CV884945

Overview
NameCV884945
Unique NameCV884945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.165e-21
Identity = 56/128 (43.75%), Postives = 76/128 (59.38%), Query Frame = -1
Query:  533 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDAL-LAVATQCVSSSPDDRPTMHRVVQILESE 913
            LAKL +D  +HI+T +AGT GY+APEY   G  TEK DVYSFGV+ LE++SGK  T+    E  + ++ W   L       E++DP      SE    L L VA  C ++SP  RPTM +VV ++E +
Sbjct:  826 LAKLNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFRPTEDFVYLLDWAYVLQERGSLLELVDPTLASDYSEEEAMLMLNVALMCTNASPTLRPTMSQVVSLIEGK 953          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.393e-20
Identity = 52/134 (38.81%), Postives = 82/134 (61.19%), Query Frame = -1
Query:  527 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLN----IVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVM 913
            LAKL E++ +HI+T +AGTFGY+APEY   G  T+K DVYSFG++ LE++ G+    ++ IE+  N    ++ W+  L  ++   E++DP        E    ++ +A  C SS P +RP+M  VV++LE + M
Sbjct:  771 LAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGR----SNKIERSKNNTFYLIDWVEVLREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSMSEVVKMLEGKKM 900          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.393e-20
Identity = 56/141 (39.72%), Postives = 85/141 (60.28%), Query Frame = -1
Query:  500 LAKLLEDEESHIT-TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDAL--LAVATQCVSSSPDDRPTMHRVVQILESEVMTPCPSDFYD 913
            +A+L+   ++H++ + +AGT GY+ PEY QS R T K DVYS+GV++LE+LSGK+P D     +  N+VGW   L  E R  EI+DP     +S  ++ L  L +A+QC+   P  RPTM +V+ + +  V     +D  D
Sbjct: 1006 MARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPEEFGEDNNLVGWAKQLYREKRGAEILDPELVTDKSGDVELLHYLKIASQCLDDRPFKRPTMIQVMTMFKELVQVDTENDSLD 1146          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.819e-20
Identity = 53/128 (41.41%), Postives = 78/128 (60.94%), Query Frame = -1
Query:  530 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 913
            LAKL +D+++HI+T VAGT GYLAPEY   G  TEKTDVY+FGV+ LE++SG+  +D +  ++   ++ W   L  + R+ E+ID        E    ++ +A  C  +S   RP M RVV +L  +V
Sbjct:  838 LAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEDEKRYLLEWAWNLHEKGREVELIDHQLTEFNMEEGKRMIGIALLCTQTSHALRPPMSRVVAMLSGDV 965          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.819e-20
Identity = 52/131 (39.69%), Postives = 87/131 (66.41%), Query Frame = -1
Query:  530 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDA--SFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSE-SLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 913
            LAKLL+  +SH+TT V GT G++APEY+ +G+++EKTDV+ FGVL+LE+++G +  D     + KG+ I+ W+  L +E R  E++D + +G   +  L+ ++ +A  C    P+ RP M +V+++LE  V
Sbjct:  447 LAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGM-ILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVLEGLV 576          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.052e-20
Identity = 55/135 (40.74%), Postives = 80/135 (59.26%), Query Frame = -1
Query:  515 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDA--LLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCP 913
            LAKL +DE +HI+T +AGT GY+APEY   G  T+K DVYSFGV+ LE++SGK  T+    E+ + ++ W   L  +    E++DP+  G      +A  +L +A  C + SP  RP M  VV +LE ++    P
Sbjct:  816 LAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGSLLELVDPDL-GTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLEGKIKVQPP 949          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 5.293e-20
Identity = 46/130 (35.38%), Postives = 86/130 (66.15%), Query Frame = -1
Query:  533 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFI--EKGLNIVGWLNFLISEDRQREIIDPNCEGVQSES-LDALLAVATQCVSSSPDDRPTMHRVVQILESE 913
            LAKL+   +SH+TT V GT G++APEY+ +G+++EKTDV+ +GV++LE+++G++  D + +  +  + ++ W+  ++ E +   ++D   EG   E+ ++ L+ +A  C  SS  +RP M  VV++LE +
