CV885026

Overview
NameCV885026
Unique NameCV885026
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: DNAJ_FRAP2 (Chaperone protein dnaJ OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.680e-11
Identity = 48/161 (29.81%), Postives = 72/161 (44.72%), Query Frame = -2
Query:  184 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD---------------AGLYDPLEEEDEDFYGFVQEMVSMMNNVKDEGDSFEDLQRMFVEMVDGMSFDFNYDPTDAQRACVNTSKGKAAKRGTSRC 621
            YY IL + K AS  +I+ AY KLAMK+HPDR+  +     EA+ +F++I EAY +LSD+ KRS YD               AG +   E+  + F+G      S  +      D    ++    E   G+  + N    ++  +C  T      K     C
Sbjct:    6 YYEILNVSKTASGVEIKRAYRKLAMKYHPDRNPDDK----EAEIKFKEISEAYEILSDDGKRSRYDQFGHAGVNQQGGAGSAGGFGGFEDIFDTFFGGGTSRGSNRSRASRGSDLEYTIEISLEEAFFGVEKEINIPRMESCDSCDGTGSKSKTKTTCHAC 162          
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTR (Chaperone protein dnaJ OS=Chlamydia trachomatis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.680e-11
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = -2
Query:  424 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 621
            YY ILG+ K A+  +I+ AY KLA+K+HPD   KNPG A EA+ RF+++ EAY VL D  KR  YD
Sbjct:    3 YYTILGVAKTATPEEIKKAYRKLAVKYHPD---KNPGDA-EAERRFKEVSEAYEVLGDAQKRESYD 64          
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTB (Chaperone protein dnaJ OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.680e-11
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = -2
Query:  424 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 621
            YY ILG+ K A+  +I+ AY KLA+K+HPD   KNPG A EA+ RF+++ EAY VL D  KR  YD
Sbjct:    3 YYTILGVAKTATPEEIKKAYRKLAVKYHPD---KNPGDA-EAERRFKEVSEAYEVLGDAQKRESYD 64          
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTA (Chaperone protein dnaJ OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.680e-11
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = -2
Query:  424 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 621
            YY ILG+ K A+  +I+ AY KLA+K+HPD   KNPG A EA+ RF+++ EAY VL D  KR  YD
Sbjct:    3 YYTILGVAKTATPEEIKKAYRKLAVKYHPD---KNPGDA-EAERRFKEVSEAYEVLGDAQKRESYD 64          
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLT2 (Chaperone protein dnaJ OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.680e-11
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = -2
Query:  424 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 621
            YY ILG+ K A+  +I+ AY KLA+K+HPD   KNPG A EA+ RF+++ EAY VL D  KR  YD
Sbjct:    3 YYTILGVAKTATPEEIKKAYRKLAVKYHPD---KNPGDA-EAERRFKEVSEAYEVLGDAQKRESYD 64          
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLMU (Chaperone protein dnaJ OS=Chlamydia muridarum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.680e-11
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = -2
Query:  424 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 621
            YY ILG+ K A+  +I+ AY KLA+K+HPD   KNPG A EA+ RF+++ EAY VL D  KR  YD
Sbjct:    3 YYTILGVAKTATPEEIKKAYRKLAVKYHPD---KNPGDA-EAERRFKEVSEAYEVLGDAQKRESYD 64          
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: TID_DROME (Protein tumorous imaginal discs, mitochondrial OS=Drosophila melanogaster GN=l(2)tid PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.194e-11
Identity = 33/66 (50.00%), Postives = 47/66 (71.21%), Query Frame = -2
Query:  424 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 621
            YYA LG+ K+A+  DI+ AY++LA K+HPD + ++P    +A  +FQ++ EAY VLSDE KR  YD
Sbjct:   66 YYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKEDP----DAGRKFQEVSEAYEVLSDEQKRREYD 127          
