CV884945

Overview
NameCV884945
Unique NameCV884945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV884945_ssr701 microsatellite CV884945_ssr701:701..712. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig3378 contig Csv1_Contig3378:526..1440. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.594e-16
Identity = 45/127 (35.43%), Postives = 77/127 (60.63%), Query Frame = -1
Query:  536 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILES 913
            L++L+    +H+TT + GT GY+ PEY Q+  AT + DVYSFGV++LE+L+GKRP +    +    +V W++ +  + +  E+ D    E    E++  +L +A  CV+ +P  RP + +VV  L++
Sbjct:  950 LSRLILPYRTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGKRPMEVFRPKMSRELVAWVHTMKRDGKPEEVFDTLLRESGNEEAMLRVLDIACMCVNQNPMKRPNIQQVVDWLKN 1076          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.081e-16
Identity = 46/124 (37.10%), Postives = 73/124 (58.87%), Query Frame = -1
Query:  488 GYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQS--ESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCPSDFYDSNSD 853
            GY APE +++ + T K+DVYSFGVL+LE+L+GK P  AS  E+G+++  W+  ++ E+   E+ D       +  E +  LL +A  CVS+ PD RP M  V++++E    +    D    +SD
Sbjct:  511 GYHAPEVLETRKVTFKSDVYSFGVLLLELLTGKSPNQASLGEEGIDLPRWVLSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMACVSTVPDQRPVMQEVLRMIEDVNRSETTDDGLRQSSD 634          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.081e-16
Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = -1
Query:  539 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 883
            H+TT+V G+FGYL PEY +  + TEK+DVYSFGV++ EVL  +   + S  ++ +++  W      +    +IIDPN +G +  E L      A +C+S S  DRPTM  V+  LE
Sbjct:  677 HVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPSLSKEQVSLGDWAMNCKRKGTLEDIIDPNLKGKINPECLKKFADTAEKCLSDSGLDRPTMGDVLWNLE 792          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.718e-16
Identity = 49/119 (41.18%), Postives = 72/119 (60.50%), Query Frame = -1
Query:  539 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGV-QSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 892
            +ESH++T+VAGTFGYL  EY Q+ R +EK+DVYSFGV++LE+++ K   D +      +I  W+  +++      I+DP  +GV  S S    L +A  CV+ S   RP M  VV  L+
Sbjct:  721 DESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNKPVIDHN--RDMPHIAEWVKLMLTRGDISNIMDPKLQGVYDSGSAWKALELAMTCVNPSSLKRPNMSHVVHELK 837          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.718e-16
Identity = 51/148 (34.46%), Postives = 85/148 (57.43%), Query Frame = -1
Query:  461 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSE-SLDALLAV---ATQCVSSSPDDRPTMHRVVQILESEVMTPCPSDFYDSNSD*KLCGDNED 892
            +++H+TT VAGTFGY+ PEY QS + T+K+DVYSFGV+++E+++GK P+     E+           + E+R  +I+D   E ++ E +LD ++AV   A +C++     RP M  V   LE    +   S+ ++ + D     D +D
Sbjct:  577 DQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNPSSRVQSEENRGFAAHFVAAVKENRFLDIVD---ERIKDECNLDQVMAVAKLAKRCLNRKGKKRPNMREVSVELERIRSSSYKSEIHNDDDDDDDDDDEDD 721          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.718e-16
Identity = 47/126 (37.30%), Postives = 75/126 (59.52%), Query Frame = -1
Query:  542 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE-DRQREIIDPNCEGV-QSESLDALLAVATQCVSSSPDDRPTMHRVVQIL 913
            LA L  + E  ++T V G+FGY APE+  SG  T K+DVY+FGV++LE+L+G++P D+S      ++V W    + + D   +++DP+  G+  ++SL     +   C+   P+ RP M  VVQ L
Sbjct:  544 LAALTPNTERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRTRAEQSLVRWATPQLHDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQPEPEFRPPMSEVVQQL 669          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.718e-16
Identity = 59/143 (41.26%), Postives = 80/143 (55.94%), Query Frame = -1
Query:  542 LAKLLEDEESHIT-TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKG-LNIVGWLNFLISEDRQREIIDPNC--EGVQSESLD---------------ALLAVATQCVSSSPDDRPTMHRVVQIL 913
            +A+L+   ++H++ + +AGT GY+ PEY QS R T K DVYS GV++LE+LSGKRPTD    E G  N+VGW      E +  E+ID +   EG  SESL+                 L +A +CV   P  RP M +VV  L
