CV884990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884990 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 7.674e-47 Identity = 89/186 (47.85%), Postives = 116/186 (62.37%), Query Frame = 3 Query: 75 GSAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVS-PASSDXXXXXXXXXLPG--QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMT 623 G C G G G + I+SR +F+ +L +RNDA CPA+ FYTYDAF+ AA AFP F +G+ RKRE+AAF AQT HETTGGW AP G Y+WGYC+ + + SD +YYGRGPIQ+++N NY G+A+G +LL+NPDL+A+D +SFK+A WFWMT Sbjct: 54 GCQSQCSGSCGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMT 239
BLAST of CV884990 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.710e-46 Identity = 88/166 (53.01%), Postives = 115/166 (69.28%), Query Frame = 3 Query: 132 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMT 623 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HET GG G + GYC+++Q+ + +YYGRGPIQLT NY R G+ +GV +L+NNPDL+ATDP++SFK+AIWFWMT Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD--------------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMT 168
BLAST of CV884990 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.809e-46 Identity = 89/165 (53.94%), Postives = 116/165 (70.30%), Query Frame = 3 Query: 132 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTA 626 G+ ++G I++ ++F ++L RND RCPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HETTGG A G +A GYC++R+ + S +YGRGPIQLT NY G+A+G DL+NNPDL+ATD +SFK+AIWFWMTA Sbjct: 13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVREGNQMGSG-------------FYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTA 163
BLAST of CV884990 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 4.974e-46 Identity = 90/186 (48.39%), Postives = 116/186 (62.37%), Query Frame = 3 Query: 75 GSAQNCGSGVVCGERDTGHGTDGGE-LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPG--QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMT 623 G C G CG T + GG + IIS +F+ +L +RND C A+GFYTYDAF+ AA A+P F +G+ KRE+AAF AQT HETTGGW AP G Y+WGYC+ + + + +YYGRGPIQ+T+N NY G+A+G DLLNNPDL+A+D +SFK+A WFWMT Sbjct: 52 GCQSQCSGG--CGGGPTPPSSGGGSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMT 235
BLAST of CV884990 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 183.341 bits (464), Expect = 8.485e-46 Identity = 91/186 (48.92%), Postives = 115/186 (61.83%), Query Frame = 3 Query: 78 SAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNET-MRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXX---LPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMT 623 SA CG G G+ G + I+SR +F+ +L +RNDA CPA FYTYDAF+ AA AFPGF +G + KRE+AAF AQT HETTGGW AP G YAWGYC+ + A+ +YYGRGPIQL++N NY G+A+G DLL +PDL+A+D +SF +A WFWMT Sbjct: 61 SAAGCGGG----GPTPPSGSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMT 242
BLAST of CV884990 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.729e-44 Identity = 89/164 (54.27%), Postives = 113/164 (68.90%), Query Frame = 3 Query: 132 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMT 623 GT +G I++ ++F+ +L RNDARC A FYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HETTGG T +P G YA GYC++R+ + + YYGRGPIQLT NY G+A+ DL+NNPDL+ATD +SFK+AIWFWMT Sbjct: 20 GTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGNG-------------YYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMT 169
BLAST of CV884990 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 6.080e-44 Identity = 85/158 (53.80%), Postives = 108/158 (68.35%), Query Frame = 3 Query: 150 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMT 623 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FPGFG SG++T R++EIAAFF QT HETTGG A + GYC++RQ + +YYGRGPIQLT NY + G A+ DL+NNPDL+ATD +SFK+AIWFWMT Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD--------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMT 168
BLAST of CV884990 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 7.941e-44 Identity = 84/158 (53.16%), Postives = 109/158 (68.99%), Query Frame = 3 Query: 150 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMT 623 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FPGFG +G++T R++EIAAFF QT HETTGG A + GYC++RQ + +YYGRGPIQLT NY + G A+G +L+NNPDL+ATD +SFK+AIWFWMT Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD--------------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMT 168
BLAST of CV884990 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.769e-43 Identity = 87/180 (48.33%), Postives = 117/180 (65.00%), Query Frame = 3 Query: 90 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNET-MRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTA 626 C + + +G G +G +I++ +F +LP R++++CPARGFYTYDAFI AA +FP FG SG + +RE+AAFF QT HETTGG T ++ WGYC+ +++ A+S YYGRGPIQLT NY G ALG+DL+ NPDL++TD V+SFK+AIWFWMTA Sbjct: 14 CAAASLLAVAASGAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATSP------------PYYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTA 178
BLAST of CV884990 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 9.708e-42 Identity = 78/168 (46.43%), Postives = 106/168 (63.10%), Query Frame = 3 Query: 126 GHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS--DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMT 623 G+ + I+S +++ L +++DA CPARGFYTY +F+ AA FP F +G RKRE+AAF AQ HETTGGW AP G YAWG CY +++P SS D Y+GRGPIQ++WN NY G+ALG D L NP+++A ++F++A+WFWMT Sbjct: 41 GYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMT 208 The following BLAST results are available for this feature:
BLAST of CV884990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884990 ID=CV884990; Name=CV884990; organism=Citrus sinensis; type=EST; length=626bpback to top |