CV884944

Overview
NameCV884944
Unique NameCV884944
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.853e-52
Identity = 108/226 (47.79%), Postives = 143/226 (63.27%), Query Frame = 1
Query:  112 IGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQ--LDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 783
            +G G FG+VY   M DG   A+K     +   +R F  E+ +L  I HR LV L GYC     ++L+Y+++  GSL + LH  S+   LDW  RL I   AAKGL YLH  C+P IIHRD+KSSNILLD N+ A+VSDFGL++  E++ +H++++  GT GYL PEY  S + TEK+DVYSFGV++ E+LSGK+P  A      LNIV W   LI +     IIDP
Sbjct:  612 VGRGSFGSVYYGRMKDGKEVAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWARSLIRKGDVCGIIDP 837          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 9.984e-52
Identity = 105/242 (43.39%), Postives = 153/242 (63.22%), Query Frame = 1
Query:   52 LPYSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIE--KGLNIVGWLNFLISEDRQRE 771
            +P +  ++++     +  ++IG+GGFG  YK  +    V A+KR+        + F  E++ LG ++H  LV L GY  S T   L+Y++LPGG+L++ + ERS + DW     I +  A+ LAYLH  C PR++HRD+K SNILLD +  A +SDFGLA+LL   E+H TT VAGTFGY+APEY  + R ++K DVYS+GV++LE+LS K+  D SF+    G NIV W   L+ + R +E
Sbjct:  860 VPITFDNVVRATGNFNASNLIGNGGFGATYKAEISQDVVVAIKRLSIGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLVYNYLPGGNLEKFIQERSTR-DWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDCNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFVSYGNGFNIVQWACMLLRQGRAKE 1100          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 203.371 bits (516), Expect = 1.304e-51
Identity = 112/258 (43.41%), Postives = 162/258 (62.79%), Query Frame = 1
Query:   52 LPYSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEG-FDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALH-ERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED-EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQRE-------IIDPNCEG 795
            L + S+D+   LE L +++IIG GG G VY+ +M +    A+KR+     G  D  F  E++ LG I+HR++V L GY  +  + LL+Y+++P GSL E LH  +   L W+ R  + + AAKGL YLHHDCSP I+HRD+KS+NILLD + EA V+DFGLAK L D   S   + +AG++GY+APEY  + +  EK+DVYSFGV++LE+++GK+P       +G++IV W+     E  Q         I+DP   G
Sbjct:  681 LDFKSEDV---LECLKEENIIGKGGAGIVYRGSMPNNVDVAIKRLVGRGTGRSDHGFTAEIQTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLHGSKGGHLQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGE--FGEGVDIVRWVRNTEEEITQPSDAAIVVAIVDPRLTG 933          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.703e-51
Identity = 103/229 (44.98%), Postives = 157/229 (68.56%), Query Frame = 1
Query:   85 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRI--DKLNEGFDR-------FFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHER-SEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE-SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWL 738
            +  L + ++IG G  G VY+  +D+G V A+K++    +N G D         F  E++ LG+I+H+ +V   G C +  ++LL+YD++P GSL   LHER    LDWD R  I++GAA+GLAYLHHDC P I+HRDIK++NIL+  + E  ++DFGLAKL+++ +    +  VAG++GY+APEY  S + TEK+DVYS+GV+VLEVL+GK+P D + + +G+++V W+
Sbjct:  783 IRCLVEPNVIGKGCSGVVYRADVDNGEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGSSLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPT-VPEGIHLVDWV 1010          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.703e-51
Identity = 112/284 (39.44%), Postives = 173/284 (60.92%), Query Frame = 1
