CV884945

Overview
NameCV884945
Unique NameCV884945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.668e-14
Identity = 43/114 (37.72%), Postives = 71/114 (62.28%), Query Frame = -1
Query:  551 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVV 889
            E+H++T+VAGT GYL PEY ++   TEK+DVYSFGV++L +++ +   D +   +  +I  W+  ++++   + I DPN  G   S S+   + +A  C++ S   RPTM +VV
Sbjct:  732 ETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVIDQN--REKRHIAEWVGGMLTKGDIKSITDPNLLGDYNSGSVWKAVELAMSCMNPSSMTRPTMSQVV 843          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.668e-14
Identity = 44/126 (34.92%), Postives = 70/126 (55.56%), Query Frame = -1
Query:  539 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 913
            L+K +   ++H++T V G+FGYL PEY +  + T+K+DVYSFGV++LE L  +   +     + +N+  W      +    +IIDP+  G +  ES+      A +C+     DRPTM  V+  LE
Sbjct:  671 LSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAMQWKRKGLLEKIIDPHLAGTINPESMKKFAEAAEKCLEDYGVDRPTMGDVLWNLE 796          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.668e-14
Identity = 40/115 (34.78%), Postives = 70/115 (60.87%), Query Frame = -1
Query:  539 IVAGTFGYLAPEYMQSGRA--TEKTDVYSFGVLVLEVLSGKRPTDASFI-EKGLNIVGWLNFLISEDRQREIIDPNCEGVQS-ESLDALLAVATQCVSSSPDDRPTMHRVVQILE 871
            I+ G+ GYL PE++Q      T K+DVY FGV++ E+++GK+P +  ++ EK  N+V W+  L+ +++  + IDP  +   S E ++  L +   C +  P  RP+M +VV +L+
Sbjct:  731 IIHGSPGYLPPEFLQPEHELPTPKSDVYCFGVVLFELMTGKKPIEDDYLDEKDTNLVSWVRSLVRKNQASKAIDPKIQETGSEEQMEEALKIGYLCTADLPSKRPSMQQVVGLLK 845          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.668e-14
Identity = 43/115 (37.39%), Postives = 62/115 (53.91%), Query Frame = -1
Query:  539 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 883
            H++T+V GT GYL PEY  + + T+K+DVYS GV++LE+ +G +P     I  G NIV  +N           +D     V  E L+    +A +C     D RP+M  VV+ LE
Sbjct:  786 HVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQP-----ITHGKNIVREINIAYESGSILSTVDKRMSSVPDECLEKFATLALRCCREETDARPSMAEVVRELE 895          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.668e-14
Identity = 46/132 (34.85%), Postives = 80/132 (60.61%), Query Frame = -1
Query:  542 LAKLLE---DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWL--NFLISEDRQREIIDPNCEGVQSESLDA---LLAVATQCVSSSPDDRPTMHRVVQIL 913
            LAK+L    D  +   T  A ++GY+APEY  S +ATEK+DVYS G++++E+++GK PTD+ F  + +++V W+  +  ++   + ++IDP  + +     DA   +L +A QC  +SP +RP+  +    L
Sbjct: 1105 LAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTDSVFGAE-MDMVRWVETHLEVAGSARDKLIDPKLKPLLPFEEDAACQVLEIALQCTKTSPQERPSSRQACDSL 1235          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.668e-14
Identity = 42/121 (34.71%), Postives = 67/121 (55.37%), Query Frame = -1
Query:  512 VAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILES-EVMTPCPS 868
            +AGT GY+APEY+  GR + K D YSFGVLVLE+ SG R            +V  +    + ++  E+ID +  E    + +  ++ +   C   SP  RPTM +V+Q++ S +++ P P+
Sbjct:  496 IAGTLGYMAPEYISKGRLSNKIDAYSFGVLVLEITSGFRNNKFRSDNSLETLVTQVWKCFASNKMEEMIDKDMGEDTDKQEMKRVMQIGLLCTQESPQLRPTMSKVIQMVSSTDIVLPTPT 616          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.402e-14
Identity = 44/118 (37.29%), Postives = 67/118 (56.78%), Query Frame = -1
Query:  539 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 889
            ++H++T+V GTFGYL PEY +    TEK+DVYSFGV++LEVL  +     S   +  +++ W+          +IID +    + S SL+    +A +CV     +RP M+ VV  LE
Sbjct:  677 QTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADLIRWVKSNYRRGTVDQIIDSDLSADITSTSLEKFCEIAVRCVQDRGMERPPMNDVVWALE 794          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.402e-14
Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = -1
Query:  539 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN-CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 892
            +E+H++T V G+FGYL PEY +  + T+K+DVYSFGV++ EVL  +   D   + + +N+  W      +    +I+DPN  + ++  SL      A +C +    DRPT+  V+  LE
Sbjct:  642 DETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPLLVREQVNLAEWAIEWQRKGMLDQIVDPNIADEIKPCSLKKFAETAEKCCADYGVDRPTIGDVLWNLE 760          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.402e-14
Identity = 42/115 (36.52%), Postives = 67/115 (58.26%), Query Frame = -1
Query:  551 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVV 895
            DE    T+ V GT+GY+APEY++ G+ + K+DVYSFGV++LE++SG++  + +F  +GL    W  ++  E     IIDP         +  L+ +   CV  +   RPTM+ V+
Sbjct:  493 DETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEK--NKNFETEGLPAFAWKRWI--EGELESIIDPYLNENPRNEIIKLIQIGLLCVQENAAKRPTMNSVI 603          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.668e-14
Identity = 43/118 (36.44%), Postives = 69/118 (58.47%), Query Frame = -1
Query:  539 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 889
            ++H++T+V GTFGYL PEY +    TEK+DVYSFGV++LEVL  +     S   +  +++ W+    ++    +IID +    + S S++    +A +CV     +RP M+ VV  LE
Sbjct:  684 QTHVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADLIRWVKSNFNKRTVDQIIDSDLTADITSTSMEKFCEIAIRCVQDRGMERPPMNDVVWALE 801          
The following BLAST results are available for this feature:
BLAST of CV884945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
Y5181_ARATH5.668e-1437.72Probable LRR receptor-like serine/threonine-protei... [more]
Y4391_ARATH5.668e-1434.92Probable receptor-like protein kinase At4g39110 OS... [more]
Y2242_ARATH5.668e-1434.78Probable LRR receptor-like serine/threonine-protei... [more]
Y1684_ARATH5.668e-1437.39Probable LRR receptor-like serine/threonine-protei... [more]
GSO1_ARATH5.668e-1434.85LRR receptor-like serine/threonine-protein kinase ... [more]
CRK43_ARATH5.668e-1434.71Putative cysteine-rich receptor-like protein kinas... [more]
Y5900_ARATH7.402e-1437.29Putative receptor-like protein kinase At5g39000 OS... [more]
Y5241_ARATH7.402e-1435.29Probable receptor-like protein kinase At5g24010 OS... [more]
CRK36_ARATH7.402e-1436.52Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
Y5389_ARATH9.668e-1436.44Probable receptor-like protein kinase At5g38990 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011E08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884945 ID=CV884945; Name=CV884945; organism=Citrus sinensis; type=EST; length=913bp
ATTTTACAAAATGGCATAAATCAGACCATCTTTTTCAGAGGCCAAACTTT
TGAACTTATACAAATACATTTACAATTAATTAGAAAGAACAAATGCAAGA
GTGATTACAACTTTCAAGAAAAGAAAATGAAAAAAAAAATGAATAATTGA
GTCATACTGCAAGTGGAATTTCCAGATCACGTGGAGAGGAAAAAAACATC
TGCACCCACCCCATGCAGAATGAGGACACCAGAAGTAGGTAAATTAACCG
AGAATTCCATCAAGACTAATCAAATACTTGGAGAGGGGGTTCAAGCGGAT
AGCACGAAGCACTGCATCTTCATTTTTCATAAATCTGCACAAAGAATGAA
TAAATAAAATGGAGAAGCCGAACTGTTGCAGACTTTTAGTCACCTTTTCA
CTGCTGGCATCATCCAAAATATTCTACAAACTGCATTAACATGGATGCAA
ACTCAAATATGTCTTCATTGTCGCCGCAAAGTTTTCAATCTGAGTTGGAA
TCGTAAAAGTCACTTGGGCATGGGGTCATGACCTCAGATTCAAGAATCTG
GACCACTCTGTGCATGGTGGGTCGATCATCTGGGCTGGAAGATACACACT
GGGTGGCTACTGCAAGAAGGGCATCAAGACTTTCAGACTGAACCCCTTCA
CAATTTGGATCAATGATCTCTCGTTGCCTATCCTCCGATATTAGGAAATT
CAACCAACCAACAATATTGAGGCCTTTCTCAATAAAAGATGCATCAGTAG
GCCGCTTTCCACTTAAAACTTCAAGCACCAAGACCCCAAAGCTGTAAACA
TCAGTCTTTTCTGTAGCTCTACCACTTTGCATGTACTCTGGAGCCAAGTA
ACCAAATGTTCCTGCAACAATGGTTGTAATGTGAGATTCTTCATCTTCTA
AAAGTTTAGCAAG
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