CV884944

Overview
NameCV884944
Unique NameCV884944
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.016e-44
Identity = 96/243 (39.51%), Postives = 145/243 (59.67%), Query Frame = 1
Query:   58 YSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQ--LDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIID 780
            +SS D+    +  +   I+G GG GTVYK  ++DG + A+K+   L E     F  E+ +L  I HR +V + G C      +L+Y+F+P  +L + LH  SE   + W+ RL I    A  L+YLH   S  I HRD+KS+NILLD    A+VSDFG+++ +  +++H+TTIV GT GY+ PEY+QS   T K+DVYSFGVL++E+L+G++P      ++   +  +    +  DR  EI+D
Sbjct:  378 FSSNDLENATDRFNASRILGQGGQGTVYKGMLEDGMIVAVKKSKALKEENLEEFINEIILLSQINHRNVVKILGCCLETEVPILVYEFIPNRNLFDHLHNPSEDFPMSWEVRLCIACEVADALSYLHSAVSIPIYHRDVKSTNILLDEKHRAKVSDFGISRSVAIDDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPVSLLRRQEVRMLGAYFLEAMRNDRLHEILD 620          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.016e-44
Identity = 98/242 (40.50%), Postives = 150/242 (61.98%), Query Frame = 1
Query:   97 DDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL-LEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG-VQSESL 813
            D+   IG GGFG VYK  ++DG   A+KR +  ++     F  E+E+L   +HR+LV+L GYC+     +LIY+++  G++   L+      L W  RL I +GAA+GL YLH   S  +IHRD+KS+NILLD N  A+V+DFGL+K   E +++H++T V G+FGYL PEY +  + T+K+DVYSFGV++ EVL  +   D +   + +N+  W      + +  +IID +  G ++ +SL
Sbjct:  486 DESRNIGVGGFGKVYKGELNDGTKVAVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYGSGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAMKWQKKGQLDQIIDQSLRGNIRPDSL 727          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.016e-44
Identity = 99/251 (39.44%), Postives = 148/251 (58.96%), Query Frame = 1
Query:   46 GDLPYSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERS--EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL-EDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL-NIVGWLNFLISEDRQREIIDPN 786
            G L +  K I+         + +G GGFG VYK     G   A+KR+ K +   +R FE E+ ++  ++HR LV L GYC     K+L+Y+F+   SLD  L + +   QLDW  R  II G A+G+ YLH D    IIHRD+K+ NILLD ++  +V+DFG+A++   D+    T  V GT+GY+APEY   G+ + K+DVYSFGVLV E++SG + +    ++  + N+V +   L S   Q +++DP+
Sbjct:  492 GSLQFDFKAIVAATNNFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKTSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFDTTMKRQLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGQFSMKSDVYSFGVLVFEIISGMKNSSLYQMDDSVSNLVTYTWRLWSNGSQLDLVDPS 742          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 2.016e-44
Identity = 95/250 (38.00%), Postives = 151/250 (60.40%), Query Frame = 1
Query:   46 GDLPYSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEAL--HERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITT-IVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL-NIVGWLNFLISEDRQREIIDP 783
            G L +  K I          + +G GGFG V+K    +G   A+KR+ K++   +  F+ E+ ++  ++HR LV L G+      K+L+Y+++P  SLD  L  H R  QLDW  R NII G  +G+ YLH D    IIHRD+K+ NILLD ++  +++DFG+A+    +++  TT  V GTFGY+ PEY+ +G+ + K+DVYSFGVL+LE++ GK+ +    I+  + N+V ++  L + +   E++DP
Sbjct:  319 GSLQFDFKAIEAATNNFQKSNKLGHGGFGEVFKGTFPNGTEVAVKRLSKISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLFDHRRRGQLDWRTRYNIIRGVTRGILYLHQDSRLTIIHRDLKAGNILLDVDMNPKIADFGVARNFRVDQTEATTGRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEIIVGKKSSSFHEIDGSVGNLVTYVWRLWNNESFLELVDP 568          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.634e-44