Query:   28 SIVMFHGDLPYSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRI----------DKLNEGF-----DRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHE-RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL--LEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALL 825
            +++ FH  L +S  +I   LE+LD+D++IG+G  G VYK+ + +G   A+KR+              +G+     D  FE E+E LG I+H+ +V L   C++   KLL+Y+++P GSL + LH  +   L W  R  II+ AA+GL+YLHHD  P I+HRDIKS+NIL+DG+  ARV+DFG+AK   L  +     +++AG+ GY+APEY  + R  EK+D+YSFGV++LE+++ KRP D    EK  ++V W+   + +     +IDP  +    E +  +L
Sbjct:  658 TLMSFH-KLGFSEHEI---LESLDEDNVIGAGASGKVYKVVLTNGETVAVKRLWTGSVKETGDCDPEKGYKPGVQDEAFEAEVETLGKIRHKNIVKLWCCCSTRDCKLLVYEYMPNGSLGDLLHSSKGGMLGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVAKAVDLTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVDPELGEK--DLVKWVCSTLDQKGIEHVIDPKLDSCFKEEISKIL 935          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.794e-51
Identity = 112/253 (44.27%), Postives = 162/253 (64.03%), Query Frame = 1
Query:   58 YSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLN--EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQ----LDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE-----DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 783
            ++ ++I K       D++IG+GGFG V+K  ++DG + A+KR  KLN  +G D+    E+ IL  + HR LV L G C      LLIY+F+P G+L E LH  S++    L W  RL I    A+GLAYLH    P I HRD+KSSNILLD  L A+VSDFGL++L++     + ESHI T   GT GYL PEY ++ + T+K+DVYSFGV++LE+++ K+  D +  E+ +N+V ++N ++ ++R  E IDP
Sbjct:  351 FTGREITKATNNFSKDNLIGTGGFGEVFKAVLEDGTITAIKRA-KLNNTKGTDQILN-EVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVMYINKMMDQERLTECIDP 601          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.794e-51
Identity = 111/260 (42.69%), Postives = 165/260 (63.46%), Query Frame = 1
Query:   85 LETLDDDHIIGSGGFGTVYKLAMDDGNVFALKR-----IDKLNE-----GFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSE--QLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEE-SHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALL 825
            L+ L + ++IG G  G VYK  M +  V A+K+     +  LNE     G    F  E++ LGSI+H+ +V   G C +  ++LL+YD++  GSL   LHERS    L W+ R  II+GAA+GLAYLHHDC P I+HRDIK++NIL+  + E  + DFGLAKL++D + +  +  +AG++GY+APEY  S + TEK+DVYS+GV+VLEVL+GK+P D + I  GL+IV W    + + R  ++ID   +      ++ ++
Sbjct:  782 LKCLVEGNVIGKGCSGIVYKAEMPNREVIAVKKLWPVTVPNLNEKTKSSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLGSLLHERSGVCSLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPT-IPDGLHIVDW----VKKIRDIQVIDQGLQARPESEVEEMM 1036          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.955e-51
Identity = 104/227 (45.81%), Postives = 151/227 (66.52%), Query Frame = 1
Query:  109 IIGSGGFGTVYKLAMDDGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTD--ASFIEKGLNIVGWLNFLISEDRQREIID 780
            I+G+GGFG VY+    DG V A+KR+  +N    +  F  ELE++    HR L+ L GYC S + +LL+Y ++  GS+   L  +   LDW+ R  I +GAA+GL YLH  C P+IIHRD+K++NILLD   EA V DFGLAKLL  E+SH+TT V GT G++APEY+ +G+++EKTDV+ FG+L+LE+++G R  +   S  +KG  ++ W+  L  E +  E++D
Sbjct:  304 ILGAGGFGNVYRGKFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLKAKPA-LDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGA-MLEWVRKLHKEMKVEELVD 528          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.452e-51
