CV884945

Overview
NameCV884945
Unique NameCV884945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.179e-19
Identity = 55/128 (42.97%), Postives = 77/128 (60.16%), Query Frame = -1
Query:  539 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIE--KGLNIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 913
            LA+LL   E+H TT VAGTFGY+APEY  + R ++K DVYS+GV++LE+LS K+  D SF+    G NIV W   L+ + R +E       +    + L  +L +A  C   S   RPTM +VV+ L+
Sbjct: 1017 LARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFVSYGNGFNIVQWACMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLK 1144          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.011e-19
Identity = 52/129 (40.31%), Postives = 76/129 (58.91%), Query Frame = -1
Query:  530 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP-NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 913
            L++  E++ +H++++  GT GYL PEY  S + TEK+DVYSFGV++ E+LSGK+P  A      LNIV W   LI +     IIDP     V+ ES+  +  VA QCV     +RP M  V+  ++  +
Sbjct:  752 LSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWARSLIRKGDVCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVAIQDAI 880          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.627e-19
Identity = 49/127 (38.58%), Postives = 80/127 (62.99%), Query Frame = -1
Query:  536 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILES 913
            LA+L+   ++H+TT + GT GY+ PEY Q+  AT K DVYSFGV++LE+L+G+RP D        +++ W+  + +E R+ EI DP   +   +E +  +L +A +C+  +P  RPT  ++V  LE+
Sbjct:  890 LARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWVLQMKTEKRESEIFDPFIYDKDHAEEMLLVLEIACRCLGENPKTRPTTQQLVSWLEN 1016          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.431e-19
Identity = 49/126 (38.89%), Postives = 80/126 (63.49%), Query Frame = -1
Query:  539 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 913
            L+K+   +ES+I+  + GTFGYL PEY+Q+ + TEK+DVY+FGV++LEVL  +   D     + +N+  W+ F  S+    EI+DP+  G +++ SL   + +A +C+    D+RP+M  V+  LE
Sbjct:  634 LSKIHNQDESNISINIKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVLFARPAIDPYLPHEEVNLSEWVMFCKSKGTIDEILDPSLIGQIETNSLKKFMEIAEKCLKEYGDERPSMRDVIWDLE 759          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.643e-19
Identity = 53/131 (40.46%), Postives = 82/131 (62.60%), Query Frame = -1
Query:  533 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTD--ASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDA--LLAVATQCVSSSPDDRPTMHRVVQILESE 913
            LAKLL  E+SH+TT V GT G++APEY+ +G+++EKTDV+ FG+L+LE+++G R  +   S  +KG  ++ W+  L  E +  E++D    G   + ++   +L VA  C    P  RP M  VVQ+LE +
Sbjct:  443 LAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGA-MLEWVRKLHKEMKVEELVDREL-GTTYDRIEVGEMLQVALLCTQFLPAHRPKMSEVVQMLEGD 571          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.643e-19
Identity = 51/128 (39.84%), Postives = 80/128 (62.50%), Query Frame = -1
Query:  539 LAKLLEDEESHIT-TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDAL--LAVATQCVSSSPDDRPTMHRVVQILE 913
            +A+L+   ++H++ + +AGT GY+ PEY QS R T K DVYS+GV++LE+LSGK+P D     +  N+VGW   L  E R  EI+DP     +S  ++    L +A+QC+   P  RPTM +++ + +
Sbjct: 1008 MARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPGEFGEDNNLVGWAKQLYREKRGAEILDPELVTDKSGDVELFHYLKIASQCLDDRPFKRPTMIQLMAMFK 1135          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.982e-19
Identity = 52/118 (44.07%), Postives = 72/118 (61.02%), Query Frame = -1
Query:  539 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQ--SESLDALLAVATQCVSSSPDDRPTMHRVVQILE 886
            S+++T V GT+GY APEYM SG    ++DVYSFGVL+LE+LSGKR  D +   K  N+V W    ++  R+  +I  N    Q   E    + +VA QC+S  P  RPTM +VV+ L+
Sbjct:  233 SYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCLSFEPKSRPTMDQVVRALQ 350          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.304e-18