Sbjct:  987 MARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLEILSGKRPTDKE--EFGDTNLVGWSKMKAREGKHMEVIDEDLLKEG-SSESLNEKEGFEGGVIVKEMLRYLEIALRCVDDFPSKRPNMLQVVASL 1126          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.550e-16
Identity = 47/136 (34.56%), Postives = 80/136 (58.82%), Query Frame = -1
Query:  503 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL-NIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT---PCPSDFY 895
            D+   +T  V GT+GY++PEY   G+ + K+DVYSFGVLVLE++SG + +    +++ + N+V +   L S     E++DP+  +  Q+  +   + +A  CV    +DRPTM  +VQ+L + ++    P P  F+
Sbjct:  479 DQTEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGMKNSSLYQMDESVGNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDAEDRPTMSSIVQMLTTSLIALAEPRPPGFF 614          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.550e-16
Identity = 53/135 (39.26%), Postives = 81/135 (60.00%), Query Frame = -1
Query:  494 TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIE-KGL--NIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT---PCPSDFYDSN 877
            T  V GTFGY++PEY+  G+ + K+DVYSFGVL+LE++SGK+  ++SF +  GL  N+V ++  L       E+IDP   E  +S+ +   + +   CV  +P DRPTM  + Q+L +  +T   P P  F+  N
Sbjct:  518 TARVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKK--NSSFYQMDGLVNNLVTYVWKLWENKTMHELIDPFIKEDCKSDEVIRYVHIGLLCVQENPADRPTMSTIHQVLTTSSITLPVPQPPGFFFRN 650          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.637e-16
Identity = 41/114 (35.96%), Postives = 66/114 (57.89%), Query Frame = -1
Query:  521 GYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQS---ESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTP 853
            GY APE   + + ++K DVYSFGVL+LE+L+GK PT     E+G+++  W++ +  +    ++ DP     QS   E++  LL +   C +  PD RPTM  V +++E    +P
Sbjct:  504 GYRAPEVTDARKISQKADVYSFGVLILELLTGKSPTHQQLHEEGVDLPRWVSSITEQQSPSDVFDPELTRYQSDSNENMIRLLNIGISCTTQYPDSRPTMPEVTRLIEEVSRSP 617          
The following BLAST results are available for this feature:
BLAST of CV884945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
PSYR1_ARATH1.594e-1635.43Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
Y2267_ARATH2.081e-1637.10Probable inactive receptor kinase At2g26730 OS=Ara... [more]
ANX2_ARATH2.081e-1640.52Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
Y1756_ARATH2.718e-1641.18Probable LRR receptor-like serine/threonine-protei... [more]
WAKLD_ARATH2.718e-1634.46Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
SRF8_ARATH2.718e-1637.30Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
BRL2_ARATH2.718e-1641.26Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
CRK19_ARATH3.550e-1634.56Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK17_ARATH3.550e-1639.26Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
Y5659_ARATH4.637e-1635.96Probable inactive receptor kinase At5g16590 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011E08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884945 ID=CV884945; Name=CV884945; organism=Citrus sinensis; type=EST; length=913bp
ATTTTACAAAATGGCATAAATCAGACCATCTTTTTCAGAGGCCAAACTTT
TGAACTTATACAAATACATTTACAATTAATTAGAAAGAACAAATGCAAGA
GTGATTACAACTTTCAAGAAAAGAAAATGAAAAAAAAAATGAATAATTGA
GTCATACTGCAAGTGGAATTTCCAGATCACGTGGAGAGGAAAAAAACATC
TGCACCCACCCCATGCAGAATGAGGACACCAGAAGTAGGTAAATTAACCG
AGAATTCCATCAAGACTAATCAAATACTTGGAGAGGGGGTTCAAGCGGAT
AGCACGAAGCACTGCATCTTCATTTTTCATAAATCTGCACAAAGAATGAA
TAAATAAAATGGAGAAGCCGAACTGTTGCAGACTTTTAGTCACCTTTTCA
CTGCTGGCATCATCCAAAATATTCTACAAACTGCATTAACATGGATGCAA
ACTCAAATATGTCTTCATTGTCGCCGCAAAGTTTTCAATCTGAGTTGGAA
TCGTAAAAGTCACTTGGGCATGGGGTCATGACCTCAGATTCAAGAATCTG
GACCACTCTGTGCATGGTGGGTCGATCATCTGGGCTGGAAGATACACACT
GGGTGGCTACTGCAAGAAGGGCATCAAGACTTTCAGACTGAACCCCTTCA
CAATTTGGATCAATGATCTCTCGTTGCCTATCCTCCGATATTAGGAAATT
CAACCAACCAACAATATTGAGGCCTTTCTCAATAAAAGATGCATCAGTAG
GCCGCTTTCCACTTAAAACTTCAAGCACCAAGACCCCAAAGCTGTAAACA
TCAGTCTTTTCTGTAGCTCTACCACTTTGCATGTACTCTGGAGCCAAGTA
ACCAAATGTTCCTGCAACAATGGTTGTAATGTGAGATTCTTCATCTTCTA
AAAGTTTAGCAAG
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