CV884945

Overview
NameCV884945
Unique NameCV884945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14
Identity = 46/133 (34.59%), Postives = 73/133 (54.89%), Query Frame = -1
Query:  521 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLA--VATQCVSSSPDDRPTMHRVVQILESEVMTP 913
            LA+L E      TT+V GT GY+APE  ++G+++  +DV++FGVL+LE++SG+RPTD+        +  W+  L +       +DP   G   + ++A LA  V   C    P  RP+M  V++ L  +   P
Sbjct:  511 LARLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTDSG----TFFLADWVMELHARGEILHAVDPRL-GFGYDGVEARLALVVGLLCCHQRPTSRPSMRTVLRYLNGDDDVP 638          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14
Identity = 55/153 (35.95%), Postives = 88/153 (57.52%), Query Frame = -1
Query:  533 LAKLLEDEESH-----ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIV-----------------GWLN--FLISEDRQREIIDPNCE--GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESE 913
            LAK L+ E++        + VAG++GY+APEY  + +  EK+DVYSFGV++LE+++GKRP D+SF E   +IV                 G +N   L +     +++DP  +    + E ++ +L VA  C SS P +RPTM +VV++L+ +
Sbjct:  838 LAKPLKREDNDGVSDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELITGKRPNDSSFGE-NKDIVKFAMEAALCYPSPSAEDGAMNQDSLGNYRDLSKLVDPKMKLSTREYEEIEKVLDVALLCTSSFPINRPTMRKVVELLKEK 989          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14
Identity = 44/127 (34.65%), Postives = 74/127 (58.27%), Query Frame = -1
Query:  503 VAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL-NIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT---PCPSDFY 868
            V GTFGY+ PEY+ +G+ + K+DVYSFGVL+LE++ GK+ +    I+  + N+V  +  L +     E++DP   E    + +   + +   CV  +PDDRP+M  + ++L +  +T   P P  F+
Sbjct:  525 VVGTFGYMPPEYVANGQFSTKSDVYSFGVLILEIIGGKKNSSFHQIDGSVSNLVTHVWRLRNNGSLLELVDPAIGENYDKDEVIRCIHIGLLCVQENPDDRPSMSTIFRMLTNVSITLPVPQPPGFF 651          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14
Identity = 49/129 (37.98%), Postives = 70/129 (54.26%), Query Frame = -1
Query:  515 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN-CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILES-EVMTPCP 895
            D+   IT   AGT GY+APEYM+ G  + K+DVYS+GVLVLE++ GKR T  SF     N V ++  L        ++D    E  +SE +   + +A  CV   P DRP    ++ +L S  ++ P P
Sbjct:  511 DQSVAITANAAGTPGYMAPEYMELGEFSMKSDVYSYGVLVLEIICGKRNT--SFSSPVQNFVTYVWRLWKSGTPLNLVDATIAENYKSEEVIRCIHIALLCVQEEPTDRPDFSIIMSMLTSNSLILPVP 637          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14
Identity = 44/120 (36.67%), Postives = 70/120 (58.33%), Query Frame = -1
Query:  539 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQR-EIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 892
            +++H++T V GT GY APEY+ +GR T K+DVYSFGV++LE+LSG+R  D S +    ++V W    + + R+   I+D    G    +      ++A QC++     RP M  V+  L+
Sbjct:  245 DKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVLAKLD 364          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.340e-14
Identity = 46/125 (36.80%), Postives = 67/125 (53.60%), Query Frame = -1
Query:  539 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLN-------FLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 892
            + SHITT+V GT GYL PEY  + + TEK+DVYSFGV++LE++ G+ P   S      N+V W         F I +D  +E  DP        S+    ++A +CV      RP++  V+  L+
Sbjct:  761 DASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSHSGSPDSFNLVLWARPNLQAGAFEIVDDILKETFDP-------ASMKKAASIAIRCVGRDASGRPSIAEVLTKLK 878          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.340e-14
Identity = 47/135 (34.81%), Postives = 74/135 (54.81%), Query Frame = -1
Query:  500 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVG---WLNFLISEDRQREIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCPSDFYD 892
            +++H TT+++GT GY+ PEY QS + TEK+DVYSFGV++ E+++G +P     ++    IV         + E R  +IID       + E + A+  VA +C+SS    RP M  V   LE    +P  S  ++
