CV884939

Overview
NameCV884939
Unique NameCV884939
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length978
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884939 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.748e-38
Identity = 108/265 (40.75%), Postives = 138/265 (52.08%), Query Frame = -3
Query:  185 CFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNS 976
            CFVDGCDA +LL+ T T   E+ AA NNNS RGF VI+  K  V+   P + VSCADIL+IAA  S     G ++ V LGR+D+RTAN   AN  L GP + L    + F   G N   ++VAL G+HT G A+C      +  F N  +         +  L   C    N   L   D  TP  +D +YFS++   +GLL SD EL    G  T A V  +     AF  +F  +M++M NL P  G   EIR  C RVN NS
Sbjct:  101 CFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIAARDSFEKFSGSTYTVTLGRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFNG-TEMVALLGSHTIGFARCPLL--CISTFINPAR---------VSTLNCNCSGTVNATGLVGLD-PTPTTWDQRYFSDVVNDQGLLFSDNELLK--GNTTNAAVRRYRDAMGAFLTDFAAAMVKMSNLPPSPGVALEIRDVCSRVNANS 350          
BLAST of CV884939 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 4.019e-37
Identity = 100/264 (37.88%), Postives = 134/264 (50.76%), Query Frame = -3
Query:  194 CFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGR--LYDFNNTGKPDPTLDATFLQQLRKLCPQG-GNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 976
            CFV GCD S+L+    T  S+    P N S  GF VI+++K  +E  CP  VSCADIL +AA  +V   GGP   +P GRRD R +  A    N+     T+D++ + F + GL+   DLV LSGAHT G A C  F  R  L    N    D +LD ++ Q L   C         + + D  T   FDN+Y+ NL   KGL Q+D  L       T  IVE    +Q +FF  +  S ++M  +    G +GEIR +C  VN
Sbjct:   73 CFVQGCDGSVLIRGNGTERSD----PGNASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVH-DLVVLSGAHTIGAAHCNTFNSRFKLDPKGNLELIDASLDNSYAQTLVNKCSSSLDPTTTVVDNDPETSSTFDNQYYKNLLAHKGLFQTDSALMEDD--RTRKIVEILANDQESFFDRWTESFLKMSLMGVRVGEEGEIRRSCSAVN 329          
BLAST of CV884939 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.249e-37
Identity = 97/263 (36.88%), Postives = 143/263 (54.37%), Query Frame = -3
Query:  194 CFVDGCDASILLDSTNTIDSEKFAAPNNN-SARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF-DVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 976
            C VDGCDASIL+ ST    SE+ A  N +     F+VI  +K AVE  CP +VSC+DIL  A    +++ GGP   V  GR+DS  ++       L  P  T+D + S F + GL  + ++VAL GAHT G + C+ F  R+++ ++   P   ++  +  +LRKLC    N   ++ F DV TP  FDN Y+ NL+   GLLQSD  +       T ++V+ +  ++ AFF  F  +M ++      TG  GE+R  C + N
Sbjct:   64 CMVDGCDASILVASTPRKTSERDADINRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVKFGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQ-EMVALVGAHTIGFSHCKEFASRIFNKSDQNGP-VEMNPKYAAELRKLCANYTNDEQMSAFNDVFTPGKFDNMYYKNLKHGYGLLQSDHAI--AFDNRTRSLVDLYAEDETAFFDAFAKAMEKVSEKNVKTGKLGEVRRRCDQYN 322          
BLAST of CV884939 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 7.580e-36
Identity = 96/269 (35.69%), Postives = 143/269 (53.16%), Query Frame = -3
Query:  179 CFVDGCDASILLDSTNTIDSEKFAAPNNNSARG--FEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF-DVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNSNI 976
            CF++GCDAS+L+ +TN+ +  +     N+S  G  F+++  +K A+E +CP VVSCADIL  A    V + GGP + V LGR+D   +       N+P    T+ ++   F+  G + + ++VALSGAHT G + C+ F  RLY      + D  ++  F   L+ LC        +A F DV TP  FDN YF NL+   GLL SD  L       T   V+ +  N+ AFF++F  +M ++G +       GE+R  C   N N N+
Sbjct:   75 CFLEGCDASVLI-ATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLR-EMVALSGAHTIGFSHCKEFSDRLYG----SRADKEINPRFAAALKDLCKNHTVDDTIAAFNDVMTPGKFDNMYFKNLKRGLGLLASDHILIK--DNSTKPFVDLYATNETAFFEDFARAMEKLGTVGVKGDKDGEVRRRCDHFN-NLNV 334          
BLAST of CV884939 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.900e-36
Identity = 96/265 (36.23%), Postives = 138/265 (52.08%), Query Frame = -3
Query:  194 CFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPS-WAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQ---GGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 976
            C V  CDAS+LL++   ++SE+  +  +   R F+ +  +K A+E+ CP  VSCADI+ ++A   + +  GP    +  GRRDSR +        +P   D+L  + S+F ++G+ D    VAL GAH+ GR  C     RLY        DPTLD ++   L+K CP      N  + +  D  TP V DN Y+ N+   KGLL  D EL + P   TA  V     + N F + F   +  +    PLTG+QGEIR +CR VN
