CV884944

Overview
NameCV884944
Unique NameCV884944
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV884944_ssr727 microsatellite CV884944_ssr727:727..738. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig3378 contig Csv1_Contig3378:1..826. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 7.404e-47
Identity = 99/233 (42.49%), Postives = 148/233 (63.52%), Query Frame = 1
Query:  109 IIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQ---LDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE-ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 795
            +IG GGFG+VY+  +DDG   A+K     +    R F+ EL +L +I+H  LV L GYCN    ++L+Y F+  GSL + L+  + +   LDW  RL+I +GAA+GLAYLH      +IHRD+KSSNILLD ++ A+V+DFG +K    E +S+++  V GT GYL PEY ++ + +EK+DV+SFGV++LE++SG+ P +        ++V W    I   +  EI+DP  +G
Sbjct:  601 LIGEGGFGSVYRGTLDDGQEVAVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGIKG 833          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.263e-46
Identity = 99/233 (42.49%), Postives = 148/233 (63.52%), Query Frame = 1
Query:  109 IIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALH---ERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE-ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 795
            +IG GGFG+VY+  +DDG   A+K     +    R F+ EL +L +I+H  LV L GYCN    ++L+Y F+  GSL + L+    + + LDW  RL+I +GAA+GLAYLH      +IHRD+KSSNILLD ++ A+V+DFG +K    E +S+++  V GT GYL PEY ++ + +EK+DV+SFGV++LE++SG+ P +        ++V W    I   +  EI+DP  +G
Sbjct:  600 LIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEIVDPGIKG 832          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.263e-46
Identity = 103/259 (39.77%), Postives = 158/259 (61.00%), Query Frame = 1
Query:   58 YSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMD----------DGNVFALKRIDKLN-EGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL-LEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLN-FLISEDRQREIIDPNCEG 795
            Y+  D+    +    D ++G GGFG VY+  +D           G + A+KR++  + +GF  +   E+  LG + HR LV L GYC      LL+Y+F+P GSL+  L  R++   WD R+ I++GAA+GLA+L H     +I+RD K+SNILLD N +A++SDFGLAKL   DE+SH+TT + GT+GY APEYM +G    K+DV++FGV++LE+++G    +        ++V WL   L ++ R ++I+D   +G
Sbjct:   74 YNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGFAEW-RSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLFRRNDPFPWDLRIKIVIGAARGLAFL-HSLQREVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLVDWLRPELSNKHRVKQIMDKGIKG 330          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.650e-46
Identity = 99/244 (40.57%), Postives = 152/244 (62.30%), Query Frame = 1
Query:   91 TLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSE-QLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKL-LEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG-VQSESL 813
            + D++  IG GGFG VYK  + DG   A+KR +  ++     F  E+E+L   +HR+LV+L GYC+     +L+Y+++  G+L   L+      L W  RL I +G+A+GL YLH   +  +IHRD+KS+NILLD NL A+V+DFGL+K   E +++H++T V G+FGYL PEY +  + TEK+DVYSFGV++ EVL  +   D +   + +N+  W      + +   IIDP+  G ++ +SL
Sbjct:  481 SFDENRAIGVGGFGKVYKGELHDGTKVAVKRANPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLYGSGLLSLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVIDPTLTREMVNLAEWAMKWQKKGQLEHIIDPSLRGKIRPDSL 724          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.650e-46
