CV884945

Overview
NameCV884945
Unique NameCV884945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV884945_ssr701 microsatellite CV884945_ssr701:701..712. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig3378 contig Csv1_Contig3378:526..1440. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y3868_ARATH (Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.126e-15
Identity = 44/119 (36.97%), Postives = 71/119 (59.66%), Query Frame = -1
Query:  539 SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQ---SESLDALLAVATQCVSSSPDDRPTMHRVVQILE 886
            SH T I + + GY APE +++ + T+K+DVYSFGVL+LE+L+GK     +  E+ +++  W+  ++ E+   E+ D      Q    E +  +L +A  CVS  PD RP+M  VV ++E
Sbjct:  494 SHHTLIPSRSLGYRAPEAIETRKHTQKSDVYSFGVLLLEMLTGKAAGKTTGHEEVVDLPKWVQSVVREEWTGEVFDVELIKQQHNVEEEMVQMLQIAMACVSKHPDSRPSMEEVVNMME 612          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.126e-15
Identity = 38/108 (35.19%), Postives = 64/108 (59.26%), Query Frame = -1
Query:  539 GYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQ---SESLDALLAVATQCVSSSPDDRPTMHRVVQILE 853
            GY APE   + + ++K DVYSFGVL+LE+L+GK PT     E+G+++  W+  +  +    +++DP     Q   +E++  LL +   C +  PD RP+M  V +++E
Sbjct:  506 GYRAPEITDARKISQKADVYSFGVLILELLTGKSPTHQQLNEEGVDLPRWVQSVTEQQTPSDVLDPELTRYQPEGNENIIRLLKIGMSCTAQFPDSRPSMAEVTRLIE 613          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.126e-15
Identity = 50/141 (35.46%), Postives = 79/141 (56.03%), Query Frame = -1
Query:  494 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFI---EKGLNIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT---PCPSDFYDSN 895
            D+    T  V GTFGY+ PEY+  G+ + K+DVYSFGVL+LE++ GK+  ++SF    + G N+V  +  L + D   ++IDP   E   ++ +   + +   CV  +P DRP M  + Q+L +  +T   P P  F+  N
Sbjct:  492 DQTEDQTGRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKK--NSSFFQMDDSGGNLVTHVWRLWNNDSPLDLIDPAIKESYDNDEVIRCIHIGILCVQETPADRPEMSTIFQMLTNSSITLPVPRPPGFFFRN 630          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.695e-15
Identity = 45/118 (38.14%), Postives = 75/118 (63.56%), Query Frame = -1
Query:  551 LEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVV 901
            L + E+H++T+VAGT GYL PEY ++   TEK+DVYSFG+L+LE+++ +   D S   +  +I  W+  ++++   + I+DP+  E   S S+   + +A  C++ S   RPTM +VV
Sbjct:  729 LIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQS--REKPHIGEWVGVMLTKGDIQSIMDPSLNEDYDSGSVWKAVELAMSCLNHSSARRPTMSQVV 844          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.695e-15
Identity = 44/119 (36.97%), Postives = 72/119 (60.50%), Query Frame = -1
Query:  542 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQIL 895
            D E H++T+VAGT GYL PEY ++   +EK+DVYSFGV++LE+++ +   D +     +N   W+ F++++   + I+DP   G   +     ++ +A  CV+ S + RPTM  VV  L
Sbjct:  736 DGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVIDKTRERPHIN--DWVGFMLTKGDIKSIVDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVMEL 852          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.695e-15
Identity = 49/137 (35.77%), Postives = 81/137 (59.12%), Query Frame = -1
Query:  521 LAKLLEDEESHITTI--VAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISE-DRQREIIDPNCEGVQSESLDAL---LAVATQCVSSSPDDRPTMHRVVQILESEVMTP 913
            LAKL+ +  ++   +  VAG++GY+APEY  +   TEK+DVYS+GV++LE+LSG+   +   I  GL+IV W+   +   +    ++D   +G+  + +  +   L +A  CV+ SP +RPTM  VV +L     +P
Sbjct:  921 LAKLMMNSPNYHNAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVEPQ-IGDGLHIVEWVKKKMGTFEPALSVLDVKLQGLPDQIVQEMLQTLGIAMFCVNPSPVERPTMKEVVTLLMEVKCSP 1056          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.695e-15
Identity = 51/142 (35.92%), Postives = 84/142 (59.15%), Query Frame = -1
Query:  512 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP-------NCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQIL-ESEVMTPCPS 913
            LA+    +++H++T +AGT GY+APEY+  G+ TEK DVYSFGVLVLE+  G R    +F+ +  +++  +  L + +R  E +DP         +G ++E+   +L V   C  +SP  RP+M  V+++L E +   P P+
