V + + VL F P FSV + D Sbjct: 193 LSMTMYGLDRTQTKHWFSDRFISTG--TETAAIRKATKLDKVADDSWKLHDLQFEPCGYSINTIRGAEYQTIHITPEDHCSFASYET---NTPAVNYSERINTVLGVFAPIRFSVIVFID 307 The following BLAST results are available for this feature:
BLAST of CV885035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885035 ID=CV885035; Name=CV885035; organism=Citrus sinensis; type=EST; length=846bpback to top |