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: DNAJ_WOLSU (Chaperone protein dnaJ OS=Wolinella succinogenes GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.194e-11
Identity = 45/114 (39.47%), Postives = 63/114 (55.26%), Query Frame = -2
Query:  280 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYDAGLYDPLEEEDEDFYGFVQEMVSMMNNVKDEGDSFEDLQRMFVEMVDG 621
            YY IL I + AS  +I+ AY K+AMK+HPDR   N G + EA+  F+++ EAY VLSDE KR +YD   Y     E + + GF         + +   D F+DL  +F  +  G
Sbjct:    6 YYEILEIERSASGEEIKKAYRKMAMKYHPDR---NEG-SSEAEEMFKRVNEAYQVLSDEGKRQLYDR--YGKQGLESQGYSGF---------SGRGFEDVFDDLGSIFDSVFGG 104          
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: DNAJ_ALHEH (Chaperone protein dnaJ OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.194e-11
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = -2
Query:  424 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 621
            YY  LG+ ++AS S+I+ AY ++AMK+HPDR   NPG   EA+ RF++ +EAY +LSD  KR+ YD
Sbjct:    6 YYEALGVARNASDSEIKKAYRRMAMKYHPDR---NPG-DKEAEARFKEAKEAYEILSDPQKRAAYD 67          
BLAST of CV885026 vs. ExPASy Swiss-Prot
Match: DJC21_HUMAN (DnaJ homolog subfamily C member 21 OS=Homo sapiens GN=DNAJC21 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.194e-11
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = -2
Query:  424 YYAILGIRKDASFSDIRSAYHKLAMKWHPDRSAKNPGVAGEAKCRFQQIQEAYSVLSDENKRSMYD 621
            +Y  LG+R+DAS  +++ AY KLA+KWHPD++  N   A EA  +F+ IQ AY VLSD  +R+ YD
Sbjct:    4 HYEALGVRRDASEEELKKAYRKLALKWHPDKNLDN---AAEAAEQFKLIQAAYDVLSDPQERAWYD 66          
The following BLAST results are available for this feature:
BLAST of CV885026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
DNAJ_FRAP21.680e-1129.81Chaperone protein dnaJ OS=Francisella philomiragia... [more]
DNAJ_CHLTR1.680e-1154.55Chaperone protein dnaJ OS=Chlamydia trachomatis GN... [more]
DNAJ_CHLTB1.680e-1154.55Chaperone protein dnaJ OS=Chlamydia trachomatis (s... [more]
DNAJ_CHLTA1.680e-1154.55Chaperone protein dnaJ OS=Chlamydia trachomatis (s... [more]
DNAJ_CHLT21.680e-1154.55Chaperone protein dnaJ OS=Chlamydia trachomatis (s... [more]
DNAJ_CHLMU1.680e-1154.55Chaperone protein dnaJ OS=Chlamydia muridarum GN=d... [more]
TID_DROME2.194e-1150.00Protein tumorous imaginal discs, mitochondrial OS=... [more]
DNAJ_WOLSU2.194e-1139.47Chaperone protein dnaJ OS=Wolinella succinogenes G... [more]
DNAJ_ALHEH2.194e-1151.52Chaperone protein dnaJ OS=Alkalilimnicola ehrliche... [more]
DJC21_HUMAN2.194e-1150.00DnaJ homolog subfamily C member 21 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012B02_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885026 ID=CV885026; Name=CV885026; organism=Citrus sinensis; type=EST; length=814bp
TTTATAAAGAAAATATCACGGTCCAAATGCTAACACCCCCGAGATTTAAA
AAAAAAAAAAAATTCTTAAACTACCCACCCCCAACATAAGGGATTAATTT
GAAGATTAGAACAAAATGGGGGGAATTGATCAACAACATCATCATTAGCT
TGAATGATCAGAGATGATCCAGAGCGATTGTCAGCAACGAGAAGTACCGC
GCTTGGCCGCTTTACCCTTTGATGTGTTGACACATGCTCTTTGCGCGTCC
GTAGGATCATAATTAAAGTCGAAGCTCATCCCATCCACCATTTCCACGAA
CATCCTTTGGAGGTCCTCAAAACTGTCCCCCTCGTCTTTAACATTATTCA
TCATGGAGACCATCTCTTGCACAAAACCATAGAAGTCCTCATCTTCTTCC
TCAAGGGGATCATAGAGTCCAGCATCGTACATTGACCTCTTGTTCTCATC
AGAGAGGACGGAGTAAGCTTCTTGAATTTGCTGAAACCGGCATTTGGCTT
CCCCGGCCACTCCCGGGTTCTTCGCACTCCTATCCGGATGCCATTTCATG
GCGAGCTTGTGATAAGCGGAGCGAATGTCAGAGAAGGAGGCGTCCTTGCG
AATCCCAAGAATCGCGTAGTAGCTCAAAGATCCGCCGTTGGATCCTCCTC
CTCCATCCATCACAGCAACCAAAAAAGAAAACAGCAATAAGGATGTAATA
TGCTTGTCAAGATAAAATCATATGAAGAAACGGAAACAAACTGTTATGAA
GAGAGCATTTAGAGGATTGATAAAGCAGAGAAAAATAAAGGAATATTTTG
GTTTCTCCTTTTTT
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