CV885027

Overview
NameCV885027
Unique NameCV885027
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_CHRVO (Chaperone protein dnaJ OS=Chromobacterium violaceum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.592e-12
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            YY +LG+ +DAS  DI+ AY KLAMK+HPDR   NP  + EA+ +F++++EAY +LSD  KR  YD
Sbjct:    6 YYDVLGVNRDASDDDIKKAYRKLAMKYHPDR---NPD-SKEAEDKFKEVKEAYEILSDSQKRGAYD 67          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLPN (Chaperone protein dnaJ OS=Chlamydia pneumoniae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.592e-12
Identity = 38/66 (57.58%), Postives = 46/66 (69.70%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            YY+ILGI K AS  +I+ AY KLA+K+HPD   KNPG A   K RF+++ EAY VLSD  KR  YD
Sbjct:    3 YYSILGISKTASAEEIKKAYRKLAVKYHPD---KNPGDAAAEK-RFKEVSEAYEVLSDPQKRDSYD 64          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_METFK (Chaperone protein dnaJ OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.385e-12
Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            YY +LG+ +DA+  +I+ AY KLAMK+HPDR+  NP    +A+  F++ +EAY VLSD+ KR+ YD
Sbjct:    6 YYEVLGVNRDATDEEIKKAYRKLAMKYHPDRNPDNP----KAEEHFKEAKEAYEVLSDDQKRAAYD 67          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATU (Chaperone protein dnaJ OS=Francisella tularensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.421e-12
Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            YY IL I K AS  +I+ AY KLAMK+HPDR   NPG   EA+ +F++I EAY +LSD++KRS YD
Sbjct:    6 YYEILNISKTASGVEIKRAYRKLAMKYHPDR---NPG-DKEAEIKFKEISEAYEILSDDSKRSRYD 67          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATH (Chaperone protein dnaJ OS=Francisella tularensis subsp. holarctica (strain LVS) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.421e-12
Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            YY IL I K AS  +I+ AY KLAMK+HPDR   NPG   EA+ +F++I EAY +LSD++KRS YD
Sbjct:    6 YYEILNISKTASGVEIKRAYRKLAMKYHPDR---NPG-DKEAEIKFKEISEAYEILSDDSKRSRYD 67          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOD6 (Chaperone protein dnaJ OS=Clostridium difficile (strain 630) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.421e-12
Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPL 409
            YY +LGI K A   +I+ AY KLAMK+HPDR   NPG   EA+ +F++I EAY VLSD+ KR  YD   +D L
Sbjct:    7 YYEVLGISKGAEAQEIKKAYRKLAMKYHPDR---NPG-DKEAEEKFKEINEAYEVLSDDTKRKTYDQFGHDGL 75          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNJB3_HUMAN (DnaJ homolog subfamily B member 3 OS=Homo sapiens GN=DNAJB3 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.774e-12
Identity = 35/66 (53.03%), Postives = 44/66 (66.67%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            YY +L + + AS   I+ AY KLA+KWHPD   KNP    EA+ RF+Q+ EAY VLSD  KR +YD
Sbjct:    4 YYEVLDVPRQASSEAIKKAYRKLALKWHPD---KNPENKEEAERRFKQVAEAYEVLSDAKKRDIYD 66          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLFF (Chaperone protein dnaJ OS=Chlamydophila felis (strain Fe/C-56) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.774e-12
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            YY +LG+ K AS  +I+ AY KLA+K+HPD   KNPG A EA+ RF+++ EAY VLSD  KR  YD
