CV884945

Overview
NameCV884945
Unique NameCV884945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV884945_ssr701 microsatellite CV884945_ssr701:701..712. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig3378 contig Csv1_Contig3378:526..1440. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.033e-15
Identity = 48/131 (36.64%), Postives = 76/131 (58.02%), Query Frame = -1
Query:  524 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 913
            LAK   +  +H++T VAGT GY+APEY   G+ TEK+DVYSFGV++LE+LS ++        + +++  W   L+ E +  ++++    E    E L+  + +A  C       RPTM +VV++LES   T
Sbjct:  433 LAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEGQPVSVADWAWSLVREGQTLDVVEDGMPEKGPPEVLEKYVLIAVLCSHPQLHARPTMDQVVKMLESNEFT 563          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.033e-15
Identity = 48/136 (35.29%), Postives = 77/136 (56.62%), Query Frame = -1
Query:  503 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL-NIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESE---VMTPCPSDFY 895
            D+    T  V GT+GY+APEY   G+ + K+DVYSFGVLVLE++SG + +    ++  + N+V +   L S     E++DP+  +  Q+  +   + +A  CV    +DRPTM  +VQ+L +    +  P P  F+
Sbjct:  497 DQTEANTRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSGMKNSSLDQMDGSISNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDANDRPTMSAIVQMLTTSSIALAVPRPPGFF 632          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.033e-15
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = -1
Query:  539 HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 883
            H+TT+V G+FGYL PEY +  + TEK+DVYSFGV++ E+L  +   + S  ++ +++  W      +    +IIDPN +G + +E L      A +C++ S  +RPTM  V+  LE
Sbjct:  673 HVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEILCARPALNPSLPKEQVSLGDWAMNCKRKGNLEDIIDPNLKGKINAECLKKFADTAEKCLNDSGLERPTMGDVLWNLE 788          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.349e-15
Identity = 49/138 (35.51%), Postives = 79/138 (57.25%), Query Frame = -1
Query:  488 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAV---ATQCVSSSPDDRPTMHRVVQILESEVMTPCPSDFYDSNSD 892
            +++H+TT+VAGTFGY+ PEY  S + T+K+DVYSFGV+++E+++G++P      E+G  +       + E+R  +IID   +  +   LD L+AV   A +C+S     RP M      LE    +P   + +  N D
Sbjct:  585 DQTHLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRIRSEEGRGLATHFLEAMKENRVIDIIDIRIK--EESKLDQLMAVAKLARKCLSRKGIKRPNMREASLELERIRSSPEDLEAHIENDD 720          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.349e-15
Identity = 49/128 (38.28%), Postives = 70/128 (54.69%), Query Frame = -1
Query:  524 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFI---EKGLNIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 895
            D+    T  +AGTFGY++PEY   G  + K+DVYSFGVLVLE++SGK+  ++SF    + G N+V     L       E++DP   E  QS      + +A  CV   P DRP +  ++ +L S   T
Sbjct:  498 DQSQANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEIISGKK--NSSFYNIDDSGSNLVTHAWRLWRNGSPLELVDPTIGESYQSSEATRCIHIALLCVQEDPADRPLLPAIIMMLTSSTTT 623          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.349e-15
Identity = 46/129 (35.66%), Postives = 73/129 (56.59%), Query Frame = -1
Query:  515 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN-CEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT-PCP 895
            D+    T+ + GT+GY++PEY   G+ + K+DVYSFGVLVLE++SGK+ +     +   ++V +   L S  R  E++DP   E  Q   +   + +   CV   P +RPT+  +V +L S  +T P P
Sbjct:  490 DQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISGKKNSSFYQTDGAHDLVSYAWGLWSNGRPLELVDPAIVENCQRNEVVRCVHIGLLCVQEDPAERPTLSTIVLMLTSNTVTLPVP 618          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.762e-15
Identity = 47/130 (36.15%), Postives = 76/130 (58.46%), Query Frame = -1
Query:  536 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP----NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILES 913
            L++L   + SH+TT   GT GYL PEY  + + T+K+DVYSFGV++ E+L+ K+  D +  E+ +N+V ++   + E R  ++IDP         + ES+ AL  +A  CV  +   RPTM    + +E+
