CV885027

Overview
NameCV885027
Unique NameCV885027
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_XANP2 (Chaperone protein dnaJ OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.742e-11
Identity = 37/97 (38.14%), Postives = 53/97 (54.64%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFVQEMVSMMNNVKDE 481
            YY  LG  + A  + ++++Y KLAMKWHPDRS  N    GEA+  F+++ EAY VL D  KR+ YD   +   E       GF  +  S   ++ D+
Sbjct:    6 YYETLGCDRGADDTVLKASYRKLAMKWHPDRSQGN----GEAEVMFKEVNEAYEVLKDPQKRAAYDRFGHAAFENGGGGGPGFGNDFASSFADIFDD 98          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIG1 (Chaperone protein dnaJ OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.742e-11
Identity = 32/66 (48.48%), Postives = 48/66 (72.73%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            +YA LG+ + A+  +I+ AY KLAMK+HPDR+  N     EA+ +F+++Q+AY  LSD+ KR+MYD
Sbjct:    6 FYATLGVARAATDDEIKKAYRKLAMKYHPDRNPDNK----EAEEKFKEVQKAYETLSDKEKRAMYD 67          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNJB9_RAT (DnaJ homolog subfamily B member 9 OS=Rattus norvegicus GN=Dnajb9 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.888e-11
Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            YY ILG+ K AS   I+ A+HKLAMK+HPD++ K+P    +A+ +F++I EAY  LSD N+R  YD
Sbjct:   27 YYDILGVPKSASERQIKKAFHKLAMKYHPDKN-KSP----DAEAKFREIAEAYETLSDANRRKEYD 87          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNJB9_PONAB (DnaJ homolog subfamily B member 9 OS=Pongo abelii GN=DNAJB9 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.888e-11
Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            YY ILG+ K AS   I+ A+HKLAMK+HPD++ K+P    +A+ +F++I EAY  LSD N+R  YD
Sbjct:   27 YYDILGVPKSASERQIKKAFHKLAMKYHPDKN-KSP----DAEAKFREIAEAYETLSDANRRKEYD 87          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNJB9_HUMAN (DnaJ homolog subfamily B member 9 OS=Homo sapiens GN=DNAJB9 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.888e-11
Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            YY ILG+ K AS   I+ A+HKLAMK+HPD++ K+P    +A+ +F++I EAY  LSD N+R  YD
Sbjct:   27 YYDILGVPKSASERQIKKAFHKLAMKYHPDKN-KSP----DAEAKFREIAEAYETLSDANRRKEYD 87          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_SHEAM (Chaperone protein dnaJ OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.888e-11
Identity = 32/66 (48.48%), Postives = 49/66 (74.24%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            YY +LG+ +DAS  +I+ AY +LAMK+HPDR   NPG   EA+  F++++EAY +L+D +K++ YD
Sbjct:    6 YYEVLGVGRDASEREIKKAYKRLAMKYHPDR---NPG-DKEAEASFKEVKEAYEILTDTDKKAAYD 67          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_SALRD (Chaperone protein dnaJ OS=Salinibacter ruber (strain DSM 13855) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.888e-11
Identity = 40/104 (38.46%), Postives = 61/104 (58.65%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFVQEMVSMMNNVKDEGDSFEDL 502
            YY ILG+ +DAS  +I+ AY K AM++HPDR+  +P    EA+ +F++  EAY VLSD  KR  YD   +D +   D    G  +      ++++D  D+F D+
Sbjct:    5 YYDILGVDEDASDKEIKKAYRKKAMEYHPDRNPDDP----EAEQKFKEASEAYEVLSDPEKRQRYDQFGHDGV---DSGAGGGRRGRGRGFHDIEDIFDAFSDI 101          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_HALHL (Chaperone protein dnaJ OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.888e-11
Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            YY +LG+ K+AS ++I+ AY ++A K+HPDR   NPG    A+ RF++++EAY VLSD  KR+ YD
Sbjct:    6 YYEVLGVNKNASDAEIKKAYRRMAQKFHPDR---NPGDEESAE-RFKEVKEAYEVLSDAQKRAAYD 67          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOTE (Chaperone protein dnaJ OS=Clostridium tetani GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.888e-11
Identity = 32/66 (48.48%), Postives = 48/66 (72.73%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            +Y +LG+ K A+ ++I+ A+ KLA+K+HPD++A N     EA+ RF++I EAY VLSD  KR+ YD
Sbjct:    6 FYEVLGVEKGANDAEIKKAFRKLALKYHPDKNAGNK----EAEERFKEINEAYQVLSDPQKRAQYD 67          
BLAST of CV885027 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPD (Chaperone protein dnaJ OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.888e-11
Identity = 32/66 (48.48%), Postives = 47/66 (71.21%), Query Frame = 2
Query:  191 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 388
            YY +LG+ K+A+  +++ AY KLAMK HPDR+  N     +A+ +F++I+EAY VL DE KR+ YD
Sbjct:    6 YYEVLGVAKNATDDELKKAYRKLAMKHHPDRNPDNK----DAEEKFKEIKEAYEVLGDEQKRAAYD 67          
The following BLAST results are available for this feature:
BLAST of CV885027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
DNAJ_XANP23.742e-1138.14Chaperone protein dnaJ OS=Xanthobacter autotrophic... [more]
DNAJ_NEIG13.742e-1148.48Chaperone protein dnaJ OS=Neisseria gonorrhoeae (s... [more]
DNJB9_RAT4.888e-1151.52DnaJ homolog subfamily B member 9 OS=Rattus norveg... [more]
DNJB9_PONAB4.888e-1151.52DnaJ homolog subfamily B member 9 OS=Pongo abelii ... [more]
DNJB9_HUMAN4.888e-1151.52DnaJ homolog subfamily B member 9 OS=Homo sapiens ... [more]
DNAJ_SHEAM4.888e-1148.48Chaperone protein dnaJ OS=Shewanella amazonensis (... [more]
DNAJ_SALRD4.888e-1138.46Chaperone protein dnaJ OS=Salinibacter ruber (stra... [more]
DNAJ_HALHL4.888e-1150.00Chaperone protein dnaJ OS=Halorhodospira halophila... [more]
DNAJ_CLOTE4.888e-1148.48Chaperone protein dnaJ OS=Clostridium tetani GN=dn... [more]
DNAJ_BORPD4.888e-1148.48Chaperone protein dnaJ OS=Bordetella petrii (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012B02_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885027 ID=CV885027; Name=CV885027; organism=Citrus sinensis; type=EST; length=814bp
CCAAAAGGAGAACCAATATTCCTTTATTTTTCTCTGCTTTATCAATCCTC
TAAATGCTCTCTTCATAACAGTTTGTTTCCGTTTCTTCATATGATTTTAT
CTTGACAAGCATATTACATCCTTATTGCTGTTTTCTTTTTTGGTTGCTGT
GATGGATGGAGGAGGAGGATCCAACGGCGGATCTTTGAGCTACTACGCGA
TTCTTGGGATTCGCAAGGACGCCTCCTTCTCTGACATTCGCTCCGCTTAT
CACAAGCTCGCCATGAAATGGCATCCGGATAGGAGTGCGAAGAACCCGGG
AGTGGCCGGGGAAGCCAAATGCCGGTTTCAGCAAATTCAAGAAGCTTACT
CCGTCCTCTCTGATGAGAACAAGAGGTCAATGTACGATGCTGGACTCTAT
GATCCCCTTGAGGAAGAAGATGAGGACTTCTATGGTTTTGTGCAAGAGAT
GGTCTCCATGATGAATAATGTTAAAGACGAGGGGGACAGTTTTGAGGACC
TCCAAAGGATGTTCGTGGAAATGGTGGATGGGATGAGCTTCGACTTTAAT
TATGATCCTACGGACGCGCAAAGAGCATGTGTCAACACATCAAAGGGTAA
AGCGGCCAAGCGCGGTACTTCTCGTTGCTGACAATCGCTCTGGATCATCT
CTGATCATTCAAGCTAATGATGATGTTGTTGATCAATTCCCCCCATTTTG
TTCTAATCTTCAAATTAATCCCTTATGTTGGGGGTGGGTAGTTTAAGAAT
TTTTTTTTTTTTTTAAATCTCGGGGGTGTTAGCATTTGGACCGTGATATT
TCCTTTATAAACCT
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