CV884945

Overview
NameCV884945
Unique NameCV884945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.492e-14
Identity = 50/134 (37.31%), Postives = 77/134 (57.46%), Query Frame = -1
Query:  515 AKLLEDEESHITTI-VAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESE-VMTPCP 910
            A+L + +E+   T  +AGT GY+APEY+  G+ + K+DVYSFGV++LE++SG+R  + SF  +GL    W  ++  E +   IIDP         +  L+ +   CV  +   RPTM  V+  L SE ++ P P
Sbjct:  495 ARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGER--NNSFEGEGLAAFAWKRWV--EGKPEIIIDPFLIENPRNEIIKLIQIGLLCVQENSTKRPTMSSVIIWLGSETIIIPLP 624          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.492e-14
Identity = 45/120 (37.50%), Postives = 71/120 (59.17%), Query Frame = -1
Query:  539 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQR-EIIDPNCEGVQS-ESLDALLAVATQCVSSSPDDRPTMHRVVQILE 892
            ++SH++T + GT+GY APEY+ +G  T K+DVYS+GV++LEVLSG+R  D +       +V W   L++  R+   +ID   +   S E    +  +A +C++     RP M+ VV  LE
Sbjct:  233 DKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHLE 352          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.948e-14
Identity = 41/126 (32.54%), Postives = 74/126 (58.73%), Query Frame = -1
Query:  518 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPC 892
            + +H+TT+V+GT GY+ PEY QS + T+K+DVYSFGV+++E+++G++       ++   +  +    + E++  +IID    +G     + A   VA +C++     RP+M  V   L+S +  PC
Sbjct:  601 DHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKSISFLRSQENRTLATYFILAMKENKLFDIIDARIRDGCMLSQVTATAKVARKCLNLKGRKRPSMREVSMELDS-IRMPC 725          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.948e-14
Identity = 48/145 (33.10%), Postives = 82/145 (56.55%), Query Frame = -1
Query:  467 EDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE-GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCPSDFYDSNSD*KLCGDN 898
            ++ +S+++  V GT GYL PEY ++ + +EK+DV+SFGV++LE++SG+ P +        ++V W    I   +  EI+DP  + G  +E+L  ++ VA QC+      RP M  +V+ LE  ++    +  Y  + D  L G N
Sbjct:  749 QEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDALIIENNASEYMKSID-SLGGSN 892          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.544e-14
Identity = 45/128 (35.16%), Postives = 74/128 (57.81%), Query Frame = -1
Query:  542 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE----IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQIL 913
            LA+LL   +SH++T++AGT GY+APEY Q+ +AT + DVYS+GVL +E+ +G+R  D    E+ L  V W   +++ +   +     +     G  +E +  LL +  +C +  P  RP M  V+ +L
Sbjct:  962 LARLLNVGDSHVSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGRRAVDGG--EECL--VEWARRVMTGNMTAKGSPITLSGTKPGNGAEQMTELLKIGVKCTADHPQARPNMKEVLAML 1085          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.544e-14
Identity = 49/140 (35.00%), Postives = 72/140 (51.43%), Query Frame = -1
Query:  521 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTD--ASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESL-------DALLAVATQCVSSSPDDRPTMHRVVQILESEVMTP 913
            LAK   + ESH+TT VAGT GYLAPEY   G+ TEK+DVYSFGV++LE++ G++  D   S       I  W   L+   +  E ++ +    +   L       +  L V   C       RPT+   +++LE ++  P
Sbjct:  447 LAKQSREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPNTFLITDWAWSLVKAGKTEEALEQSLLREEGSGLSNPKGIMERFLQVGILCAHVLVALRPTILDALKMLEGDIEVP 586          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.544e-14
Identity = 49/139 (35.25%), Postives = 76/139 (54.68%), Query Frame = -1
Query:  515 LAKLLEDEES---HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTD--ASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT-PCP 913
            LAKL +  ++     T+ +AGT+GY+APEY   G+ + KTDV+SFGVLV+E+++GKR  +  ++  E   +++ W+     ED    +IDP+        +   + +   CV  S   RPTM  V  +L S   T P P
