CV884945

Overview
NameCV884945
Unique NameCV884945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.637e-16
Identity = 46/114 (40.35%), Postives = 68/114 (59.65%), Query Frame = -1
Query:  539 TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 877
            +T V GTFGY APEY  +G+   K+DVYSFGV++LE+L+G++P D        ++V W    +SED+ ++ +D    G    +++  L AVA  CV    D RP M  VV+ L+
Sbjct:  237 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWATPKLSEDKVKQCVDARLGGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQ 350          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.056e-16
Identity = 60/167 (35.93%), Postives = 91/167 (54.49%), Query Frame = -1
Query:  440 LAKLLED-EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQ----REIIDPNC--EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCPSDFYDSNSD*KLCGD--NEDIFEFASM 913
            L+KL+ D E++H+TT V GT GYL PEY  + + TEK+DVY FGV++LE+L+GK P     I++G  +V  +   + + R     +E++D          +  +  + VA QCV     +RPTM  VVQ LES +     +   DS +  +  GD    D FE+  +
Sbjct:  779 LSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSP-----IDRGSYVVKEVKKKMDKSRNLYDLQELLDTTIIQNSGNLKGFEKYVDVALQCVEPEGVNRPTMSEVVQELESILRLVGLNPNADSATYEEASGDPYGRDSFEYTGV 940          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.056e-16
Identity = 43/123 (34.96%), Postives = 76/123 (61.79%), Query Frame = -1
Query:  539 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP----NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 895
            + ESHI T   GT GYL PEY ++ + T+K+DVYSFGV++LE+++ K+  D +  E+ +N+V ++N ++ ++R  E IDP        +  +++  L  +A+ C++    +RP+M  V   +E
Sbjct:  522 NNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVMYINKMMDQERLTECIDPLLKKTANKIDMQTIQQLGNLASACLNERRQNRPSMKEVADEIE 644          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.056e-16
Identity = 45/119 (37.82%), Postives = 72/119 (60.50%), Query Frame = -1
Query:  542 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQ-REIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQIL 892
            ++SH++T V GT+GY APEY  +G+ T K+DVYSFGV+ LE+++G++  D+       N+V W   L ++ R+  ++ DP  +G   + +L   LAVA+ C+      RP +  VV  L
Sbjct:  242 DKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVTAL 360          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.056e-16
Identity = 47/118 (39.83%), Postives = 73/118 (61.86%), Query Frame = -1
Query:  539 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 889
            E+HI+T+VAGT GYL PEY Q+ R  EK+DVYSFG+++LE+++ +   D S      +I  W+ F ++     +I+DPN  G  +S S+  +L +A  C + S  +RP M +V   L+
Sbjct:  734 ETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVIDQS--RSKSHISQWVGFELTRGDITKIMDPNLNGDYESRSVWRVLELAMSCANPSSVNRPNMSQVANELK 849          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 6.056e-16
Identity = 46/134 (34.33%), Postives = 82/134 (61.19%), Query Frame = -1
Query:  542 LAKLLE---DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLI----SEDRQREIIDPNCEGV---QSESLDALLAVATQCVSSSPDDRPTMHRVVQIL 913
            LAK+L    D  +   T+ AG++GY+APEY  S +ATEK+DVYS G++++E+++GK PT+A F E+  ++V W+  ++      + + ++ID   + +   + E+   +L +A QC  S P +RP+  +  + L
Sbjct: 1100 LAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTEAMFDEE-TDMVRWVETVLDTPPGSEAREKLIDSELKSLLPCEEEAAYQVLEIALQCTKSYPQERPSSRQASEYL 1232          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.909e-16
Identity = 47/136 (34.56%), Postives = 77/136 (56.62%), Query Frame = -1
Query:  488 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQS-ESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCPSDFYDSNSD 892
            +++H+TT+VAGTFGY+ PEY  S + T K+DVYSFGV+++E+++G++P      E+G  +       + E+R  +IID   +     E + A+  +A +C++    +RP M  V   LE    +P   D    N D