Identity = 96/244 (39.34%), Postives = 147/244 (60.25%), Query Frame = 1
Query:   67 KDIIKKLETLDDDHIIGSGGFGTVYKLAM-DDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQ----LDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP 783
            +D+ K  E   ++ ++G+GGFG VY+  +    +  A+K+I   +    R F  E+E LG ++H+ LVNL+G+C      LLIYD++P GSLD  L+ +  +    L W+AR  I  G A GL YLH +    +IHRD+K SN+L+D ++  R+ DFGLA+L E      TT+V GT GY+APE  ++G ++  +DV++FGVL+LE++SG++PTD+        I  W+  L +       IDP
Sbjct:  354 RDLYKATEGFKENRVVGTGGFGIVYRGNIRSSSDQIAVKKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKPTDSG----TFFIADWVMELQASGEILSAIDP 593          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.650e-46
Identity = 98/249 (39.36%), Postives = 155/249 (62.25%), Query Frame = 1
Query:   79 KKLETLDDDHI----IGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSE--QLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLE-DEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDP----NCE 792
            + ++T  DD +    IG GGFG VYK  + DG   A+KR+ K +   +  F+ E+ ++  ++HR LV L G+C     ++L+Y+++P  SLD  L + ++  QLDW  R  II G A+G+ YLH D    IIHRD+K+SNILLD ++  +++DFG+A++   D+    T+ + GT+GY++PEY   G+ + K+DVYSFGVLVLE++SGK+ +     +   ++V +   L S  R  E++DP    NC+
Sbjct:  328 RTIQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKKGQLDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISGKKNSSFYQTDGAHDLVSYAWGLWSNGRPLELVDPAIVENCQ 576          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 2.154e-46
Identity = 102/250 (40.80%), Postives = 153/250 (61.20%), Query Frame = 1
Query:   52 LPYSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQ--LDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITT-IVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFI---EKGLNIVGWLNFLISEDRQREIIDP 783
            L +S K I    +   D ++IG GGFG VY+  +  G   A+KR+ K +      F+ E  ++  ++H+ LV L G+C     K+L+Y+F+P  SLD  L + ++Q  LDW  R NII G A+G+ YLH D    IIHRD+K+SNILLD ++  +++DFG+A++   ++S   T  +AGTFGY++PEY   G  + K+DVYSFGVLVLE++SGK+  ++SF    + G N+V     L       E++DP
Sbjct:  331 LQFSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAKQGELDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEIISGKK--NSSFYNIDDSGSNLVTHAWRLWRNGSPLELVDP 578          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 2.814e-46
Identity = 96/244 (39.34%), Postives = 152/244 (62.30%), Query Frame = 1
Query:  109 IIGSGGFGTVYKLAMDDGNVFALKRIDKLNEG-------------FDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALH-ERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL-EDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 795
            +IG GGFG VY  +++DG   A+K I+  + G               + F+ E E+L ++ HR L +  GYC+   S  LIY+++  G+L + L  E +E L W+ RL+I + +A+GL YLHH C P I+HRD+K++NILL+ NLEA+++DFGL+K+  ED+ SH+ T V GT GY+ PEY  + +  EK+DVYSFG+++LE+++GKR    +   + +N+V ++   +       ++DP   G
Sbjct:  572 VIGKGGFGIVYLGSLEDGTEIAVKMINDSSFGKSKGSSSSSSSSQVSKEFQVEAELLLTVHHRNLASFVGYCDDGRSMALIYEYMANGNLQDYLSSENAEDLSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSIMKTDDGEKMNVVHYVEPFLKMGDIDGVVDPRLHG 815          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.675e-46
Identity = 99/254 (38.98%), Postives = 154/254 (60.63%), Query Frame = 1
Query:   58 YSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG-VQSESL 813