Identity = 99/256 (38.67%), Postives = 151/256 (58.98%), Query Frame = 1
Query:   52 LPYSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQL--DWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE-DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGW-----------LNFLISEDRQREII 777
            L +  + I+   +    ++ IG GGFG+VYK  +  G   A+KR+ + +   +  F  E+ +L  ++HR LV L G+CN    ++L+Y+F+P  SLD  + +  ++L   WD R  II G A+GL YLH D   RIIHRD+K+SNILLD  +  +V+DFG+A+L   D+   +T  V GTFGY+APEY+++   + KTDVYSFGV++LE+++G R     F   GL    W           ++ ++S  R  EI+
Sbjct:  325 LRFDFRMILTATDDFSFENKIGQGGFGSVYKGKLPGGEEIAVKRLTRGSGQGEIEFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEEKRLLLTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLLEMITG-RSNKNYFEALGLPAYAWKCWVAGEAASIIDHVLSRSRSNEIM 579          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 3.439e-44
Identity = 105/266 (39.47%), Postives = 159/266 (59.77%), Query Frame = 1
Query:   58 YSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDD----------GNVFALKRIDKLNEGFD--RFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERS---EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE-DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLN-FLISEDRQREIIDPNCEGVQS 804
            +S  ++         D ++G GGFG V+K  +D+          G V A+KR+++  EGF   R +  E+  LG + H  LV L GYC     +LL+Y+F+  GSL+  L  R    + L W+ R+ + +GAA+GLA+LH+   P++I+RD K+SNILLD N  A++SDFGLA+     + SH++T V GT GY APEY+ +G  + K+DVYSFGV++LE+LSG+R  D +      N+V W   +L ++ R   ++DP  +G  S
Sbjct:   56 FSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQ--EGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHN-AQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYS 318          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.492e-44
Identity = 98/241 (40.66%), Postives = 149/241 (61.83%), Query Frame = 1
Query:   73 IIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALH--ERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTI-VAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 783
            ++K  E     + +G GGFG VYK  + DG   A+KR+ K + +G D F   E+ ++  ++H  LV + G C     K+LIY++L   SLD  L    R  +L+W+ R +I  G A+GL YLH D   RIIHRD+K SNILLD N+  ++SDFG+A++ E +E+   T+ V GT+GY++PEY   G  +EK+DV+SFGV+VLE++SGK+      ++   +++ ++     E R  EI+DP
Sbjct:  521 VVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSKTSVQGTDEFMN-EVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGKKNRGFYNLDYENDLLSYVWSRWKEGRALEIVDP 760          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.492e-44
Identity = 105/251 (41.83%), Postives = 149/251 (59.36%), Query Frame = 1
Query:   58 YSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRI----DKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERS----EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL-LEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 783
            ++ +++ K  +   ++ I+G G F  VYK  + DG   A+KR     DK     +  F  EL++L  + H +L++L GYC     +LL+Y+F+  GSL   LH ++    EQLDW  R+ I + AA+G+ YLH    P +IHRDIKSSNIL+D    ARV+DFGL+ L   D  S +  + AGT GYL PEY +    T K+DVYSFGVL+LE+LSG++  D  + E+G NIV W   LI       ++DP
Sbjct:  500 FTYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNSNE--FRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMHY-EEG-NIVEWAVPLIKAGDINALLDP 746          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.867e-44
Identity = 101/241 (41.91%), Postives = 148/241 (61.41%), Query Frame = 1
