CV884945

Overview
NameCV884945
Unique NameCV884945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.301e-15
Identity = 44/114 (38.60%), Postives = 70/114 (61.40%), Query Frame = -1
Query:  554 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRV 892
            +++H+TTIV GT GY+ PEY+QS   T K+DVYSFGVL++E+L+G++P      ++   +  +    +  DR  EI+D    E    E + A+  +A +C+S + + RPTM  V
Sbjct:  543 DDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPVSLLRRQEVRMLGAYFLEAMRNDRLHEILDARIKEECDREEVLAVAKLARRCLSLNSEHRPTMRDV 656          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.301e-15
Identity = 49/136 (36.03%), Postives = 84/136 (61.76%), Query Frame = -1
Query:  497 EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSE-SLDALLAVAT---QCVSSSPDDRPTMHRVVQILESEVMTPCPSDFYDS 892
            +++H+TT VAGTFGY+ PEY QS + TEK+DVYSFGV+++E+L+G++P+     E+   +       + E+R  +I+D   + ++ E ++D +++VA    +C++     RP M  V   +E E++    S  YDS
Sbjct:  569 DQTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEENRGLAAHFVEAVKENRVLDIVD---DRIKDECNMDQVMSVANLARRCLNRKGKKRPNMREV--SIELEMIR---SSHYDS 696          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.301e-15
Identity = 43/120 (35.83%), Postives = 73/120 (60.83%), Query Frame = -1
Query:  512 VAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQIL-ESEVMTPCPS 868
            +AG+ GY+APEY+ + R  EK+D+YSFGV++LE+++GK+PTD+   +K  ++  W+   + +     +IDP  +    E +  ++ +   C S  P +RP+M +VV +L E     PC S
Sbjct:  858 IAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTDSELGDK--DMAKWVCTALDKCGLEPVIDPKLDLKFKEEISKVIHIGLLCTSPLPLNRPSMRKVVIMLQEVSGAVPCSS 975          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.301e-15
Identity = 51/132 (38.64%), Postives = 79/132 (59.85%), Query Frame = -1
Query:  494 VAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIE-KGL--NIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT---PCPSDFYDSN 868
            V GTFGY++PEY+  G+ + K+DVYSFGVL+LE++SGK+  ++SF +  GL  N+V ++  L       E++DP   +   SE +   + +   CV  +P DRPTM  + Q+L +  +T   P P  F+  N
Sbjct:  501 VVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKK--NSSFYQMDGLVNNLVTYVWKLWENKSLHELLDPFINQDFTSEEVIRYIHIGLLCVQENPADRPTMSTIHQMLTNSSITLPVPLPPGFFFRN 630          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.301e-15
Identity = 47/130 (36.15%), Postives = 77/130 (59.23%), Query Frame = -1
Query:  515 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL-NIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT-PCP 895
            D+    T  V GTFGY+ PEY+ +G+ + K+DVYSFGVL+LE++ GK+ +    I+  + N+V ++  L + +   E++DP   E    + +   + ++  CV  +P DRPTM  V Q+L +  +T P P
Sbjct:  488 DQTEATTGRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEIIVGKKSSSFHEIDGSVGNLVTYVWRLWNNESFLELVDPAMGESYDKDEVIRCIHISLLCVQENPADRPTMSTVFQMLTNTFLTLPVP 617          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.005e-15
Identity = 47/114 (41.23%), Postives = 72/114 (63.16%), Query Frame = -1
Query:  542 VAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQ-REIIDPNCEG----VQSESLDALLAVATQCVSSSPDDRPTMHRVVQIL 868
            +AG++GY+APE+    R TEK+DVYS+GV++LEVL+GK P D   +  G ++V W+   ++E +    ++DP  +G    +  E L   LAVA  CVS+  ++RP M  VV +L
Sbjct:  927 MAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGKHPLDPD-LPGGAHLVKWVRDHLAEKKDPSRLLDPRLDGRTDSIMHEMLQT-LAVAFLCVSNKANERPLMKDVVAML 1038          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.005e-15
Identity = 51/134 (38.06%), Postives = 77/134 (57.46%), Query Frame = -1
Query:  515 AKLLEDEESHITTI-VAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV-MTPCP 910
            A+L + +E+   T  +AGT GY+APEY+  G+ + K+DVYSFGV++LE++SG+R  + SF  +GL    W  ++  E +   IIDP         +  L+ +   CV  +P  RPTM  V+  L SE  + P P