Identity = 54/128 (42.19%), Postives = 82/128 (64.06%), Query Frame = -1
Query:  542 LAKLLEDEE-SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG---VQSESLDALLAVATQCVSSSPDDRPTMHRVVQIL 913
            LAKL++D + +  +  +AG++GY+APEY  S + TEK+DVYS+GV+VLEVL+GK+P D + I  GL+IV W    + + R  ++ID   +     + E +   L VA  C++  P+DRPTM  V  +L
Sbjct:  941 LAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPT-IPDGLHIVDW----VKKIRDIQVIDQGLQARPESEVEEMMQTLGVALLCINPIPEDRPTMKDVAAML 1063          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.304e-18
Identity = 53/144 (36.81%), Postives = 85/144 (59.03%), Query Frame = -1
Query:  491 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILES--EVMTPCPSDFYDSNS 913
            LA+L  ++++HI+T +AGT GY+APEY+  G+ TEK DVYSFGVL++EV++GKR  + +F++   +I+  +  L       E +DP   +         LL +   CV ++ D RP M  VV++++   E+ TP    F +  S
Sbjct:  469 LARLFPEDKTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKR--NNAFVQDAGSILQSVWSLYRTSNVEEAVDPILGDNFNKIEASRLLQIGLLCVQAAFDQRPAMSVVVKMMKGSLEIHTPTQPPFLNPGS 610          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.703e-18
Identity = 51/129 (39.53%), Postives = 83/129 (64.34%), Query Frame = -1
Query:  539 LAKLLEDEE-SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG---VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 913
            LAKL+++ +    +  VAG++GY+APEY  S + TEK+DVYS+GV+VLEVL+GK+P D + + +G+++V W+          E++D         +++ +  +L  A  CV+SSPD+RPTM  V  +L+
Sbjct:  940 LAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPT-VPEGIHLVDWVR---QNRGSLEVLDSTLRSRTEAEADEMMQVLGTALLCVNSSPDERPTMKDVAAMLK 1064          
The following BLAST results are available for this feature:
BLAST of CV884945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
RPK2_ARATH1.179e-1942.97LRR receptor-like serine/threonine-protein kinase ... [more]
Y1677_ARATH2.011e-1940.31Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_DAUCA2.627e-1938.58Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
Y2232_ARATH3.431e-1938.89Probable receptor-like protein kinase At2g23200 OS... [more]
Y2239_ARATH7.643e-1940.46Probable LRR receptor-like serine/threonine-protei... [more]
BRL1_ARATH7.643e-1939.84Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
BIK1_ARATH9.982e-1944.07Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
RCH1_ARATH1.304e-1842.19LRR receptor-like serine/threonine-protein kinase ... [more]
CRK3_ARATH1.304e-1836.81Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
RCH2_ARATH1.703e-1839.53Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011E08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884945 ID=CV884945; Name=CV884945; organism=Citrus sinensis; type=EST; length=913bp
ATTTTACAAAATGGCATAAATCAGACCATCTTTTTCAGAGGCCAAACTTT
TGAACTTATACAAATACATTTACAATTAATTAGAAAGAACAAATGCAAGA
GTGATTACAACTTTCAAGAAAAGAAAATGAAAAAAAAAATGAATAATTGA
GTCATACTGCAAGTGGAATTTCCAGATCACGTGGAGAGGAAAAAAACATC
TGCACCCACCCCATGCAGAATGAGGACACCAGAAGTAGGTAAATTAACCG
AGAATTCCATCAAGACTAATCAAATACTTGGAGAGGGGGTTCAAGCGGAT
AGCACGAAGCACTGCATCTTCATTTTTCATAAATCTGCACAAAGAATGAA
TAAATAAAATGGAGAAGCCGAACTGTTGCAGACTTTTAGTCACCTTTTCA
CTGCTGGCATCATCCAAAATATTCTACAAACTGCATTAACATGGATGCAA
ACTCAAATATGTCTTCATTGTCGCCGCAAAGTTTTCAATCTGAGTTGGAA
TCGTAAAAGTCACTTGGGCATGGGGTCATGACCTCAGATTCAAGAATCTG
GACCACTCTGTGCATGGTGGGTCGATCATCTGGGCTGGAAGATACACACT
GGGTGGCTACTGCAAGAAGGGCATCAAGACTTTCAGACTGAACCCCTTCA
CAATTTGGATCAATGATCTCTCGTTGCCTATCCTCCGATATTAGGAAATT
CAACCAACCAACAATATTGAGGCCTTTCTCAATAAAAGATGCATCAGTAG
GCCGCTTTCCACTTAAAACTTCAAGCACCAAGACCCCAAAGCTGTAAACA
TCAGTCTTTTCTGTAGCTCTACCACTTTGCATGTACTCTGGAGCCAAGTA
ACCAAATGTTCCTGCAACAATGGTTGTAATGTGAGATTCTTCATCTTCTA
AAAGTTTAGCAAG
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