CV885027

Overview
NameCV885027
Unique NameCV885027
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_BURPP (Chaperone protein dnaJ OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.383e-11
Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            YY +LG+ K+AS  +I+ AY KLAMK HPDR   NPG   +A+  F++++EAY +LSD  KR+ YD
Sbjct:    6 YYEVLGVAKNASDDEIKKAYRKLAMKHHPDR---NPG-NKDAEGHFKEVKEAYEMLSDSQKRAAYD 67          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_ACICJ (Chaperone protein dnaJ OS=Acidiphilium cryptum (strain JF-5) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.383e-11
Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            YY +LG+ + AS  +++ AY KLAM++HPDR   NPG A  A+ +F+ I EAY VL DE KR+ YD
Sbjct:    6 YYELLGVSRGASADELKKAYRKLAMQYHPDR---NPGDAA-AEQKFKDINEAYDVLKDEQKRAAYD 67          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNJC7_DICDI (DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.337e-11
Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNP-GVAGEAKCRFQQIQEAYSVLSDENKRSMYDAG 394
            YY ILG+ K+A  ++I+ AY KLA+++HPD++ + P     +A+  F+ I EAYSVLSDE K+  YD G
Sbjct:  362 YYKILGVSKEAGETEIKKAYRKLALQYHPDKNNQLPEEEKAQAEKMFKDIGEAYSVLSDEKKKRQYDMG 430          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNJB9_MOUSE (DnaJ homolog subfamily B member 9 OS=Mus musculus GN=Dnajb9 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.337e-11
Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            YY ILG+ K AS   I+ A+HKLAMK+HPD++ K+P    +A+ +F++I EAY  LSD N R  YD
Sbjct:   27 YYDILGVPKSASERQIKKAFHKLAMKYHPDKN-KSP----DAEAKFREIAEAYETLSDANSRKEYD 87          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_XANCP (Chaperone protein dnaJ OS=Xanthomonas campestris pv. campestris GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.337e-11
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDA 391
            YY +LG+ + AS  +++ AY + AMK+HPDR   NPG A  A+  F++ +EAY VLSD NKR  YDA
Sbjct:    6 YYEVLGVARGASDEELKKAYRRCAMKYHPDR---NPGDAA-AEATFKECKEAYEVLSDGNKRRAYDA 68          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_XANCB (Chaperone protein dnaJ OS=Xanthomonas campestris pv. campestris (strain B100) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.337e-11
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDA 391
            YY +LG+ + AS  +++ AY + AMK+HPDR   NPG A  A+  F++ +EAY VLSD NKR  YDA
Sbjct:    6 YYEVLGVARGASDEELKKAYRRCAMKYHPDR---NPGDAA-AEATFKECKEAYEVLSDGNKRRAYDA 68          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_XANC8 (Chaperone protein dnaJ OS=Xanthomonas campestris pv. campestris (strain 8004) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.337e-11
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDA 391
            YY +LG+ + AS  +++ AY + AMK+HPDR   NPG A  A+  F++ +EAY VLSD NKR  YDA
Sbjct:    6 YYEVLGVARGASDEELKKAYRRCAMKYHPDR---NPGDAA-AEATFKECKEAYEVLSDGNKRRAYDA 68          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_THEVO (Chaperone protein dnaJ OS=Thermoplasma volcanium GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.337e-11
Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            YY ILG+ ++AS  DI+ A+ +LA KWHPD    +P    EA+ +F++I EAY VLSD  KR +YD