Sbjct:    3 YYDVLGVSKTASPEEIKKAYRKLAVKYHPD---KNPGDA-EAEKRFKEVSEAYEVLSDAQKRESYD 64          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ6_ARATH (Chaperone protein dnaJ 6 OS=Arabidopsis thaliana GN=ATJ6 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.774e-12
Identity = 46/146 (31.51%), Postives = 74/146 (50.68%), Query Frame = 2
Query:  194 YAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFVQEMVSMMNNVKDEGDSFEDLQRMFVEM------VDGMSFDFNYDPTDAQR----ACVNTSKGK 601
            Y +LG+ + A+  +IR AYHKLA+K HPD++  +     EAK +FQQ+Q+  S+L DE KR++YD                        +++    GD+FE+L+  F +M       D   F+ NY  +++++       N  KGK
Sbjct:   31 YEVLGVERRATSQEIRKAYHKLALKLHPDKNQDDK----EAKDKFQQLQKVISILGDEEKRAVYD--------------------QTGSIDDADIPGDAFENLRDFFRDMYKKVNEADIEEFEANYRGSESEKKDLLELFNKFKGK 152          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_NITEU (Chaperone protein dnaJ OS=Nitrosomonas europaea GN=dnaJ PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.540e-12
Identity = 33/66 (50.00%), Postives = 49/66 (74.24%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            YY +LG+ +DA  ++++ AY KLAMK+HPDR+A +     +A+ RF+ I+EAY +LSD NKR+ YD
Sbjct:    6 YYEVLGVGRDADENELKKAYRKLAMKYHPDRNAGDT----KAEERFKNIKEAYEILSDPNKRAAYD 67          
The following BLAST results are available for this feature:
BLAST of CV885027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
DNAJ_CHRVO2.592e-1253.03Chaperone protein dnaJ OS=Chromobacterium violaceu... [more]
DNAJ_CHLPN2.592e-1257.58Chaperone protein dnaJ OS=Chlamydia pneumoniae GN=... [more]
DNAJ_METFK3.385e-1250.00Chaperone protein dnaJ OS=Methylobacillus flagella... [more]
DNAJ_FRATU4.421e-1257.58Chaperone protein dnaJ OS=Francisella tularensis G... [more]
DNAJ_FRATH4.421e-1257.58Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_CLOD64.421e-1253.42Chaperone protein dnaJ OS=Clostridium difficile (s... [more]
DNJB3_HUMAN5.774e-1253.03DnaJ homolog subfamily B member 3 OS=Homo sapiens ... [more]
DNAJ_CHLFF5.774e-1256.06Chaperone protein dnaJ OS=Chlamydophila felis (str... [more]
DNAJ6_ARATH5.774e-1231.51Chaperone protein dnaJ 6 OS=Arabidopsis thaliana G... [more]
DNAJ_NITEU7.540e-1250.00Chaperone protein dnaJ OS=Nitrosomonas europaea GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_012B02_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885027 ID=CV885027; Name=CV885027; organism=Citrus sinensis; type=EST; length=814bp
CCAAAAGGAGAACCAATATTCCTTTATTTTTCTCTGCTTTATCAATCCTC
TAAATGCTCTCTTCATAACAGTTTGTTTCCGTTTCTTCATATGATTTTAT
CTTGACAAGCATATTACATCCTTATTGCTGTTTTCTTTTTTGGTTGCTGT
GATGGATGGAGGAGGAGGATCCAACGGCGGATCTTTGAGCTACTACGCGA
TTCTTGGGATTCGCAAGGACGCCTCCTTCTCTGACATTCGCTCCGCTTAT
CACAAGCTCGCCATGAAATGGCATCCGGATAGGAGTGCGAAGAACCCGGG
AGTGGCCGGGGAAGCCAAATGCCGGTTTCAGCAAATTCAAGAAGCTTACT
CCGTCCTCTCTGATGAGAACAAGAGGTCAATGTACGATGCTGGACTCTAT
GATCCCCTTGAGGAAGAAGATGAGGACTTCTATGGTTTTGTGCAAGAGAT
GGTCTCCATGATGAATAATGTTAAAGACGAGGGGGACAGTTTTGAGGACC
TCCAAAGGATGTTCGTGGAAATGGTGGATGGGATGAGCTTCGACTTTAAT
TATGATCCTACGGACGCGCAAAGAGCATGTGTCAACACATCAAAGGGTAA
AGCGGCCAAGCGCGGTACTTCTCGTTGCTGACAATCGCTCTGGATCATCT
CTGATCATTCAAGCTAATGATGATGTTGTTGATCAATTCCCCCCATTTTG
TTCTAATCTTCAAATTAATCCCTTATGTTGGGGGTGGGTAGTTTAAGAAT
TTTTTTTTTTTTTTAAATCTCGGGGGTGTTAGCATTTGGACCGTGATATT
TCCTTTATAAACCT
back to top