CV885026

Overview
NameCV885026
Unique NameCV885026
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPA (Chaperone protein dnaJ OS=Bordetella parapertussis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.286e-11
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = -2
Query:  424 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 621
            YY +LG+ K+AS  D++ AY KLAMK+HPDR   NP  + EA+ +F++ +EAY VL DE KR+ YD
Sbjct:    6 YYEVLGVAKNASDEDLKKAYRKLAMKYHPDR---NPD-SKEAEEKFKEAKEAYEVLGDEQKRAAYD 67          
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: DNAJ_BORBR (Chaperone protein dnaJ OS=Bordetella bronchiseptica GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.286e-11
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = -2
Query:  424 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 621
            YY +LG+ K+AS  D++ AY KLAMK+HPDR   NP  + EA+ +F++ +EAY VL DE KR+ YD
Sbjct:    6 YYEVLGVAKNASDEDLKKAYRKLAMKYHPDR---NPD-SKEAEEKFKEAKEAYEVLGDEQKRAAYD 67          
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: DNAJ_ALCBS (Chaperone protein dnaJ OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.286e-11
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = -2
Query:  424 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 621
            YY +LG  KDAS  D++ AY +LAMK+HPDR+  +     EA  +F++ +EAY VL+DE KR+ YD
Sbjct:    6 YYEVLGAAKDASAQDLKKAYRRLAMKYHPDRNPDDK----EALAKFKEAKEAYEVLADEQKRAAYD 67          
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: YAY1_SCHPO (Uncharacterized J domain-containing protein C4H3.01 OS=Schizosaccharomyces pombe GN=SPAC4H3.01 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.680e-11
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = -2
Query:  424 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 621
            YY +LGI  DA+  DI+ AY KLA+K+HPD++  +P  A E   +FQ+I EAY VL DE  RS YD
Sbjct:    9 YYDLLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASE---KFQKISEAYQVLGDEKLRSQYD 71          
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: DNAJ_POLSJ (Chaperone protein dnaJ OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.680e-11
Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = -2
Query:  424 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 621
            YY  LG+ K+AS  DI+ AY KLAMK HPDR+  +     E K  F++ +EAY VLSDENKR  YD
Sbjct:    6 YYDTLGVPKNASDDDIKKAYRKLAMKHHPDRNQGDKSKVSEEK--FKEAKEAYEVLSDENKRMAYD 69          
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: DNAJ_MAGSA (Chaperone protein dnaJ OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.680e-11
Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = -2
Query:  424 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 621
            YY +LG+ K AS  DI+ AY K AM++HPDR   NPG A +A+ +F++I EAY VL DE KR+ YD
Sbjct:    6 YYELLGVEKGASPDDIKKAYRKQAMQFHPDR---NPGNA-DAEQKFKEINEAYDVLKDEQKRAAYD 67          
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: DNAJ_GLUDA (Chaperone protein dnaJ OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.680e-11
Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = -2
Query:  424 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 621
            YYA+L + +DA+  +++ AY +LAM++HPDR   NPG A  A+ RF++I EAY +L DE KR+ YD
Sbjct:    7 YYAVLEVTRDANGDELKKAYRRLAMQYHPDR---NPGDA-SAEARFKEINEAYDILKDEQKRAAYD 68          
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATW (Chaperone protein dnaJ OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.680e-11
Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = -2
Query:  424 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 621
            YY IL + K AS  +I+ AY KLAM++HPDR   NPG   EA+ +F++I EAY +LSD++KRS YD
Sbjct:    6 YYEILNVSKTASGVEIKRAYRKLAMEYHPDR---NPG-DKEAEIKFKEISEAYEILSDDSKRSRYD 67          
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATT (Chaperone protein dnaJ OS=Francisella tularensis subsp. tularensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.680e-11
Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = -2
Query:  424 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 621
            YY IL + K AS  +I+ AY KLAM++HPDR   NPG   EA+ +F++I EAY +LSD++KRS YD
Sbjct:    6 YYEILNVSKTASGVEIKRAYRKLAMEYHPDR---NPG-DKEAEIKFKEISEAYEILSDDSKRSRYD 67          
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: DNAJ_FRAT1 (Chaperone protein dnaJ OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.680e-11
Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = -2
Query:  424 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 621
            YY IL + K AS  +I+ AY KLAM++HPDR   NPG   EA+ +F++I EAY +LSD++KRS YD
Sbjct:    6 YYEILNVSKTASGVEIKRAYRKLAMEYHPDR---NPG-DKEAEIKFKEISEAYEILSDDSKRSRYD 67          
The following BLAST results are available for this feature:
BLAST of CV885026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
DNAJ_BORPA1.286e-1153.03Chaperone protein dnaJ OS=Bordetella parapertussis... [more]
DNAJ_BORBR1.286e-1153.03Chaperone protein dnaJ OS=Bordetella bronchiseptic... [more]
DNAJ_ALCBS1.286e-1150.00Chaperone protein dnaJ OS=Alcanivorax borkumensis ... [more]
YAY1_SCHPO1.680e-1153.03Uncharacterized J domain-containing protein C4H3.0... [more]
DNAJ_POLSJ1.680e-1154.55Chaperone protein dnaJ OS=Polaromonas sp. (strain ... [more]
DNAJ_MAGSA1.680e-1154.55Chaperone protein dnaJ OS=Magnetospirillum magneti... [more]
DNAJ_GLUDA1.680e-1150.00Chaperone protein dnaJ OS=Gluconacetobacter diazot... [more]
DNAJ_FRATW1.680e-1154.55Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_FRATT1.680e-1154.55Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_FRAT11.680e-1154.55Chaperone protein dnaJ OS=Francisella tularensis s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012B02_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885026 ID=CV885026; Name=CV885026; organism=Citrus sinensis; type=EST; length=814bp
TTTATAAAGAAAATATCACGGTCCAAATGCTAACACCCCCGAGATTTAAA
AAAAAAAAAAAATTCTTAAACTACCCACCCCCAACATAAGGGATTAATTT
GAAGATTAGAACAAAATGGGGGGAATTGATCAACAACATCATCATTAGCT
TGAATGATCAGAGATGATCCAGAGCGATTGTCAGCAACGAGAAGTACCGC
GCTTGGCCGCTTTACCCTTTGATGTGTTGACACATGCTCTTTGCGCGTCC
GTAGGATCATAATTAAAGTCGAAGCTCATCCCATCCACCATTTCCACGAA
CATCCTTTGGAGGTCCTCAAAACTGTCCCCCTCGTCTTTAACATTATTCA
TCATGGAGACCATCTCTTGCACAAAACCATAGAAGTCCTCATCTTCTTCC
TCAAGGGGATCATAGAGTCCAGCATCGTACATTGACCTCTTGTTCTCATC
AGAGAGGACGGAGTAAGCTTCTTGAATTTGCTGAAACCGGCATTTGGCTT
CCCCGGCCACTCCCGGGTTCTTCGCACTCCTATCCGGATGCCATTTCATG
GCGAGCTTGTGATAAGCGGAGCGAATGTCAGAGAAGGAGGCGTCCTTGCG
AATCCCAAGAATCGCGTAGTAGCTCAAAGATCCGCCGTTGGATCCTCCTC
CTCCATCCATCACAGCAACCAAAAAAGAAAACAGCAATAAGGATGTAATA
TGCTTGTCAAGATAAAATCATATGAAGAAACGGAAACAAACTGTTATGAA
GAGAGCATTTAGAGGATTGATAAAGCAGAGAAAAATAAAGGAATATTTTG
GTTTCTCCTTTTTT
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