CV884978
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_STAAM (Probable cysteine desulfurase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=csd PE=1 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 8.275e-62 Identity = 121/259 (46.72%), Postives = 170/259 (65.64%), Query Frame = -1 Query: 208 DLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 984 +++ +K+ ++ KTK+V I HISN+L +I ++ I +H GA + VD Q+ PHM +D+Q ++ADF S HKM GPTGIG LFGK +LL M P GG+MI V +T+AD P++FEAGTP I YL IG IH YE EL Y YE + +I I IYGP +RA + +FN++++HP D+AT +D + GVA R+GHHCAQPL ++L V+++ARAS + YNTKED+D+ I+AL +T FF+ Sbjct: 156 NIEDIKQTINDKTKIVAIAHISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYSFSGHKMLGPTGIGVLFGKRELLQKMEPIEFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKD---RRAGVITFNLQDVHPHDVATAVDTE-GVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTKEDIDQLINALKQTKEFFS 410
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_STRCO (Probable cysteine desulfurase OS=Streptomyces coelicolor GN=csd PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 1.195e-60 Identity = 118/258 (45.74%), Postives = 167/258 (64.73%), Query Frame = -1 Query: 211 DLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 984 DL + E+++ KTK+V +SN+L + P+E IV + +VGA V +DA Q+ PHM +DVQ L ADF+ + HKMCGPTGIG L+G+ +LL +PPFLGGGEMI V + ST+A P +FEAGTP IDYL++IGM KI A+E L +Y + LL +P++RI GP +E +R A SF + +IHP D+ +LD+Q G+A R GHHCA+P+ G+ A+ RAS + Y+T ++D + L +FF Sbjct: 163 DLSNIDEVITEKTKVVSFVLVSNILGTQNPVEAIVRRAQEVGALVCIDASQAAPHMPLDVQALQADFVAFTGHKMCGPTGIGVLWGRQELLEDLPPFLGGGEMIETVSMHSSTYAPAPHKFEAGTPPVAQAVGLGAAIDYLNSIGMDKILAHEHALTEYAVKRLLEVPDLRIIGPTTAE--ERGAAISFTLGDIHPHDVGQVLDEQ-GIAVRVGHHCARPVCLRYGIPATTRASFYLYSTPAEIDALVDGLEHVRNFF 417
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_BACHD (Probable cysteine desulfurase OS=Bacillus halodurans GN=csd PE=3 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 2.943e-59 Identity = 118/257 (45.91%), Postives = 163/257 (63.42%), Query Frame = -1 Query: 211 LDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 981 ++ +++ +S KTK+V I H+SN+L +I P++EI +H GA +LVD QS PHM +DVQ L DF S HKM GPTGIG L+GK L M P GGEMI V L ST+ + P +FE GTP ID+L IG+ +I +E ELA+Y + L + + +YGP+ +RA L +FN+E++HP D+AT+LD G+A R+GHHCAQPL ++L V A+ARAS + YNTKED+D L +T +F Sbjct: 152 IEDVEKTISEKTKIVAIMHVSNVLGTINPVKEIAEIAHRHGAIMLVDGAQSAPHMKIDVQELGCDFFAFSGHKMAGPTGIGVLYGKKAHLEKMEPVEFGGEMIDFVGLYDSTWKELPWKFEGGTPIIAGAIGLGAAIDFLEDIGLDEIEKHEHELAQYALDRLSELEGMTVYGPQ-----KRAGLVTFNIEDVHPHDVATVLDAD-GIAVRAGHHCAQPLMKWLDVTATARASFYLYNTKEDIDALAKGLEKTKEYF 402