            +S  ++ +  +  D   IIG GGFG VY   +DDG   A+KR +  +E     F  E+++L  ++HR+LV+L GYC+     +L+Y+++  G   + L+ ++   L W  RL I +GAA+GL YLH   +  IIHRD+KS+NILLD  L A+V+DFGL+K +   ++H++T V G+FGYL PEY +  + T+K+DVYSFGV++LE L  +   +     + +N+  W      +    +IIDP+  G V  ES+
Sbjct:  513 FSLSELQEVTKNFDASEIIGVGGFGNVYIGTIDDGTQVAIKRGNPQSEQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLYGKNLSPLTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAMLWKQKGLLEKIIDPHLVGAVNPESM 766          
BLAST of CV884944 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.799e-46
Identity = 100/258 (38.76%), Postives = 154/258 (59.69%), Query Frame = 1
Query:   28 SIVMFHGDLPYSSKDIIKKLETLDDDHIIGSGGFGTVYKLAMDDGNVFALKRIDKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERS-EQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLED-EESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEG 795
            S+   H    +  ++I+      D+  ++G GGFG VYK  ++DG   A+KR +  +E     F  E+E+L  ++HR+LV+L GYC+  +  +L+Y+++  G L   L+      L W  RL I +GAA+GL YLH   S  IIHRD+K++NILLD NL A+V+DFGL+K     +++H++T V G+FGYL PEY +  + TEK+DVYSFGV+++EVL  +   +     + +NI  W      +    +I+D N  G
Sbjct:  488 SLASTHLGRCFMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAEWAMAWQKKGLLDQIMDSNLTG 745          
The following BLAST results are available for this feature:
BLAST of CV884944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NORK_MEDTR7.404e-4742.49Nodulation receptor kinase OS=Medicago truncatula ... [more]
NORK_PEA1.263e-4642.49Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
CX32_ARATH1.263e-4639.77Probable serine/threonine-protein kinase Cx32, chl... [more]
Y5597_ARATH1.650e-4640.57Probable receptor-like protein kinase At5g59700 OS... [more]
LRKA3_ARATH1.650e-4639.34Lectin-domain containing receptor kinase A4.3 OS=A... [more]
CRK10_ARATH1.650e-4639.36Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
CRK35_ARATH2.154e-4640.80Putative cysteine-rich receptor-like protein kinas... [more]
Y4291_ARATH2.814e-4639.34Probable LRR receptor-like serine/threonine-protei... [more]
Y2214_ARATH3.675e-4638.98Probable receptor-like protein kinase At2g21480 OS... [more]
THE1_ARATH4.799e-4638.76Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011E08_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884944 ID=CV884944; Name=CV884944; organism=Citrus sinensis; type=EST; length=826bp
CTTGCAAGAGATGTTGGTGGAGGTGCATCAATTGTTATGTTTCATGGAGA
CTTGCCATATTCTTCAAAAGACATCATAAAAAAATTGGAAACTTTGGATG
ATGATCACATAATAGGATCTGGGGGCTTTGGAACTGTTTACAAATTAGCA
ATGGATGATGGAAACGTATTTGCTTTGAAAAGAATTGATAAGTTGAATGA
GGGCTTTGATCGGTTTTTTGAAAGGGAGCTTGAAATTCTTGGAAGCATAA
AACACCGGTATTTGGTGAATTTGCGAGGATACTGCAACTCACCTACATCA
AAATTGTTAATATATGACTTTCTACCTGGTGGCAGCCTTGATGAAGCTCT
TCATGAAAGATCTGAGCAGTTAGATTGGGATGCACGGTTAAATATTATAA
TGGGAGCAGCAAAAGGACTGGCCTATTTGCATCATGACTGTTCTCCTAGA
ATCATACACCGTGACATCAAATCCAGCAACATTTTGCTTGATGGAAATTT
GGAGGCTCGAGTATCTGATTTTGGACTTGCTAAACTTTTAGAAGATGAAG
AATCTCACATTACAACCATTGTTGCAGGAACATTTGGTTACTTGGCTCCA
GAGTACATGCAAAGTGGTAGAGCTACAGAAAAGACTGATGTTTACAGCTT
TGGGGTCTTGGTGCTTGAAGTTTTAAGTGGAAAGCGGCCTACTGATGCAT
CTTTTATTGAGAAAGGCCTCAATATTGTTGGTTGGTTGAATTTCCTAATA
TCGGAGGATAGGCAACGAGAGATCATTGATCCAAATTGTGAAGGGGTTCA
GTCTGAAAGTCTTGATGCCCTTCTTG
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