CV884960
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884960 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.212e-27 Identity = 72/241 (29.88%), Postives = 111/241 (46.06%), Query Frame = 2 Query: 107 GSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGS---DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTF 820 G G G G G+ G + +++ F + + C + FYT AF+ A A+P F + G E KREIAAFFA HET +CYI +++ + D +YYGRGP+Q++WN NY G +G + L +P+ +A D V++FK+A+WFWM N+V+ G+G T ING +EC + + R+G++ + Sbjct: 61 GGGGGGGGGGGGGGSGGANVANVVTDAFFNGI-KNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHETGH-------------FCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM---------------------NNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQY 266
BLAST of CV884960 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.773e-27 Identity = 79/253 (31.23%), Postives = 118/253 (46.64%), Query Frame = 2 Query: 86 GGSAQNCGSGAVCGERDTGHGTD----GGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQ----YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTF 820 G + CG+G G + GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + +REIA FA HET +CYI +++ S P Y+GRGPIQL+WN NY CG++L ++LL P+L++++P ++F++ +WFWM N V G+G T IN G+EC G + V RI ++ + Sbjct: 42 GSTDAYCGTGCRSGPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWM---------------------NSVRPVLNQGFGATIRAIN-GMECNGGNSGAVNARIRYYRDY 254
BLAST of CV884960 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.434e-26 Identity = 75/250 (30.00%), Postives = 108/250 (43.20%), Query Frame = 2 Query: 83 QGGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQ----YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTF 820 Q G G A G G G + + E F + + + C + FYT +F+ AA+++ F N KREIAAFFA HET CYI +++ + P Q YYGRGP+Q++WN NY G+ +G D L +PD +A DP +SFK+A+WFWM N+V+ G+G T ING +EC V R+ ++ + Sbjct: 56 QSGPCWGSGGEAAAGMAGRKAGAGAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM---------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDY 271
BLAST of CV884960 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.194e-26 Identity = 77/245 (31.43%), Postives = 108/245 (44.08%), Query Frame = 2 Query: 107 GSGAVCGERDTGHGTDGGELG---KIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQ----YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTF 820 G G G G G GG G + + E F + + + C + FYT +F+ AA ++ F KREIAAFFA HET CYI +++ S P Q YYGRGP+Q++WN NY G+ +G D L +PD +A DP +SFK+A+WFWM N+V+ L G+G T ING +EC V R+ ++ + Sbjct: 64 GGGGGGGGGGGGGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM---------------------NNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDY 274
BLAST of CV884960 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.099e-24 Identity = 77/250 (30.80%), Postives = 109/250 (43.60%), Query Frame = 2 Query: 86 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGS-DXXXXXXXXXLPGQ----YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTF 820 G CG+G G T + I F + + + D C + FYT DAF+ A ++ FG G+E KREIAA FA HET +CYI ++ S D P Y+GRGPIQL+WN NY G A D L P+ ++ D V+SFK+A+W+WM Q +P ++ G+G T ING +EC + V R+ ++T + Sbjct: 41 GTGEDYCGTGCQQGPCTTASPPPSNNVNADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHETGH-------------FCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM--QHVRPVINQ-------------------GFGATIRAINGALECDGANPTTVQARVNYYTEY 256 The following BLAST results are available for this feature:
BLAST of CV884960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884960 ID=CV884960; Name=CV884960; organism=Citrus sinensis; type=EST; length=821bpback to top |