CV884941

Overview
NameCV884941
Unique NameCV884941
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length966
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12567 contig Csv1_Contig12567:590..1555. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884941 vs. ExPASy Swiss-Prot
Match: THI4_META3 (Putative thiazole biosynthetic enzyme OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_0798 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.458e-15
Identity = 46/139 (33.09%), Postives = 76/139 (54.68%), Query Frame = -2
Query:  444 KLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 860
            K+   +  ED+I+K G+V GVV N   ++        +DP  + AK V+ + GHD     T  ++ + +G++  +PG K+L  +  E+ +++ T+E+ PG+ V GM      G  RMG  FG M ISG+  A + L+ L
Sbjct:  127 KVLTGIVVEDVILKEGKVSGVVINSYAINK---AGLHIDPLTINAKYVIDATGHDASVACTLARKNEDLGLV--IPGEKSLWADEGENGLLKYTKELFPGLFVCGMASNATHGGYRMGAVFGGMYISGKIVADMILEKL 260          
BLAST of CV884941 vs. ExPASy Swiss-Prot
Match: THI4_METM7 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0597 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.247e-15
Identity = 59/180 (32.78%), Postives = 86/180 (47.78%), Query Frame = -2
Query:  444 ELGIDYDEQDNYVVIKHAALFTST---IMSKL---LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 965
            E GI  DE D         LFT+    + +KL         K+   +  EDLI+K  ++ GVV     +         +DP  + AK V+ S GHD     T  ++ K +G+  EVPG K++     E+++ R TRE+ PG+ V GM         RMG  FG M +SG+K A + L+ L
Sbjct:   90 EAGIKLDEVDG-----EDELFTADSVEVPAKLGVAAIDAGAKILTGIVVEDLILKEDKIAGVVIQSYAIEK---AGLHIDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAEMILEKL 259          
BLAST of CV884941 vs. ExPASy Swiss-Prot
Match: THI4_DESOH (Putative thiazole biosynthetic enzyme OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=Dole_2426 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.247e-15
Identity = 56/176 (31.82%), Postives = 86/176 (48.86%), Query Frame = -2
Query:  444 ELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIE--EVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 965
            E+G     +D Y      A+ T T  +   A+  V +FN V  ED++++  R+ G+V NW+ V M       +DP  M A  V+ + GH         K++      +  ++ G K++  + AE   +  TREV PG+ V GM      G PRMG  FG M++SG+K A   L+ L
Sbjct:   88 EIGYRLYAEDYYTADAVEAISTLTSQA---AKAGVAIFNCVTVEDVMIRPDRIVGLVLNWSPVEM---AGLHVDPLAMRASFVIDATGHATEVVHVVAKKVPGTLRTDSGKIEGEKSMWSDRAESLTLENTREVYPGLYVAGMAGNATFGGPRMGAIFGGMLLSGEKVAAEILERL 257          
BLAST of CV884941 vs. ExPASy Swiss-Prot
Match: THI4_PYRIL (Putative thiazole biosynthetic enzyme OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=Pisl_1998 PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 4.241e-15
Identity = 49/141 (34.75%), Postives = 77/141 (54.61%), Query Frame = -2
Query:  444 KLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 860
            K+   V  +D+I +G   RV G++  W  + M+    S +DP   +AK V+ + GHD    +   +++  +G+  EV G K+     +E  +V  T  V PG+ V GM V  + G PRMGP FG M++SG++AA +  K L
Sbjct:  117 KIILGVHVDDVIFRGDPPRVVGLLWVWTPIQMSG---SHVDPLYTQAKAVLDATGHDAEVISIAARKVPELGI--EVRGEKSAWAEVSEKLVVEHTGRVAPGLYVAGMAVCTVHGLPRMGPIFGGMLLSGRRAAEIIHKDL 252          
BLAST of CV884941 vs. ExPASy Swiss-Prot
Match: THI4_METM6 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_1321 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.241e-15