Sbjct:  607 DQTHWTTVISGTVGYVDPEYYQSSQYTEKSDVYSFGVILAELITGDKP--VIMVQNTQEIVALAEHFRVAMKEKRLTDIIDARIRNDCKPEQVMAVAKVAMKCLSSKGKKRPNMREVFTELERICTSPEDSQVHN 739          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.340e-14
Identity = 43/121 (35.54%), Postives = 71/121 (58.68%), Query Frame = -1
Query:  542 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIE--KGLNIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQIL 895
            D+    T  + GT+GY++PEY   G+ + K+DVYSFGVLVLE++SGK+ ++   ++     N+V +   L S     E++DP+  +  +   +   + +A  CV    +DRPTM  +VQ+L
Sbjct:  504 DQTEANTRRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGKKNSNVYQMDGTSAGNLVTYTWRLWSNGSPLELVDPSFRDNYRINEVSRCIHIALLCVQEEAEDRPTMSAIVQML 624          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.340e-14
Identity = 47/130 (36.15%), Postives = 72/130 (55.38%), Query Frame = -1
Query:  515 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTD-ASFIEKGLNIVGWLNFLISEDRQREIIDPNCE-GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT-PCP 895
            D+    T  V GT GY++PEY+  G+ + K+DVYSFGVLVLE++SGKR ++     E G N+V +           E++D   E   QS  +   + +A  CV + P+ RP +  ++ +L S  +T P P
Sbjct:  474 DQSRADTRRVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISGKRNSNFHETDESGKNLVTYAWRHWRNGSPLELVDSELEKNYQSNEVFRCIHIALLCVQNDPEQRPNLSTIIMMLTSNSITLPVP 603          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.668e-14
Identity = 54/141 (38.30%), Postives = 81/141 (57.45%), Query Frame = -1
Query:  536 LAKLLEDEESHITTIVAGTFG---YLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIE---------KGLNIVGWLNFLISEDRQREIIDPNC--EGVQSESLDALLAVATQCV-SSSPDDRPTMHRVVQILES 913
            LA+L+   ++H++T V G FG   Y+APEY ++  AT K DVYSFGV++LE+++G++ T  + +          KG N+V W+  L SE + +E ID +    GV  E +  +L VA  CV       RPTM  V Q+L +
Sbjct:  450 LARLMNPIDTHLSTFVNGEFGDFGYVAPEYSRTMVATPKGDVYSFGVVLLELVTGQKATSVTKVSEEKAEEENFKG-NLVEWITKLSSESKLQEAIDRSLLGNGVDDE-IFKVLKVACNCVLPEIAKQRPTMFEVYQLLRA 588          
The following BLAST results are available for this feature:
BLAST of CV884945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
LRKA2_ARATH3.323e-1434.59Lectin-domain containing receptor kinase A4.2 OS=A... [more]
HSL2_ARATH3.323e-1435.95LRR receptor-like serine/threonine-protein kinase ... [more]
CRK21_ARATH3.323e-1434.65Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
CRK13_ARATH3.323e-1437.98Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
APK2B_ARATH3.323e-1436.67Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y5487_ARATH4.340e-1436.80Probable LRR receptor-like serine/threonine-protei... [more]
WAKLN_ARATH4.340e-1434.81Wall-associated receptor kinase-like 18 OS=Arabido... [more]
CRK4_ARATH4.340e-1435.54Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK33_ARATH4.340e-1436.15Putative cysteine-rich receptor-like protein kinas... [more]
Y5838_ARATH5.668e-1438.30Probably inactive leucine-rich repeat receptor-lik... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_011E08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884945 ID=CV884945; Name=CV884945; organism=Citrus sinensis; type=EST; length=913bp
ATTTTACAAAATGGCATAAATCAGACCATCTTTTTCAGAGGCCAAACTTT
TGAACTTATACAAATACATTTACAATTAATTAGAAAGAACAAATGCAAGA
GTGATTACAACTTTCAAGAAAAGAAAATGAAAAAAAAAATGAATAATTGA
GTCATACTGCAAGTGGAATTTCCAGATCACGTGGAGAGGAAAAAAACATC
TGCACCCACCCCATGCAGAATGAGGACACCAGAAGTAGGTAAATTAACCG
AGAATTCCATCAAGACTAATCAAATACTTGGAGAGGGGGTTCAAGCGGAT
AGCACGAAGCACTGCATCTTCATTTTTCATAAATCTGCACAAAGAATGAA
TAAATAAAATGGAGAAGCCGAACTGTTGCAGACTTTTAGTCACCTTTTCA
CTGCTGGCATCATCCAAAATATTCTACAAACTGCATTAACATGGATGCAA
ACTCAAATATGTCTTCATTGTCGCCGCAAAGTTTTCAATCTGAGTTGGAA
TCGTAAAAGTCACTTGGGCATGGGGTCATGACCTCAGATTCAAGAATCTG
GACCACTCTGTGCATGGTGGGTCGATCATCTGGGCTGGAAGATACACACT
GGGTGGCTACTGCAAGAAGGGCATCAAGACTTTCAGACTGAACCCCTTCA
CAATTTGGATCAATGATCTCTCGTTGCCTATCCTCCGATATTAGGAAATT
CAACCAACCAACAATATTGAGGCCTTTCTCAATAAAAGATGCATCAGTAG
GCCGCTTTCCACTTAAAACTTCAAGCACCAAGACCCCAAAGCTGTAAACA
TCAGTCTTTTCTGTAGCTCTACCACTTTGCATGTACTCTGGAGCCAAGTA
ACCAAATGTTCCTGCAACAATGGTTGTAATGTGAGATTCTTCATCTTCTA
AAAGTTTAGCAAG
back to top