Sbjct:  500 ARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGER--NNSFEGEGLAAFAWKRWV--EGKPEIIIDPFLIEKPRNEIIKLIQIGLLCVQENPTKRPTMSSVIIWLGSETNIIPLP 629          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.925e-15
Identity = 48/157 (30.57%), Postives = 84/157 (53.50%), Query Frame = -1
Query:  428 TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEK---GLNIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT-PCP--SDFYDSNSD*KLCGDNEDIFEFASMLMQF 877
            T  +AGT+ Y++PEY   G+ + K+D+YSFGVLVLE++SGK+ +    +++     N+V + + L       E++DP      QS  +   + +A  CV  +P+DRP +  ++ +L S  +T P P    F+  +   KL  +  +  ++ S    F
Sbjct:  509 TNRIAGTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIISGKKNSGVYQMDETSTAGNLVTYASRLWRNKSPLELVDPTFGRNYQSNEVTRCIHIALLCVQENPEDRPMLSTIILMLTSNTITLPVPRLPGFFPRSRQLKLVSEGSESDQYTSKSSSF 665          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.126e-15
Identity = 44/116 (37.93%), Postives = 73/116 (62.93%), Query Frame = -1
Query:  551 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVV 895
            D ESH++T+VAGT GYL PEY ++   +EK+DVYSFGV++LE+++ +  TD +   +  +I  W+  ++++   + I+DP   G   +     ++ +A  CV+ S + RPTM  VV
Sbjct:  718 DGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKT--RERTHINEWVGSMLTKGDIKSILDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVV 831          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.126e-15
Identity = 46/123 (37.40%), Postives = 74/123 (60.16%), Query Frame = -1
Query:  524 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT 889
            E+H++T VAG+ GYL PEY ++   TEK+DV+SFGV++LE+++ +   D +   +  +I  W+ F ++    + I+DP+  G   S SL   L +A  CVS S   RP M +V   L+  ++T
Sbjct:  746 ETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQT--REKSHIGEWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVANELQECLLT 866          
The following BLAST results are available for this feature:
BLAST of CV884945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
WAKLG_ARATH2.301e-1538.60Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
WAKLB_ARATH2.301e-1536.03Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
RLK5_ARATH2.301e-1535.83Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
CRK18_ARATH2.301e-1538.64Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
CRK16_ARATH2.301e-1536.15Putative cysteine-rich receptor-like protein kinas... [more]
Y4265_ARATH3.005e-1541.23Probable LRR receptor-like serine/threonine-protei... [more]
CRK39_ARATH3.005e-1538.06Putative cysteine-rich receptor-like protein kinas... [more]
CRK11_ARATH3.925e-1530.57Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
Y5188_ARATH5.126e-1537.93Probable LRR receptor-like serine/threonine-protei... [more]
Y4245_ARATH5.126e-1537.40Probable LRR receptor-like serine/threonine-protei... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_011E08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884945 ID=CV884945; Name=CV884945; organism=Citrus sinensis; type=EST; length=913bp
ATTTTACAAAATGGCATAAATCAGACCATCTTTTTCAGAGGCCAAACTTT
TGAACTTATACAAATACATTTACAATTAATTAGAAAGAACAAATGCAAGA
GTGATTACAACTTTCAAGAAAAGAAAATGAAAAAAAAAATGAATAATTGA
GTCATACTGCAAGTGGAATTTCCAGATCACGTGGAGAGGAAAAAAACATC
TGCACCCACCCCATGCAGAATGAGGACACCAGAAGTAGGTAAATTAACCG
AGAATTCCATCAAGACTAATCAAATACTTGGAGAGGGGGTTCAAGCGGAT
AGCACGAAGCACTGCATCTTCATTTTTCATAAATCTGCACAAAGAATGAA
TAAATAAAATGGAGAAGCCGAACTGTTGCAGACTTTTAGTCACCTTTTCA
CTGCTGGCATCATCCAAAATATTCTACAAACTGCATTAACATGGATGCAA
ACTCAAATATGTCTTCATTGTCGCCGCAAAGTTTTCAATCTGAGTTGGAA
TCGTAAAAGTCACTTGGGCATGGGGTCATGACCTCAGATTCAAGAATCTG
GACCACTCTGTGCATGGTGGGTCGATCATCTGGGCTGGAAGATACACACT
GGGTGGCTACTGCAAGAAGGGCATCAAGACTTTCAGACTGAACCCCTTCA
CAATTTGGATCAATGATCTCTCGTTGCCTATCCTCCGATATTAGGAAATT
CAACCAACCAACAATATTGAGGCCTTTCTCAATAAAAGATGCATCAGTAG
GCCGCTTTCCACTTAAAACTTCAAGCACCAAGACCCCAAAGCTGTAAACA
TCAGTCTTTTCTGTAGCTCTACCACTTTGCATGTACTCTGGAGCCAAGTA
ACCAAATGTTCCTGCAACAATGGTTGTAATGTGAGATTCTTCATCTTCTA
AAAGTTTAGCAAG
back to top