CV884993
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884993 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.018e-12 Identity = 39/102 (38.24%), Postives = 55/102 (53.92%), Query Frame = -3 Query: 524 KKKIMIGSVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDAN-TKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTW 826 K KI VK ++ K SV CH+ +P+ ++YCH VY + N +AK VA+CH +TSAW+P H AF L PG + VCH++ E + W Sbjct: 294 KYKIAAAGVKKLSDDK---SVVCHKQKYPFAVFYCHKAMMTTVYAVPLEGENGMRAK---AVAVCHKNTSAWNPNHLAFKVLKVKPGTVPVCHFLPETHVVW 389
BLAST of CV884993 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.470e-11 Identity = 31/83 (37.35%), Postives = 48/83 (57.83%), Query Frame = -3 Query: 521 VSCHQSLFPYLLYYCH-SVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWT 766 ++CH +PY ++ CH + R Y+A ++ + A VA+CH DTS W+P H AF LG PG + VCH++ + + WT Sbjct: 502 IACHPESYPYAVFMCHLTEATTRAYKASLVGKDGTAV--EAVAVCHTDTSDWNPEHAAFHVLGVKPGTVPVCHFMQPDAVVWT 582
BLAST of CV884993 vs. ExPASy Swiss-Prot
Match: RAF1B_WHEAT (Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.507e-11 Identity = 34/94 (36.17%), Postives = 49/94 (52.13%), Query Frame = -3 Query: 524 SVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTW 805 +V+ + GG V V+CH +PY +Y CH+ R Y D+ A + A+CH DTS W+P H +F LG+ PG VCH + + W Sbjct: 263 AVQPVEGGPVF--VACHDEAYPYTVYRCHTTGPSRAYTVDMEGARGADAVTIA-AVCHTDTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIW 353
BLAST of CV884993 vs. ExPASy Swiss-Prot
Match: RAF1A_WHEAT (Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.274e-11 Identity = 34/96 (35.42%), Postives = 49/96 (51.04%), Query Frame = -3 Query: 524 IGSVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADVLDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTW 811 + SV+ + GG V V+CH +PY +Y CH+ R Y D+ A + +CH DTS W+P H +F LG+ PG VCH + + W Sbjct: 288 VRSVRPVEGGPVF--VACHDEAYPYTVYRCHTTGPSRAYMVDMEGARGGDAVTIAT-VCHTDTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIW 380 The following BLAST results are available for this feature:
BLAST of CV884993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884993 ID=CV884993; Name=CV884993; organism=Citrus sinensis; type=EST; length=888bpback to top |