Sbjct:  505 LSRLGVSDVSHVTTCAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVLFELLTCKKAIDFNREEEDVNLVVFVRKALKEGRLMDVIDPVIGIGATEKEIESMKALGVLAELCVKETRQCRPTMQVAAKEIEN 634          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.762e-15
Identity = 58/167 (34.73%), Postives = 89/167 (53.29%), Query Frame = -1
Query:  440 LAKLLEDEES---HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE---GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT-PCPSD--FYDSNSD*KLCGDNEDIFEFASM 913
            +AKL + +++     T+ VAGT+GY+APEY  SG  + KTDV+SFGVLVLE++ GK+   +   +  L ++ ++     E     I+DP+     GV  E +   + +   CV  + + RPTM  VV +L +   T P PS   FY  + +  L  D   I   AS+
Sbjct:  490 MAKLFDTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEIIKGKKNNWSPEEDSSLFLLSYVWKSWREGEVLNIVDPSLVETIGVSDEIMKC-IHIGLLCVQENAESRPTMASVVVMLNANSFTLPRPSQPAFYSGDGE-SLSRDKNQINHIASL 654          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.762e-15
Identity = 51/140 (36.43%), Postives = 79/140 (56.43%), Query Frame = -1
Query:  512 LAKLLEDEES---HITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTD--ASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT-PCPS 913
            LAKL + +++     T+ +AGT+GY+APEY   G+ + KTDV+SFGVLV+E+++GK   +  ++  E+  N++ W+     ED    +IDP+        +   + +   CV  SP  RPTM  V  +L S   T P PS
Sbjct:  507 LAKLYDTDQTSTHRFTSKIAGTYGYMAPEYAIYGQFSVKTDVFSFGVLVIEIITGKGNNNGRSNDDEEAENLLSWVWRCWREDIILSVIDPSLTTGSRSEILRCIHIGLLCVQESPASRPTMDSVALMLNSYSYTLPTPS 646          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.301e-15
Identity = 44/118 (37.29%), Postives = 72/118 (61.02%), Query Frame = -1
Query:  539 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 889
            E+H++T VAGT GYL PEY ++ R  EK+DVYSFG+++LE+++  RP      EK  +I  W+ +++++     ++DP      +  S+   L +A  CV+ S + RPTM +V   L+
Sbjct:  728 ETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIIT-SRPVIQQTREKP-HIAAWVGYMLTKGDIENVVDPRLNRDYEPTSVWKALEIAMSCVNPSSEKRPTMSQVTNELK 843          
The following BLAST results are available for this feature:
BLAST of CV884945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
RKF3_ARATH1.033e-1536.64Probable LRR receptor-like serine/threonine-protei... [more]
CRK20_ARATH1.033e-1535.29Putative cysteine-rich receptor-like protein kinas... [more]
ANX1_ARATH1.033e-1537.93Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
WAKLE_ARATH1.349e-1535.51Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
CRK35_ARATH1.349e-1538.28Putative cysteine-rich receptor-like protein kinas... [more]
CRK10_ARATH1.349e-1535.66Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
WAKLP_ARATH1.762e-1536.15Wall-associated receptor kinase-like 15 OS=Arabido... [more]
CRK41_ARATH1.762e-1534.73Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK28_ARATH1.762e-1536.43Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
Y2289_ARATH2.301e-1537.29Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011E08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884945 ID=CV884945; Name=CV884945; organism=Citrus sinensis; type=EST; length=913bp
ATTTTACAAAATGGCATAAATCAGACCATCTTTTTCAGAGGCCAAACTTT
TGAACTTATACAAATACATTTACAATTAATTAGAAAGAACAAATGCAAGA
GTGATTACAACTTTCAAGAAAAGAAAATGAAAAAAAAAATGAATAATTGA
GTCATACTGCAAGTGGAATTTCCAGATCACGTGGAGAGGAAAAAAACATC
TGCACCCACCCCATGCAGAATGAGGACACCAGAAGTAGGTAAATTAACCG
AGAATTCCATCAAGACTAATCAAATACTTGGAGAGGGGGTTCAAGCGGAT
AGCACGAAGCACTGCATCTTCATTTTTCATAAATCTGCACAAAGAATGAA
TAAATAAAATGGAGAAGCCGAACTGTTGCAGACTTTTAGTCACCTTTTCA
CTGCTGGCATCATCCAAAATATTCTACAAACTGCATTAACATGGATGCAA
ACTCAAATATGTCTTCATTGTCGCCGCAAAGTTTTCAATCTGAGTTGGAA
TCGTAAAAGTCACTTGGGCATGGGGTCATGACCTCAGATTCAAGAATCTG
GACCACTCTGTGCATGGTGGGTCGATCATCTGGGCTGGAAGATACACACT
GGGTGGCTACTGCAAGAAGGGCATCAAGACTTTCAGACTGAACCCCTTCA
CAATTTGGATCAATGATCTCTCGTTGCCTATCCTCCGATATTAGGAAATT
CAACCAACCAACAATATTGAGGCCTTTCTCAATAAAAGATGCATCAGTAG
GCCGCTTTCCACTTAAAACTTCAAGCACCAAGACCCCAAAGCTGTAAACA
TCAGTCTTTTCTGTAGCTCTACCACTTTGCATGTACTCTGGAGCCAAGTA
ACCAAATGTTCCTGCAACAATGGTTGTAATGTGAGATTCTTCATCTTCTA
AAAGTTTAGCAAG
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