Query:  103 DHIIGSGGFGTVYKLAMDD----------GNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERS---EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE-DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLN-FLISEDRQREIID 780
            D ++G GGFG V+K  +D+          G V A+K++++      + +  E+  LG   HR+LV L GYC     +LL+Y+F+P GSL+  L  R    + L W  RL + +GAAKGLA+LH     R+I+RD K+SNILLD    A++SDFGLAK     ++SH++T V GT GY APEY+ +G  T K+DVYSFGV++LE+LSG+R  D +      N+V W   +L+++ +   +ID
Sbjct:   71 DSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHSS-ETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVID 310          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.662e-44
Identity = 96/231 (41.56%), Postives = 149/231 (64.50%), Query Frame = 1
Query:  103 DHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQ--LDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE-DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 786
            D  +G GGFG VY   ++     A+K + + +    + F+ E+E+L  + H  LV+L GYC+      LIY+++P G L + L  +     L W++RL I++ AA GL YLH  C P ++HRDIK++NILLD +L+A+++DFGL++      E +++T+VAGT GYL PEY Q+   TEK+D+YSFG+++LE++S  RP      EK  +IV W++F+I++   R I+DPN
Sbjct:  580 DKALGEGGFGVVYHGFVNVIEQVAVKLLSQSSSQGYKHFKAEVELLMRVHHINLVSLVGYCDEGEHLALIYEYMPNGDLKQHLSGKHGGFVLSWESRLKIVLDAALGLEYLHTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKNVSTVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIIS-NRPIIQQSREKP-HIVEWVSFMITKGDLRSIMDPN 808          
The following BLAST results are available for this feature:
BLAST of CV884944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
WAKLG_ARATH2.016e-4439.51Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
HERK_ARATH2.016e-4440.50Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
CRK23_ARATH2.016e-4439.44Putative cysteine-rich receptor-like protein kinas... [more]
CRK16_ARATH2.016e-4438.00Putative cysteine-rich receptor-like protein kinas... [more]
CRK38_ARATH2.634e-4438.67Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
NAK_ARATH3.439e-4439.47Probable serine/threonine-protein kinase NAK OS=Ar... [more]
SRK6_BRAOE4.492e-4440.66Putative serine/threonine-protein kinase receptor ... [more]
ACR4_ARATH4.492e-4441.83Serine/threonine-protein kinase-like protein ACR4 ... [more]
APK1A_ARATH5.867e-4441.91Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y2899_ARATH7.662e-4441.56Probable leucine-rich repeat receptor-like protein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_011E08_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884944 ID=CV884944; Name=CV884944; organism=Citrus sinensis; type=EST; length=826bp
CTTGCAAGAGATGTTGGTGGAGGTGCATCAATTGTTATGTTTCATGGAGA
CTTGCCATATTCTTCAAAAGACATCATAAAAAAATTGGAAACTTTGGATG
ATGATCACATAATAGGATCTGGGGGCTTTGGAACTGTTTACAAATTAGCA
ATGGATGATGGAAACGTATTTGCTTTGAAAAGAATTGATAAGTTGAATGA
GGGCTTTGATCGGTTTTTTGAAAGGGAGCTTGAAATTCTTGGAAGCATAA
AACACCGGTATTTGGTGAATTTGCGAGGATACTGCAACTCACCTACATCA
AAATTGTTAATATATGACTTTCTACCTGGTGGCAGCCTTGATGAAGCTCT
TCATGAAAGATCTGAGCAGTTAGATTGGGATGCACGGTTAAATATTATAA
TGGGAGCAGCAAAAGGACTGGCCTATTTGCATCATGACTGTTCTCCTAGA
ATCATACACCGTGACATCAAATCCAGCAACATTTTGCTTGATGGAAATTT
GGAGGCTCGAGTATCTGATTTTGGACTTGCTAAACTTTTAGAAGATGAAG
AATCTCACATTACAACCATTGTTGCAGGAACATTTGGTTACTTGGCTCCA
GAGTACATGCAAAGTGGTAGAGCTACAGAAAAGACTGATGTTTACAGCTT
TGGGGTCTTGGTGCTTGAAGTTTTAAGTGGAAAGCGGCCTACTGATGCAT
CTTTTATTGAGAAAGGCCTCAATATTGTTGGTTGGTTGAATTTCCTAATA
TCGGAGGATAGGCAACGAGAGATCATTGATCCAAATTGTGAAGGGGTTCA
GTCTGAAAGTCTTGATGCCCTTCTTG
back to top