Identity = 106/251 (42.23%), Postives = 157/251 (62.55%), Query Frame = 1
Query:   52 LPYSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHE--RSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIV--GWLNFLISEDRQREIIDPNCE 792
            L +    + K   + D+ + +G GGFGTVYK  + DG   A+KR+   N      F  E+ ++ +++H+ LV L G   S    LL+Y++L   SLD  + +  R + LDW  R  II+G A+GL YLH   S +IIHRDIK+SNILLD  L+A+++DFGLA+  +D++SHI+T +AGT GY+APEY+  G+ TE  DVYSFGVLVLE+++GK+ T +   +   +++   W +F   E    +I DPN +
Sbjct:  311 LNFKYSTLEKATGSFDNANKLGQGGFGTVYKGVLPDGRDIAVKRLFFNNRHRATDFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTKSKMSDYSDSLITEAWKHFQSGE--LEKIYDPNLD 559          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.104e-50
Identity = 104/246 (42.28%), Postives = 154/246 (62.60%), Query Frame = 1
Query:   58 YSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQ---LDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPN 786
            ++ K I +     D ++ IG GGFG VYK  + DG   A+K++   ++  +R F  E+ ++ +++H  LV L G C      LL+Y++L   SL  AL    +Q   LDW  R  I +G AKGLAYLH +   +I+HRDIK++N+LLD +L A++SDFGLAKL +DE +HI+T +AGT GY+APEY   G  T+K DVYSFGV+ LE++SGK  T+    E+ + ++ W   L  +    E++DP+
Sbjct:  657 FTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGSLLELVDPD 902          
The following BLAST results are available for this feature:
BLAST of CV884944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1677_ARATH5.853e-5247.79Probable LRR receptor-like serine/threonine-protei... [more]
RPK2_ARATH9.984e-5243.39LRR receptor-like serine/threonine-protein kinase ... [more]
CLV1_ARATH1.304e-5143.41Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
RCH2_ARATH1.703e-5144.98Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
HSL1_ARATH1.703e-5139.44Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
WAKLQ_ARATH3.794e-5144.27Wall-associated receptor kinase-like 20 OS=Arabido... [more]
RCH1_ARATH3.794e-5142.69LRR receptor-like serine/threonine-protein kinase ... [more]
Y2239_ARATH4.955e-5145.81Probable LRR receptor-like serine/threonine-protei... [more]
CRK2_ARATH8.452e-5142.23Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
Y5343_ARATH1.104e-5042.28Probable LRR receptor-like serine/threonine-protei... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_011E08_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884944 ID=CV884944; Name=CV884944; organism=Citrus sinensis; type=EST; length=826bp
CTTGCAAGAGATGTTGGTGGAGGTGCATCAATTGTTATGTTTCATGGAGA
CTTGCCATATTCTTCAAAAGACATCATAAAAAAATTGGAAACTTTGGATG
ATGATCACATAATAGGATCTGGGGGCTTTGGAACTGTTTACAAATTAGCA
ATGGATGATGGAAACGTATTTGCTTTGAAAAGAATTGATAAGTTGAATGA
GGGCTTTGATCGGTTTTTTGAAAGGGAGCTTGAAATTCTTGGAAGCATAA
AACACCGGTATTTGGTGAATTTGCGAGGATACTGCAACTCACCTACATCA
AAATTGTTAATATATGACTTTCTACCTGGTGGCAGCCTTGATGAAGCTCT
TCATGAAAGATCTGAGCAGTTAGATTGGGATGCACGGTTAAATATTATAA
TGGGAGCAGCAAAAGGACTGGCCTATTTGCATCATGACTGTTCTCCTAGA
ATCATACACCGTGACATCAAATCCAGCAACATTTTGCTTGATGGAAATTT
GGAGGCTCGAGTATCTGATTTTGGACTTGCTAAACTTTTAGAAGATGAAG
AATCTCACATTACAACCATTGTTGCAGGAACATTTGGTTACTTGGCTCCA
GAGTACATGCAAAGTGGTAGAGCTACAGAAAAGACTGATGTTTACAGCTT
TGGGGTCTTGGTGCTTGAAGTTTTAAGTGGAAAGCGGCCTACTGATGCAT
CTTTTATTGAGAAAGGCCTCAATATTGTTGGTTGGTTGAATTTCCTAATA
TCGGAGGATAGGCAACGAGAGATCATTGATCCAAATTGTGAAGGGGTTCA
GTCTGAAAGTCTTGATGCCCTTCTTG
back to top