Sbjct:  423 LAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLEGD 552          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 5.293e-20
Identity = 46/130 (35.38%), Postives = 86/130 (66.15%), Query Frame = -1
Query:  533 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFI--EKGLNIVGWLNFLISEDRQREIIDPNCEGVQSES-LDALLAVATQCVSSSPDDRPTMHRVVQILESE 913
            LAKL+   +SH+TT V GT G++APEY+ +G+++EKTDV+ +GV++LE+++G++  D + +  +  + ++ W+  ++ E +   ++D   EG   E+ ++ L+ +A  C  SS  +RP M  VV++LE +
Sbjct:  442 LAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLEGD 571          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.912e-20
Identity = 49/130 (37.69%), Postives = 86/130 (66.15%), Query Frame = -1
Query:  533 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEK--GLNIVGWLNFLISEDRQREIIDPNCEGVQ-SESLDALLAVATQCVSSSPDDRPTMHRVVQILESE 913
            LAKL++   +++TT V GT G++APEY+ +G+++E+TDV+ +G+++LE+++G+R  D S +E+   + ++  +  L  E R   I+D N +G    E ++ ++ VA  C   SP+DRP M  VV++LE E
Sbjct:  438 LAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLGAIVDKNLDGEYIKEEVEMMIQVALLCTQGSPEDRPVMSEVVRMLEGE 567          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.179e-19
Identity = 54/135 (40.00%), Postives = 80/135 (59.26%), Query Frame = -1
Query:  515 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDA--LLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCP 913
            LAKL E+E +HI+T +AGT GY+APEY   G  T+K DVYSFGV+ LE++SGK  T+    E+ + ++ W   L  +    E++DP+  G      +A  +L +A  C + SP  RP M  VV +L+ ++    P
Sbjct:  814 LAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDL-GTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQGKIKVQPP 947          
The following BLAST results are available for this feature:
BLAST of CV884945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
Y1765_ARATH8.165e-2143.75Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH1.393e-2038.81Probable LRR receptor-like serine/threonine-protei... [more]
BRL3_ARATH1.393e-2039.72Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
Y5614_ARATH1.819e-2041.41Probable LRR receptor-like serine/threonine-protei... [more]
Y5457_ARATH1.819e-2039.69Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH4.052e-2040.74Probable LRR receptor-like serine/threonine-protei... [more]
SERK5_ARATH5.293e-2035.38Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
SERK4_ARATH5.293e-2035.38Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
Y5129_ARATH6.912e-2037.69Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH1.179e-1940.00Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011E08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884945 ID=CV884945; Name=CV884945; organism=Citrus sinensis; type=EST; length=913bp
ATTTTACAAAATGGCATAAATCAGACCATCTTTTTCAGAGGCCAAACTTT
TGAACTTATACAAATACATTTACAATTAATTAGAAAGAACAAATGCAAGA
GTGATTACAACTTTCAAGAAAAGAAAATGAAAAAAAAAATGAATAATTGA
GTCATACTGCAAGTGGAATTTCCAGATCACGTGGAGAGGAAAAAAACATC
TGCACCCACCCCATGCAGAATGAGGACACCAGAAGTAGGTAAATTAACCG
AGAATTCCATCAAGACTAATCAAATACTTGGAGAGGGGGTTCAAGCGGAT
AGCACGAAGCACTGCATCTTCATTTTTCATAAATCTGCACAAAGAATGAA
TAAATAAAATGGAGAAGCCGAACTGTTGCAGACTTTTAGTCACCTTTTCA
CTGCTGGCATCATCCAAAATATTCTACAAACTGCATTAACATGGATGCAA
ACTCAAATATGTCTTCATTGTCGCCGCAAAGTTTTCAATCTGAGTTGGAA
TCGTAAAAGTCACTTGGGCATGGGGTCATGACCTCAGATTCAAGAATCTG
GACCACTCTGTGCATGGTGGGTCGATCATCTGGGCTGGAAGATACACACT
GGGTGGCTACTGCAAGAAGGGCATCAAGACTTTCAGACTGAACCCCTTCA
CAATTTGGATCAATGATCTCTCGTTGCCTATCCTCCGATATTAGGAAATT
CAACCAACCAACAATATTGAGGCCTTTCTCAATAAAAGATGCATCAGTAG
GCCGCTTTCCACTTAAAACTTCAAGCACCAAGACCCCAAAGCTGTAAACA
TCAGTCTTTTCTGTAGCTCTACCACTTTGCATGTACTCTGGAGCCAAGTA
ACCAAATGTTCCTGCAACAATGGTTGTAATGTGAGATTCTTCATCTTCTA
AAAGTTTAGCAAG
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