CV884978
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_PSEAE (Probable cysteine desulfurase OS=Pseudomonas aeruginosa GN=csd PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.571e-36 Identity = 89/255 (34.90%), Postives = 138/255 (54.12%), Query Frame = -1 Query: 220 DLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 984 DL++ + ++ +T+L+ I +SN+L + P+ E++ + + GA LVD Q H D+ GL DF S HK+ GP GIG L+G+ L + + GGEM+ ++F P FEAGTP ID+L+T+ ++ A+E L L LL+ + + G +AAL SF V+ +H D+A LL +Q G+A R+GHHCA PL + L V + R SL YN +D++ F AL+ ++ Sbjct: 150 DLEQARHIIGERTRLLAISQLSNVLGTWQPVVELIQLARERGAWTLVDGAQGSVHGRHDLPGLGCDFYAFSGHKLYGPDGIGVLWGRPQALEQLAHWQFGGEMVRHTGFHEASFHAAPLGFEAGTPAVSAAIGLGATIDWLATLDEAEVAAHEGALHARLLAGLLARDGVSLLGE------PQAALASFCVDGVHVADLAHLLGEQ-GIAVRAGHHCAMPLLQRLEVPGALRVSLGLYNDADDLERFFLALDRSL 397
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_PASMU (Probable cysteine desulfurase OS=Pasteurella multocida GN=csd PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 9.533e-34 Identity = 89/257 (34.63%), Postives = 139/257 (54.09%), Query Frame = -1 Query: 208 MLSRKTKLVVIHHISNMLASILPIEEIV----HWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIY-GPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 963 +L+ T LV ++ +SN+ + P+ ++ SH A VLVDA Q++ H+ +D+Q LDADF+ S+HK+ GP G+G L GK L + P L GG+M+ V H FA+ P R EAGTP +++LS + + + LA+ L + P+ +++ P+PS ++ F I +DIATLL +Q +A R+G HCAQP LG +++ R S YN + DVD F AL+ ++ + Sbjct: 175 VLNTNTVLVALNMVSNVTGTEQPVANLIKLIRQHSH---ALVLVDAAQAISHLPIDLQRLDADFIAFSAHKLYGPNGLGVLSGKRHALEQLHPLLYGGKMVERVSAQHIRFAELPYRLEAGTPNIAGVIGFNAVLEWLSQWDLTAAEQHAIALAEQCKMRLKNYPHCQLFLSPQPS------SIVCFVFNGIATSDIATLLAEQ-NIALRAGEHCAQPYLARLGQHSTLRLSFAPYNQQADVDAFFSALDNALALLD 421
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_TREPA (Probable cysteine desulfurase OS=Treponema pallidum GN=csd PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.054e-32 Identity = 83/258 (32.17%), Postives = 127/258 (49.22%), Query Frame = -1 Query: 211 DLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 984 D+ + ++ + TK+V + N ++ P +E+ +H VGA V++D Q++ H V +V L DF V S HKM G+G L LL +MPPFL GG M+ V S F P ++E G+ I+Y ++ + A L L L +P + Y + E R + +FNV+N+H D A +L ++ GV RSG HC++P +L + + RAS YNT EDV+ AL+ F Sbjct: 148 DIQEAQKKIRACTKIVSFSAVVNATGAVNPAQELTALAHQVGAVVVIDGAQAMVHGVPNVADLGCDFFVFSGHKMFSLFGVGVLCAPHTLLESMPPFLYGGGMVDFVTEQESVFKGAPHKYEGGSANTAAVVSLCAAIEYCESLESSAVRASVHALDAALLARLEELPFLETYHARARE---RLGIIAFNVKNVHSHDTAHILGEE-GVMVRSGDHCSKPFMTHLSIQSCCRASFCIYNTMEDVEALTRALHAVGRIF 401
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_BORBU (Probable cysteine desulfurase OS=Borrelia burgdorferi GN=csd PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.832e-32 Identity = 81/259 (31.27%), Postives = 139/259 (53.67%), Query Frame = -1 Query: 220 DKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTF----ADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQP--LHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 978 ++++++++ KTKL+ I I+N L +I +E I + + VDA Q PH+ +DV+ + DFLV S HKM PTGIG L+ +++ + GG + ++F+++ +D P++FE+GTP I Y+ I M I ++ +L +Y + L + + + +++R ++ SF V+NIH DI T LD G+ATR+G C+ L + R S +FYNT+E++D FI L + + Sbjct: 164 EEIEKLITEKTKLISISGINNTLGTINDLESIGKIAKKYNICLFVDAAQMAPHIKIDVKKIGCDFLVFSGHKMLAPTGIGILYISNNMAEKLHSSKLGGNTVEEIFIENEKIKFKASDSPNKFESGTPNIAGIIGLEEAIKYIDNISMDFILEHDKQLIEYGVKKLQELDEVEFI---LNTNLKRNSIISFTVKNIHSHDIETYLDTM-GIATRAGRTCSYVAFFPENLNKDHLLRISFYFYNTQEEIDNFILGLKKVI 418