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_HALSA (Probable cysteine desulfurase OS=Halobacterium salinarium GN=csd PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.908e-58 Identity = 118/258 (45.74%), Postives = 160/258 (62.02%), Query Frame = -1 Query: 211 DLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 984 D+D +M++ T LV HISN L ++ P+ E+ +HD GA + VD Q+ P VDVQ +DADF S HKM GPTGIG L+GK LL+ M PFL GG+MI V + +T+ DPP +FEAGTP +DYL IGM I A+E L +Y Y+ L ++ +YGP + R A+ SFNV+ IH D++++L+ YGVA R+G HC QPLH LGV ASARAS + YNT+++VD + A++E F Sbjct: 160 DMDAAADMITDDTALVNAVHISNTLGTVNPVGELADIAHDHGAYIFVDGAQAAPTRAVDVQEIDADFYAFSGHKMLGPTGIGCLYGKRHLLAEMEPFLYGGDMIERVSYEDATWNDPPWKFEAGTPVIAQGIALAEAVDYLQDIGMDAIRAHEEALTEYAYDQLTMTDDVDVYGPPGDD---RGAVVSFNVDGIHAHDLSSILN-DYGVAIRAGDHCTQPLHDTLGVPASARASFYLYNTRDEVDALVAAVDEARQIF 413
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: SUFS_ENTS8 (Cysteine desulfurase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=sufS PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.785e-56 Identity = 111/251 (44.22%), Postives = 158/251 (62.95%), Query Frame = -1 Query: 232 LDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFL-DHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHAL 981 LDKL ++ +T+L+ + H+SN+L + PI +I+ +H G KVLVD Q+V H VDVQ LD DF + S HK+ GPTGIG L+ K ++L AMPP+ GGG MI+ V L + +T+A P RFEAGTP +DY+ IG++ IH YE L Y+ L ++P+++IYGP+ +R + +FN+ H D+ + LD YG+A R+GHHCA PL + GV A RASL YNT+++VD + L Sbjct: 154 LDKLPSLMDERTRLLAVTHVSNVLGTENPIADIIATAHQAGVKVLVDGAQAVMHHKVDVQALDCDFYLFSGHKLYGPTGIGILYAKEEILQAMPPWEGGGAMIATVSLTEGTTWAAAPWRFEAGTPNTGGIIALGAAMDYVDAIGLENIHDYERTLMAYVLRELQAVPDLQIYGPQ-----ERLGVIAFNLGKHHAYDVGSFLD-NYGIAVRTGHHCAMPLMEFYGVPAMCRASLAMYNTEDEVDRLVAGL 398
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: SUFS_DICD3 (Cysteine desulfurase OS=Dickeya dadantii (strain 3937) GN=sufS PE=1 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 5.195e-56 Identity = 111/253 (43.87%), Postives = 159/253 (62.85%), Query Frame = -1 Query: 229 DLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH-STFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALN 984 D+ +L +L +T+LV + +SN+L ++ P+ EI+ +H GAKVLVD Q+V H VDVQ LD DF S HK+ GP+GIG L+GKS+LL AMPP+ GGG MI +V L +T+ADPP RFEAG+P +DY+S +G+ I A+E L +Y +L +P +R+YGP V R + +FN+ H D+ + LD QYG+A R+GHHCA PL GV + RASL Y+ ++++D + L+ Sbjct: 158 DMAQLPALLDERTRLVAVTQVSNVLGTVNPLAEIIRQAHACGAKVLVDGAQAVMHQAVDVQALDCDFYAFSGHKLYGPSGIGVLYGKSELLQAMPPWEGGGAMIREVSLTQGTTYADPPWRFEAGSPHVAGIIGLGAALDYVSALGVDAIQAHEGLLMRYALASLAEVPTLRLYGP-----VHRQGVIAFNLGRHHAFDVGSFLD-QYGIAIRTGHHCAMPLMSRYGVPSMCRASLALYSCQDEIDRLVAGLH 404
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD2_MYCLE (Probable cysteine desulfurase 2 OS=Mycobacterium leprae GN=csd2 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 4.398e-55 Identity = 115/258 (44.57%), Postives = 151/258 (58.53%), Query Frame = -1 Query: 211 DLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 984 DLD L+ L + K+V H SN+ ++ P+ E+V + +VGA ++DACQSVPH VD+ GL DF S HKM GP GIG L+ + +LLS MPPFL GG MI V ++ +T+A P RFEAGTP YL IGM+ + A+E EL E L I +RI GPK E+ R + SF V+ +H DI +LD GVA R GHHCA PLHR + A+ARAS YNT ++VD + + + FF Sbjct: 163 DLDSLQ--LDERVKVVAFSHHSNVTGAVAPVRELVARAKEVGALTVLDACQSVPHQPVDLHGLGVDFAAFSGHKMLGPNGIGVLYARRELLSVMPPFLTGGSMIETVTMESTTYAPAPQRFEAGTPMTSQVVGLAAAARYLDAIGMKAVEAHERELVAAAVEGLSRIDGVRIIGPKSMEN--RGSPVSFVVDGVHAHDIGQVLDDD-GVAVRVGHHCALPLHRRFALAATARASFAVYNTVDEVDRLVAGVLRALDFF 415