Sbjct:    5 YYKILGVDRNASEEDIKKAFRELAKKWHPD---LHPDNKAEAEEKFKEISEAYEVLSDPEKRRIYD 67          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_STACT (Chaperone protein dnaJ OS=Staphylococcus carnosus (strain TM300) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.337e-11
Identity = 52/164 (31.71%), Postives = 80/164 (48.78%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLE--------EEDEDFYGF---VQEMVSMM--------NNVKDEGDSFEDLQRMFVEMVDGMSFDFNYDPTDAQRACVNTSKGKAAKRGTSR 625
            YY +LG+ KDAS  +I+ AY KL+ K+HPD + +       A+ +F++I EAY VLSDENKR+ YD   +D  +           +DF GF    +++ S           NV  +GD   DLQ       +  +F    + +  ++    T  G  AK G+ +
Sbjct:    6 YYEVLGVSKDASKDEIKKAYRKLSKKYHPDINQEE-----GAEEKFKEISEAYEVLSDENKRANYDQFGHDGPQGGFGGQGFGGGQDFGGFGGGFEDIFSSFFGGGAQRDPNVPRKGD---DLQYTMTVTFEEAAFGTEKEISIRKQVKCETCDGSGAKPGSKK 161          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_SODGM (Chaperone protein dnaJ OS=Sodalis glossinidius (strain morsitans) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.337e-11
Identity = 32/66 (48.48%), Postives = 46/66 (69.70%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            YY ILG+ +DA   +I+ AY + AMK+HPDR+  N     EA+ +F++I+EAY VL+D  KR+ YD
Sbjct:    6 YYEILGVSRDAEEREIKKAYKRQAMKFHPDRNRGN----AEAEAKFKEIKEAYEVLTDAQKRAAYD 67          
The following BLAST results are available for this feature:
BLAST of CV885027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
DNAJ_BURPP6.383e-1151.52Chaperone protein dnaJ OS=Burkholderia phytofirman... [more]
DNAJ_ACICJ6.383e-1151.52Chaperone protein dnaJ OS=Acidiphilium cryptum (st... [more]
DNJC7_DICDI8.337e-1147.83DnaJ homolog subfamily C member 7 homolog OS=Dicty... [more]
DNJB9_MOUSE8.337e-1151.52DnaJ homolog subfamily B member 9 OS=Mus musculus ... [more]
DNAJ_XANCP8.337e-1150.75Chaperone protein dnaJ OS=Xanthomonas campestris p... [more]
DNAJ_XANCB8.337e-1150.75Chaperone protein dnaJ OS=Xanthomonas campestris p... [more]
DNAJ_XANC88.337e-1150.75Chaperone protein dnaJ OS=Xanthomonas campestris p... [more]
DNAJ_THEVO8.337e-1150.00Chaperone protein dnaJ OS=Thermoplasma volcanium G... [more]
DNAJ_STACT8.337e-1131.71Chaperone protein dnaJ OS=Staphylococcus carnosus ... [more]
DNAJ_SODGM8.337e-1148.48Chaperone protein dnaJ OS=Sodalis glossinidius (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012B02_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885027 ID=CV885027; Name=CV885027; organism=Citrus sinensis; type=EST; length=814bp
CCAAAAGGAGAACCAATATTCCTTTATTTTTCTCTGCTTTATCAATCCTC
TAAATGCTCTCTTCATAACAGTTTGTTTCCGTTTCTTCATATGATTTTAT
CTTGACAAGCATATTACATCCTTATTGCTGTTTTCTTTTTTGGTTGCTGT
GATGGATGGAGGAGGAGGATCCAACGGCGGATCTTTGAGCTACTACGCGA
TTCTTGGGATTCGCAAGGACGCCTCCTTCTCTGACATTCGCTCCGCTTAT
CACAAGCTCGCCATGAAATGGCATCCGGATAGGAGTGCGAAGAACCCGGG
AGTGGCCGGGGAAGCCAAATGCCGGTTTCAGCAAATTCAAGAAGCTTACT
CCGTCCTCTCTGATGAGAACAAGAGGTCAATGTACGATGCTGGACTCTAT
GATCCCCTTGAGGAAGAAGATGAGGACTTCTATGGTTTTGTGCAAGAGAT
GGTCTCCATGATGAATAATGTTAAAGACGAGGGGGACAGTTTTGAGGACC
TCCAAAGGATGTTCGTGGAAATGGTGGATGGGATGAGCTTCGACTTTAAT
TATGATCCTACGGACGCGCAAAGAGCATGTGTCAACACATCAAAGGGTAA
AGCGGCCAAGCGCGGTACTTCTCGTTGCTGACAATCGCTCTGGATCATCT
CTGATCATTCAAGCTAATGATGATGTTGTTGATCAATTCCCCCCATTTTG
TTCTAATCTTCAAATTAATCCCTTATGTTGGGGGTGGGTAGTTTAAGAAT
TTTTTTTTTTTTTTAAATCTCGGGGGTGTTAGCATTTGGACCGTGATATT
TCCTTTATAAACCT
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