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_UREPA (Probable cysteine desulfurase OS=Ureaplasma parvum GN=csd PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.430e-29 Identity = 81/256 (31.64%), Postives = 127/256 (49.61%), Query Frame = -1 Query: 226 PDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV--DACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNE 987 P L +++S KTK+V N++ ++L I+ + VLV DA QS+ H + DV+ +DF+V S+HK+ GPTGIG + K+DL+ M P GG M + L+ D +FE GTP + +L IG KIH +E+++ KY + L IP I+ Y + ++ +F+ + D A L + + RSG CA+ ++ + + RAS + YN DVD I A+ E Sbjct: 142 PQLSDFLKVISPKTKVVSFASGGNLIGNVLDENLIIKNIKKIKPDVLVCVDATQSIQHRMFDVKKCKSDFMVFSAHKLLGPTGIGVAYIKNDLIKKMQPLKYGGGMNFSIDLNSYQLYDNYMKFEGGTPHVAGFYGFNAALKFLMDIGYNKIHEHELKITKYARDQLALIPEIKTYVQDAT-----SSTITFSYNGVFCQDFANYLGSK-NIIVRSGLSCAKIINNVIQTECAIRASFYIYNDFNDVDRLIKAIKE 391
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: Y1343_HAEIN (Putative csd-like protein HI1343 OS=Haemophilus influenzae GN=HI1343 PE=5 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.865e-21 Identity = 62/162 (38.27%), Postives = 89/162 (54.94%), Query Frame = -1 Query: 511 DLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHW----SHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAK 984 D + L LS KTKLV ++ +SN+ + PI+ ++ SH A VLVDA Q++ H+ +D+Q LDADFL S+HK+ GP G+G L GK LS + P GG+M+ V + TFA+ P R EAGTP +D+L + + LA+ Sbjct: 72 DENVLISTLSEKTKLVALNFVSNVTGTEQPIKRLIQLIRKHSH---ALVLVDAAQAISHIKIDLQDLDADFLAFSAHKIYGPNGLGVLTGKLTALSQLQPLFFGGKMVERVSNNRITFAELPYRLEAGTPNIAGVIGFNAVLDWLQKWDFTAAEQHAISLAE 230
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_MYCGE (Probable cysteine desulfurase OS=Mycoplasma genitalium GN=csd PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.062e-20 Identity = 74/248 (29.84%), Postives = 121/248 (48.79%), Query Frame = -1 Query: 253 DKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAK--VLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHS---TFADPPSRFEAGTPXXXXXXXXXXXIDYL-STIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDV 978 D + + TKL+VI SN+ + + E+I + ++VDA Q+VPH +D+ + DFL S+HK GPTG+G F KS+L S + PF GG++ LD++ F + PS+FEAGT + ++ ++ Y +L Y+ L PNI + + H Q + +F + I+ D+AT L+ + + R G C + ++ + R SL YNTKE++ Sbjct: 152 DAFLKACTPSTKLLVITATSNLFGNSIDYEKISKHLKKISPNSFIVVDAVQAVPHHKIDITSANIDFLTFSTHKFYGPTGLGIAFIKSELQSRLKPFKLGGDIFKS--LDNNFKIIFKEGPSKFEAGTLNIMAIYALNKQLKFMQKEFNFSEMVFYSKQLKNLAYQLLSQNPNIVL-----ANHDQDVPIFAFKHKYINSADLATFLNIK-KIIVRQGSIC---VGKFKNKESFLRVSLLHYNTKEEL 388
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_MYCPN (Probable cysteine desulfurase OS=Mycoplasma pneumoniae GN=csd PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.999e-20 Identity = 73/246 (29.67%), Postives = 114/246 (46.34%), Query Frame = -1 Query: 253 DKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAK--VLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHST-FADPPSRFEAGTPXXXXXXXXXXXIDYL-STIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDV 978 D K +++ KTK+V I SN+ + + +I + V K V VDA Q+V H +D+ DFL S+HK GPTG+G + K L + P GG++ + + D++ F P +FEAGTP + + ++ AY +L + YE L S P I + + H Q + SF + D+AT L+ + R G C + RY + R SL YNT +++ Sbjct: 152 DTFKSLINPKTKVVAITATSNLFGNSIDFAQIADYLKQVNPKAFVAVDAVQTVQHKQIDIAKTQIDFLAFSTHKFYGPTGLGVAYIKKSLQPQLQPLKLGGDIFTQIDPDNTIHFKSTPLKFEAGTPNIMAIYALNKLLRFFKQKFNFAQMMAYGHQLKQQAYELLNSNPQIVL-----ANHDQDVPIFSFKHRQLATIDLATFLNIN-KIMVRQGSIC---VGRYRNKDYFVRVSLMHYNTVKEL 388 The following BLAST results are available for this feature:
BLAST of CV884978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884978 ID=CV884978; Name=CV884978; organism=Citrus sinensis; type=EST; length=993bpback to top |