Identity = 58/180 (32.22%), Postives = 86/180 (47.78%), Query Frame = -2
Query:  444 ELGIDYDEQDNYVVIKHAALFTST---IMSKL---LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 965
            E GI  DE D         LFT+    + +KL         K+   +  EDLI+K  ++ GVV     +         +DP  + AK V+ S GHD     T  ++ K +G+  EVPG K++     E+++ R TRE+ PG+ V GM         RMG  FG M +SG+K A + L+ +
Sbjct:   90 EAGIKLDEVDG-----EEELFTADSVEVPAKLGVAAIDAGAKILTGIVVEDLILKEDKIAGVVIQSYAIEK---AGLHIDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAEMILEKM 259          
BLAST of CV884941 vs. ExPASy Swiss-Prot
Match: THI4_HALSA (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarium GN=VNG_2604G PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.241e-15
Identity = 57/200 (28.50%), Postives = 99/200 (49.50%), Query Frame = -2
Query:  444 ELGI--DYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD----------GPFGATGVKRLK--SIGMIE-----------EVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 965
            +LG+  +YDE+++ + +  A    S +++        ++ N     D++V+    V G V NW  V       +C+DP  +EA VVV + GHD          G   A G++ ++  + GM +           + PG  ++ +  +ED +V  T +V  G++  G+  A + G  RMGPTFGAM++SG+ AA+  +  L
Sbjct:   92 DLGVPYEYDEENDGLAVADAPHACSAMITAA-CDAGARIQNMTEFTDIVVRDDHAVAGAVVNWTPVHSLPRELTCVDPIALEADVVVDATGHDAVVVSKLHERGVLEADGIEHVEEHATGMDQSGDGEYGAPGHDSPGHDSMWVADSEDKVVEQTGKVHDGLVTAGLSTATVHGLTRMGPTFGAMLLSGKVAANAVMDEL 290          
BLAST of CV884941 vs. ExPASy Swiss-Prot
Match: THI4_HALS3 (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE4651F PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.241e-15
Identity = 57/200 (28.50%), Postives = 99/200 (49.50%), Query Frame = -2
Query:  444 ELGI--DYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD----------GPFGATGVKRLK--SIGMIE-----------EVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 965
            +LG+  +YDE+++ + +  A    S +++        ++ N     D++V+    V G V NW  V       +C+DP  +EA VVV + GHD          G   A G++ ++  + GM +           + PG  ++ +  +ED +V  T +V  G++  G+  A + G  RMGPTFGAM++SG+ AA+  +  L
Sbjct:   92 DLGVPYEYDEENDGLAVADAPHACSAMITAA-CDAGARIQNMTEFTDIVVRDDHAVAGAVVNWTPVHSLPRELTCVDPIALEADVVVDATGHDAVVVSKLHERGVLEADGIEHVEEHATGMDQSGDGEYGAPGHDSPGHDSMWVADSEDKVVEQTGKVHDGLVTAGLSTATVHGLTRMGPTFGAMLLSGKVAANAVMDEL 290          
BLAST of CV884941 vs. ExPASy Swiss-Prot
Match: THI4_SULIN (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=YN1551_1140 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.539e-15
Identity = 52/176 (29.55%), Postives = 85/176 (48.30%), Query Frame = -2
Query:  444 ELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 965
            E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  + G K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:   91 EVNVRLKEVEEGVYVVDSAEFMAKLATAAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IAGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CV884941 vs. ExPASy Swiss-Prot
Match: THI4_METM5 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0226 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.539e-15
Identity = 58/180 (32.22%), Postives = 86/180 (47.78%), Query Frame = -2
Query:  444 ELGIDYDEQDNYVVIKHAALFTST---IMSKL---LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 965