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: SUFS_ENT38 (Cysteine desulfurase OS=Enterobacter sp. (strain 638) GN=sufS PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.280e-54 Identity = 115/251 (45.82%), Postives = 152/251 (60.56%), Query Frame = -1 Query: 232 LDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH-STFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHAL 981 L++L +L +T+LV I ISN+L + P+ EI+ +H GAKVLVD Q+V H +DVQ LD DF V S HK+ GPTGIG L+ K D+L AMPP+ GGG MI+ V L +T+A P RFEAGTP IDY+ST+G+ I YE L +Y + S+P++ +YGP R + +FN+ H D+ + LD YGVA R+GHHCA PL + V A RASL YNT E+VD + L Sbjct: 154 LEQLDALLDARTRLVAITQISNVLGTANPVAEIIAKAHQAGAKVLVDGAQAVMHHTIDVQALDCDFYVFSGHKLYGPTGIGVLYVKEDILQAMPPWEGGGSMIATVSLTQGTTYAKAPWRFEAGTPNTGGIIGLGAAIDYVSTLGLDAIAEYEASLMRYALAEMASVPDLTLYGPD-----ARKGVIAFNLGKHHAYDVGSFLD-NYGVAVRTGHHCAMPLMAFYQVPAMCRASLVMYNTTEEVDRLVTGL 398
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: SUFS_SERP5 (Cysteine desulfurase OS=Serratia proteamaculans (strain 568) GN=sufS PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 8.294e-54 Identity = 109/252 (43.25%), Postives = 154/252 (61.11%), Query Frame = -1 Query: 232 DLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLD-HSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHAL 984 DL +L ++ TKL+ + +SN+L ++ P++EI + G KVL+D Q+V H VDVQ LD DF V S HK+ GP+GIG L+G+ LL MPP+ GGG MI V L +T+A+PP RFEAG+P IDY++T+G++ I YE L Y E L +P ++IYGP +RA + +FN+ H D+ + LD QYG+A R+GHHCA PL + V + RASL YNT+++VD + L Sbjct: 153 DLARLPGLIDASTKLLALTQVSNVLGTVNPVQEITAQAKAAGLKVLIDGAQAVMHQRVDVQALDCDFYVFSGHKLYGPSGIGILYGRQALLQQMPPWEGGGSMIQQVSLTAGTTYAEPPWRFEAGSPNTAGMMGLGAAIDYVNTLGLEAIGDYEQSLMHYALEALQQVPRLKIYGP-----AERAGVIAFNLGEHHAYDVGSFLD-QYGIAIRTGHHCAMPLMAFYNVPSMCRASLALYNTRDEVDRLVAGL 398
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: SUFS_SALA4 (Cysteine desulfurase OS=Salmonella agona (strain SL483) GN=sufS PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 8.294e-54 Identity = 114/251 (45.42%), Postives = 152/251 (60.56%), Query Frame = -1 Query: 232 LDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH-STFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHAL 981 L+ L + +T+L+ I H+SN+L + P+ +++ + GAKVLVD Q+V H VDVQ LD DF V S HK+ GPTGIG L+ K LL MPP+ GGG MIS V L +T+A P RFEAGTP IDY++++G+ KI YE L +Y E L +P+I +YGP QR + +FN+ N H D+ + LD YG+A R+GHHCA PL + GV A RASL YNT E+VD + L Sbjct: 154 LETLAALFDDRTRLLAITHVSNVLGTENPLPDMIALARQHGAKVLVDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMISTVSLTQGTTWAKAPWRFEAGTPNTGGIIGLGAAIDYVTSLGLDKIGDYEQMLMRYALEQLAQVPDITLYGP-----AQRLGVIAFNLGNHHAYDVGSFLD-NYGIAVRTGHHCAMPLMAWYGVPAMCRASLAMYNTHEEVDRLVAGL 398 The following BLAST results are available for this feature:
BLAST of CV884978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884978 ID=CV884978; Name=CV884978; organism=Citrus sinensis; type=EST; length=993bpback to top |