Sbjct:  582 DQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGLATHFLEAMKENRVIDIIDIRIKDESKLEQVMAVAKLARKCLNRKGKNRPNMKEVSNELERIRSSPEDLDVRTENED 717          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.909e-16
Identity = 49/132 (37.12%), Postives = 77/132 (58.33%), Query Frame = -1
Query:  539 LAKLLEDEE---SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE----IIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 913
            LAK+++ +         +V GT GY+APEY  + +  EK+DVYSFGV+++E+++GK+P +  F E   +IV W+ + +S++  RE    +ID + E    E    +L +A  C   SP  RP M  VV +LE
Sbjct:  835 LAKIIQADSVQRDFSAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPLETDFGENN-DIVMWV-WSVSKETNREMMMKLIDTSIEDEYKEDALKVLTIALLCTDKSPQARPFMKSVVSMLE 964          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.909e-16
Identity = 47/128 (36.72%), Postives = 77/128 (60.16%), Query Frame = -1
Query:  539 LAKL-LEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLN-FLISEDRQREIIDPNCEGVQSESLDALLA-VATQCVSSSPDDRPTMHRVVQILE 913
            LAKL   DE+SH+TT + GT+GY APEYM +G    K+DV++FGV++LE+++G    +        ++V WL   L ++ R ++I+D   +G  +  +   +A +   C+   P +RP M  VV++LE
Sbjct:  239 LAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEVVEVLE 366          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.033e-15
Identity = 46/119 (38.66%), Postives = 66/119 (55.46%), Query Frame = -1
Query:  536 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILES 892
            +  H+TTIV GT GY+ PEY  S R TEK+DVYS G++ LE+L+G RP     I  G NIV  +N          +ID +      E +   + +A +C   +P+ RP M  +V+ LE+
Sbjct:  788 QRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRP-----ISHGRNIVREVNEACDAGMMMSVIDRSMGQYSEECVKRFMELAIRCCQDNPEARPWMLEIVRELEN 901          
The following BLAST results are available for this feature:
BLAST of CV884945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
Y2706_ARATH4.637e-1640.35Probable receptor-like protein kinase At2g47060 OS... [more]
Y5977_ARATH6.056e-1635.93Probable leucine-rich repeat receptor-like protein... [more]
WAKLQ_ARATH6.056e-1634.96Wall-associated receptor kinase-like 20 OS=Arabido... [more]
PBS1_ARATH6.056e-1637.82Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
PAM74_ARATH6.056e-1639.83Probable LRR receptor-like serine/threonine-protei... [more]
GSO2_ARATH6.056e-1634.33LRR receptor-like serine/threonine-protein kinase ... [more]
WAKLA_ARATH7.909e-1634.56Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
IKU2_ARATH7.909e-1637.12Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
CX32_ARATH7.909e-1636.72Probable serine/threonine-protein kinase Cx32, chl... [more]
Y5374_ARATH1.033e-1538.66Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011E08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884945 ID=CV884945; Name=CV884945; organism=Citrus sinensis; type=EST; length=913bp
ATTTTACAAAATGGCATAAATCAGACCATCTTTTTCAGAGGCCAAACTTT
TGAACTTATACAAATACATTTACAATTAATTAGAAAGAACAAATGCAAGA
GTGATTACAACTTTCAAGAAAAGAAAATGAAAAAAAAAATGAATAATTGA
GTCATACTGCAAGTGGAATTTCCAGATCACGTGGAGAGGAAAAAAACATC
TGCACCCACCCCATGCAGAATGAGGACACCAGAAGTAGGTAAATTAACCG
AGAATTCCATCAAGACTAATCAAATACTTGGAGAGGGGGTTCAAGCGGAT
AGCACGAAGCACTGCATCTTCATTTTTCATAAATCTGCACAAAGAATGAA
TAAATAAAATGGAGAAGCCGAACTGTTGCAGACTTTTAGTCACCTTTTCA
CTGCTGGCATCATCCAAAATATTCTACAAACTGCATTAACATGGATGCAA
ACTCAAATATGTCTTCATTGTCGCCGCAAAGTTTTCAATCTGAGTTGGAA
TCGTAAAAGTCACTTGGGCATGGGGTCATGACCTCAGATTCAAGAATCTG
GACCACTCTGTGCATGGTGGGTCGATCATCTGGGCTGGAAGATACACACT
GGGTGGCTACTGCAAGAAGGGCATCAAGACTTTCAGACTGAACCCCTTCA
CAATTTGGATCAATGATCTCTCGTTGCCTATCCTCCGATATTAGGAAATT
CAACCAACCAACAATATTGAGGCCTTTCTCAATAAAAGATGCATCAGTAG
GCCGCTTTCCACTTAAAACTTCAAGCACCAAGACCCCAAAGCTGTAAACA
TCAGTCTTTTCTGTAGCTCTACCACTTTGCATGTACTCTGGAGCCAAGTA
ACCAAATGTTCCTGCAACAATGGTTGTAATGTGAGATTCTTCATCTTCTA
AAAGTTTAGCAAG
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