Sbjct:  503 LAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKRNNNGGSNGDEDAEDLLSWVWRSWREDTILSVIDPSLTAGSRNEILRCIHIGLLCVQESAATRPTMATVSLMLNSYSFTLPTP 641          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.544e-14
Identity = 50/120 (41.67%), Postives = 69/120 (57.50%), Query Frame = -1
Query:  539 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQS-ESLDALLAVATQCVSSSPDDRPTMHRVVQILE 895
            D  + ++ + AGT GYL PEY +    T K+DVYSFGV++LE+LSG++  D  F E+G NIV W   LI       I+DP        E+L  + +VA +CV     DRP+M +V   LE
Sbjct:  662 DSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAIDMQF-EEG-NIVEWAVPLIKAGDIFAILDPVLSPPSDLEALKKIASVACKCVRMRGKDRPSMDKVTTALE 779          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14
Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = -1
Query:  491 GYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQS--ESLDALLAVATQCVSSSPDDRPTMHRVVQILE----SEVMTPCPSDFYDSNS 853
            GY APE M++ + T K+DVYSFGVL+LE+L+GK P  +   +  +++  W+  ++ E+   E+ D      Q+  E +  +L +A  CV+  P+ RPTM  VV+++E    S+  T  PS   D NS
Sbjct:  521 GYRAPEVMETRKHTHKSDVYSFGVLILEMLTGKSPVQSPSRDDMVDLPRWVQSVVREEWTSEVFDIELMRFQNIEEEMVQMLQIAMACVAQVPEVRPTMDDVVRMIEEIRVSDSETTRPSS--DDNS 645          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14
Identity = 44/119 (36.97%), Postives = 71/119 (59.66%), Query Frame = -1
Query:  542 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQIL 895
            D ESH+ T+VAGT GYL PEY ++   +EK+DVYSFGV++LE+++ +   + +     +N   W+ F+++    + I+DP   E   +  +  ++ +A  CV+ S   RPTM  VV  L
Sbjct:  722 DGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVMNKNRERPHIN--EWVMFMLTNGDIKSIVDPKLNEDYDTNGVWKVVELALACVNPSSSRRPTMPHVVMEL 838          
The following BLAST results are available for this feature:
BLAST of CV884945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
CRK40_ARATH1.492e-1437.31Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
APK1B_ARATH1.492e-1437.50Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
WAKLH_ARATH1.948e-1432.54Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
NORK_MEDTR1.948e-1433.10Nodulation receptor kinase OS=Medicago truncatula ... [more]
Y1743_ARATH2.544e-1435.16Probable LRR receptor-like serine/threonine-protei... [more]
Y1105_ARATH2.544e-1435.00Probable receptor-like protein kinase At1g11050 OS... [more]
CRK29_ARATH2.544e-1435.25Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRI4_MAIZE2.544e-1441.67Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
Y5830_ARATH3.323e-1437.01Probable inactive receptor kinase At5g58300 OS=Ara... [more]
Y5189_ARATH3.323e-1436.97Probable LRR receptor-like protein kinase At1g5189... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011E08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884945 ID=CV884945; Name=CV884945; organism=Citrus sinensis; type=EST; length=913bp
ATTTTACAAAATGGCATAAATCAGACCATCTTTTTCAGAGGCCAAACTTT
TGAACTTATACAAATACATTTACAATTAATTAGAAAGAACAAATGCAAGA
GTGATTACAACTTTCAAGAAAAGAAAATGAAAAAAAAAATGAATAATTGA
GTCATACTGCAAGTGGAATTTCCAGATCACGTGGAGAGGAAAAAAACATC
TGCACCCACCCCATGCAGAATGAGGACACCAGAAGTAGGTAAATTAACCG
AGAATTCCATCAAGACTAATCAAATACTTGGAGAGGGGGTTCAAGCGGAT
AGCACGAAGCACTGCATCTTCATTTTTCATAAATCTGCACAAAGAATGAA
TAAATAAAATGGAGAAGCCGAACTGTTGCAGACTTTTAGTCACCTTTTCA
CTGCTGGCATCATCCAAAATATTCTACAAACTGCATTAACATGGATGCAA
ACTCAAATATGTCTTCATTGTCGCCGCAAAGTTTTCAATCTGAGTTGGAA
TCGTAAAAGTCACTTGGGCATGGGGTCATGACCTCAGATTCAAGAATCTG
GACCACTCTGTGCATGGTGGGTCGATCATCTGGGCTGGAAGATACACACT
GGGTGGCTACTGCAAGAAGGGCATCAAGACTTTCAGACTGAACCCCTTCA
CAATTTGGATCAATGATCTCTCGTTGCCTATCCTCCGATATTAGGAAATT
CAACCAACCAACAATATTGAGGCCTTTCTCAATAAAAGATGCATCAGTAG
GCCGCTTTCCACTTAAAACTTCAAGCACCAAGACCCCAAAGCTGTAAACA
TCAGTCTTTTCTGTAGCTCTACCACTTTGCATGTACTCTGGAGCCAAGTA
ACCAAATGTTCCTGCAACAATGGTTGTAATGTGAGATTCTTCATCTTCTA
AAAGTTTAGCAAG
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