            E GI  DE D         LFT+    + +KL         K+   +  EDLI+K  ++ GVV     +         +DP  + AK V+ S GHD     T  ++ K +G+  EVPG K++     E+++ R TRE+ PG+ V GM         RMG  FG M +SG+K A + L+ +
Sbjct:   90 EAGIKLDEVDG-----EDELFTADSVEVPAKLGVAAIDAGAKILTGIVVEDLILKEDKIAGVVIQSYAIEK---AGLHIDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAEMILEKM 259          
BLAST of CV884941 vs. ExPASy Swiss-Prot
Match: THI4_ARCFU (Putative thiazole biosynthetic enzyme OS=Archaeoglobus fulgidus GN=AF_0702 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.234e-14
Identity = 55/179 (30.73%), Postives = 89/179 (49.72%), Query Frame = -2
Query:  444 ELGIDYDEQDNYVVIKHAALFTSTIMSKLLARP---NVKLFNAVAAEDLIVKGGRVG--GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 965
            + GI Y E  N++V   A       M+KL A+      K+ + V+ ED+I +   +G  GV   W+ V ++      +DP  + ++ VV + GHD    +   ++   I +   V G ++     AE  IV  T ++V G+   GM VA +   PRMGP FG M++SG+K A +  + L
Sbjct:   91 DFGIRYTEHRNFLVADSAEF-----MAKLAAKAIDAGAKIIHGVSVEDVIFRDDPLGVRGVCIQWSAVEISG---LHVDPLFLRSRAVVDATGHDAEVISVAARK---IPLEVSVVGERSAYSEVAEREIVEKTGKIVKGLYAAGMAVAAVHNLPRMGPIFGGMLLSGKKVAEIVAEDL 258          
The following BLAST results are available for this feature:
BLAST of CV884941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
THI4_META31.458e-1533.09Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_METM73.247e-1532.78Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_DESOH3.247e-1531.82Putative thiazole biosynthetic enzyme OS=Desulfoco... [more]
THI4_PYRIL4.241e-1534.75Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_METM64.241e-1532.22Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_HALSA4.241e-1528.50Putative thiazole biosynthetic enzyme OS=Halobacte... [more]
THI4_HALS34.241e-1528.50Putative thiazole biosynthetic enzyme OS=Halobacte... [more]
THI4_SULIN5.539e-1529.55Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METM55.539e-1532.22Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_ARCFU1.234e-1430.73Putative thiazole biosynthetic enzyme OS=Archaeogl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011E06_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884941 ID=CV884941; Name=CV884941; organism=Citrus sinensis; type=EST; length=966bp
ATCAGCACTTTCCCATTGGCTGATGCCTCAAGTTATAAACATACAAAGCA
AAGAAAAGGGAACAGCCCAAGGGCAGTCTTACACATAACACAGATAACAA
GGACTAGATACGCAACTGCAAATTCACCTCCGAAAAACTCACAACGGTTT
CTTACAAGAGGAGAAAGAAATTAAAATTAAAGGTTCCATGATGGACCGGA
AACAAACACTTTATTCACAAAACCTCACAACATTATCTCATTATTCGCAT
CAACCATCCATCACAACCACCTAAATACAACTACTTTTTTGCCAGAGTTT
ATTTGCATGCACACAGCTGATGAGTGATGATGCCTGTTATTACCAAATTA
AGCATCAGCAGTCTCAGCAGAATCAGCTGCAGCTAAGATCAGCTCAGGGT
GAACGCCTCCCACATATGTACCGTCTAATGCATTCGGCTGGCCCAGTGAC
TTCAACGCCAAATGCGCAGCCTTCTGCCCCGATATCATCATTGCTCCAAA
TGTTGGCCCCATTCGAGGAGCACCATCAATCTCGGCAACTTCCATGCCGG
TAACTATCATACCAGGCACAACCTCCCTGGTCAGCCTCACAATAGCATCT
TCTGCAGAGTTCATGTCCAGTGCCTTCATTCCAGGCACTTCCTCAATCAT
TCCGATACTCTTCAACCTCTTTACTCCAGTGGCCCCAAAAGGCCCATCAT
GGCCACAAGAGCTCACAACCACCTTCGCTTCCATTACATTGGGATCCATG
CAAGACTGTGTATCGTGATTCATTGACACCAACGCCCAGTTGGTCACCAC
ACCACCAACTCTGCCGCCTTTGACTATCAAGTCCTCGGCTGCCACTGCAT
TAAAGAGCTTGACGTTGGGGCGGGCCAGGAGCTTGCTCATTATAGTGGAG
GTGAACAGCGCTGCATGCTTGATCACAACATAGTTGTCTTGCTCATCGTA
GTCGATGCCAAGCTCG
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