Sbjct:  461 LARCFGLDKTHLSTGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACGTRIN--AFVPETGHLLQRVWNLYTLNRLVEALDPCLKDEFLQVQGSEAEAC-KVLRVGLLCTQASPSLRPSMEEVIRMLTERDYPIPSPT 599          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.695e-15
Identity = 50/141 (35.46%), Postives = 79/141 (56.03%), Query Frame = -1
Query:  494 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFI---EKGLNIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMT---PCPSDFYDSN 895
            D+    T  V GTFGY+ PEY+  G+ + K+DVYSFGVL+LE++ GK+  ++SF    + G N+V  +  L + D   ++IDP   E   ++ +   + +   CV  +P DRP M  + Q+L +  +T   P P  F+  N
Sbjct:  482 DQTEDNTRRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKK--NSSFYKIDDSGGNLVTHVWRLWNNDSPLDLIDPAIEESCDNDKVIRCIHIGLLCVQETPVDRPEMSTIFQMLTNSSITLPVPRPPGFFFRN 620          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.695e-15
Identity = 50/120 (41.67%), Postives = 71/120 (59.17%), Query Frame = -1
Query:  539 DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCE-GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 895
            D  S +  + AGT GYL PEY +    T K+DVYSFGVL+LE+LSG++  D  + E+G NIV W   LI       ++DP  +   + E+L  +++VA +CV     DRP+M +V   LE
Sbjct:  669 DSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMHY-EEG-NIVEWAVPLIKAGDINALLDPVLKHPSEIEALKRIVSVACKCVRMRGKDRPSMDKVTTALE 786          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.744e-15
Identity = 47/146 (32.19%), Postives = 83/146 (56.85%), Query Frame = -1
Query:  491 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLD-----ALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCPSDFYDSNS 913
            +AK L   +SH +T V GT GY+ PEY ++ R TEK+DVYS+G+++LE+L+ ++  D    E  L+     + ++S+    E+++     + S   D      +  +A  C    P+DRPTMH+V ++L S +++  P    D+++
Sbjct:  794 IAKSLCVSKSHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTRRKAVDD---ESNLH-----HLIMSKTGNNEVMEMADPDITSTCKDLGVVKKVFQLALLCTKRQPNDRPTMHQVTRVLGSFMLSEQPPAATDTSA 931          
The following BLAST results are available for this feature:
BLAST of CV884945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
Y3868_ARATH5.126e-1536.97Probable inactive receptor kinase At3g08680 OS=Ara... [more]
Y3288_ARATH5.126e-1535.19Probable inactive receptor kinase At3g02880 OS=Ara... [more]
CRK31_ARATH5.126e-1535.46Putative cysteine-rich receptor-like protein kinas... [more]
Y5182_ARATH6.695e-1538.14Probable LRR receptor-like serine/threonine-protei... [more]
Y1518_ARATH6.695e-1536.97Probable LRR receptor-like serine/threonine-protei... [more]
Y1341_ARATH6.695e-1535.77Probable LRR receptor-like serine/threonine-protei... [more]
CRK42_ARATH6.695e-1535.92Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
CRK32_ARATH6.695e-1535.46Putative cysteine-rich receptor-like protein kinas... [more]
ACR4_ARATH6.695e-1541.67Serine/threonine-protein kinase-like protein ACR4 ... [more]
ERECT_ARATH8.744e-1532.19LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011E08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884945 ID=CV884945; Name=CV884945; organism=Citrus sinensis; type=EST; length=913bp
ATTTTACAAAATGGCATAAATCAGACCATCTTTTTCAGAGGCCAAACTTT
TGAACTTATACAAATACATTTACAATTAATTAGAAAGAACAAATGCAAGA
GTGATTACAACTTTCAAGAAAAGAAAATGAAAAAAAAAATGAATAATTGA
GTCATACTGCAAGTGGAATTTCCAGATCACGTGGAGAGGAAAAAAACATC
TGCACCCACCCCATGCAGAATGAGGACACCAGAAGTAGGTAAATTAACCG
AGAATTCCATCAAGACTAATCAAATACTTGGAGAGGGGGTTCAAGCGGAT
AGCACGAAGCACTGCATCTTCATTTTTCATAAATCTGCACAAAGAATGAA
TAAATAAAATGGAGAAGCCGAACTGTTGCAGACTTTTAGTCACCTTTTCA
CTGCTGGCATCATCCAAAATATTCTACAAACTGCATTAACATGGATGCAA
ACTCAAATATGTCTTCATTGTCGCCGCAAAGTTTTCAATCTGAGTTGGAA
TCGTAAAAGTCACTTGGGCATGGGGTCATGACCTCAGATTCAAGAATCTG
GACCACTCTGTGCATGGTGGGTCGATCATCTGGGCTGGAAGATACACACT
GGGTGGCTACTGCAAGAAGGGCATCAAGACTTTCAGACTGAACCCCTTCA
CAATTTGGATCAATGATCTCTCGTTGCCTATCCTCCGATATTAGGAAATT
CAACCAACCAACAATATTGAGGCCTTTCTCAATAAAAGATGCATCAGTAG
GCCGCTTTCCACTTAAAACTTCAAGCACCAAGACCCCAAAGCTGTAAACA
TCAGTCTTTTCTGTAGCTCTACCACTTTGCATGTACTCTGGAGCCAAGTA
ACCAAATGTTCCTGCAACAATGGTTGTAATGTGAGATTCTTCATCTTCTA
AAAGTTTAGCAAG
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