CV884991
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884991 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 2.450e-33 Identity = 78/216 (36.11%), Postives = 109/216 (50.46%), Query Frame = -3 Query: 221 CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXP--LPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 859 C + FYT +F+ AA+++ GF N KREIAAFFA HET CYI +++ A+ D PG+ YYGRGP+Q++WN NY G+ +G D L +PD +A DP +SFK+A+WFWM N+V+ G+G T ING +EC AV R+ ++ +C +FG+ PG NL C Sbjct: 104 CAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM---------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285
BLAST of CV884991 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 9.309e-33 Identity = 80/236 (33.90%), Postives = 123/236 (52.12%), Query Frame = -3 Query: 221 GKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXP--LPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 919 G I+++ F ++ C + FYT D+FI AA FP F NS + +REIA FA HET +CYI +++ AS D PG+ Y+GRGPIQL+WN NY CG++L ++LL P+L++++P ++F++ +WFWM + P ++++ G+G T IN G+EC + AV RI ++ +CG+ G+ PG NL C Sbjct: 73 GSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP-------VLNQ--------------GFGATIRAIN-GMECNGGNSGAVNARIRYYRDYCGQLGVDPGPNLSC 268
BLAST of CV884991 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.620e-32 Identity = 73/215 (33.95%), Postives = 109/215 (50.70%), Query Frame = -3 Query: 221 CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS--DXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 859 C + FYT AF+ A + +PGF + G++ KREIAAFFA HET +CYI +++ +++ D +YYGRGP+Q++WN NY G A+G D L +P +A D V++FK+A+WFWM S H V+ G+G TT + +ECG + R+G++ +C + G+ PG NL C Sbjct: 89 CEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHETGH-------------FCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269
BLAST of CV884991 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 5.108e-31 Identity = 77/220 (35.00%), Postives = 107/220 (48.64%), Query Frame = -3 Query: 221 DARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ----YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 868 D+ C + FYT DAF+ A ++ FG G+E KREIAA FA HET +CYI ++ AS D P Y+GRGPIQL+WN NY G A D L P+ ++ D V+SFK+A+W+WM Q +P ++ G+G T ING +EC V+ R+ ++T +C + G+ GDNL C Sbjct: 85 DSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHETGH-------------FCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM--QHVRPVINQ-------------------GFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270
BLAST of CV884991 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.671e-31 Identity = 72/215 (33.49%), Postives = 107/215 (49.77%), Query Frame = -3 Query: 221 CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS--DXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 859 C + FYT AF+ A A+PGF + G E KREIAAFFA HET +CYI +++ +++ D +YYGRGP+Q++WN NY G +G + L +P+ +A D V++FK+A+WFWM N+V+ G+G T ING +EC + R+G++ +C + + PG NL C Sbjct: 100 CEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHETGH-------------FCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM---------------------NNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280
BLAST of CV884991 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.636e-11 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = -3 Query: 317 MTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 454 MT Q KPSCH+VI + W+P+A D AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46 The following BLAST results are available for this feature:
BLAST of CV884991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884991 ID=CV884991; Name=CV884991; organism=Citrus sinensis; type=EST; length=921bpback to top |