Sbjct:   72 CVVKSCDASLLLETARGVESEQ-KSKRSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGI-DVEATVALLGAHSVGRVHCVNLVHRLYP-----TIDPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKNIMAHKGLLVIDDELATDP--RTAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRKDCRYVN 327          
BLAST of CV884939 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 1.581e-33
Identity = 92/266 (34.59%), Postives = 132/266 (49.62%), Query Frame = -3
Query:  188 CFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF---DVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGN 976
            C V+ CDAS+LLDST     EK     +   R F  I+ +K A+ER CP VVSC+DIL ++A   +   GGP   +  GRRD   +   +    LP   +++  +   F+++G+ D   LVAL G+H+ GR  C     RLY      + DP+L+   +  +   CP          +   D  TP V DN Y+ N+   KGLL  D +L       T  IV+   ++Q  FFK F  ++  +    PLTG++GEIR  C   N N
Sbjct:   73 CAVESCDASLLLDSTRRELGEK-EHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGI-DTPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPSLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQL--AHDKRTRPIVKKMAKDQAYFFKEFTRAIQILSENNPLTGSKGEIRKQCNLANKN 329          
BLAST of CV884939 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 4.599e-33
Identity = 89/266 (33.46%), Postives = 138/266 (51.88%), Query Frame = -3
Query:  194 CFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDS-RTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPD----VFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 976
            C V GCDASILL+        +  +  N   R  +++ ++K ++E  CP+ VSC+D++ +AA  +VAL+GGP  +VPLGR+DS  T ++ +A+  LP     +D   S F N G+  + + VA+ GAHT G   C     R   F+N       +D  F   LR  CP+       A       D    +FD  Y+ +    +G L+ D E+ + P   T   VE F  +Q+ FF  F ++ +++ + K LTGN+G IR  C +V+
Sbjct:   80 CQVQGCDASILLEPIRDQQFTELDSAKNFGIRKRDLVGSIKTSLELECPKQVSCSDVIILAARDAVALTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIE-ESVAIMGAHTIGVTHCNNVLSR---FDNANATSENMDPRFQTFLRVACPEFSPTSQAAEATFVPNDQTSVIFDTAYYDDAIAGRGNLRIDSEIGADP--RTRPFVEAFAADQDRFFNAFSSAFVKLSSYKVLTGNEGVIRSVCDKVD 339          
BLAST of CV884939 vs. ExPASy Swiss-Prot
Match: PER2_HORVU (Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.192e-26
Identity = 75/173 (43.35%), Postives = 92/173 (53.18%), Query Frame = -3
Query:  149 LKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLAN-FDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNSNIATRSSSSEGD 664
            L SSF N  L D  DLV+LSGAHTFG A C  F  R    ++  + +P +D  F   LR  C      G L    DV TPDVFDNKY+ +L  R+GL +SDQ L   P   T  +   F  NQ AFF+ F  SM +M N+  LTG +GEIR NC   N     +   S + GD
Sbjct:    3 LISSFANRSL-DVADLVSLSGAHTFGVAHCPAFEDR----SSRVRHNPAIDGKFATALRNKCSGDNPSGTLTQKLDVRTPDVFDNKYYFDLIARQGLFKSDQGLIDHP--TTKRMATRFSLNQGAFFEQFARSMTKMSNMDILTGTKGEIRNNCAVPNRRVRTSRPPSPARGD 168          
BLAST of CV884939 vs. ExPASy Swiss-Prot
Match: PERX_LUPPO (Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 9.288e-26
Identity = 66/167 (39.52%), Postives = 89/167 (53.29%), Query Frame = -3
Query:  194 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGV-LANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 691
            PGP   L  L + F   GL    DL  LSG HT G+++CQFF+ R+Y+       D  +D  F    +  CP    G   LA  D  TP+ FDN Y+ +L   +GLL SDQ LF+    DT  +V  +  N   FF +F  ++++M  + PLTG  GEIR NCR +N
Sbjct:    2 PGPSSDLTTLTTKFAAKGLTPS-DLTVLSGGHTIGQSECQFFKTRIYN-------DTNIDTNFATSRQANCPFSAGGETNLAPLDSLTPNRFDNNYYKDLVSNRGLLHSDQVLFNGGSQDT--LVRTYSTNNVKFFSDFAAAIVKMSKISPLTGIAGEIRKNCRVIN 158          
BLAST of CV884939 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.436e-18
Identity = 58/131 (44.27%), Postives = 77/131 (58.78%), Query Frame = -3
Query:  593 CFVDGCDASILLDSTNTIDSEKFAAPNNN-SARGFEVIDNMKAAVERACP-RVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRT-ANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHT 976
            CFV GCDAS+LLD + T   E+ A PN       F+ I+++   + + C   VVSC+D+L +AA  SV +SGGPS+ VPLGRRDS + A +      LP P   +  L +    + L D  DLVALSG HT
Sbjct:   83 CFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSGLPPPTAAVPALLAVLSKINL-DATDLVALSGGHT 212          
The following BLAST results are available for this feature:
BLAST of CV884939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
PERA_IPOBA4.748e-3840.75Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER18_ARATH4.019e-3737.88Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER6_ARATH5.249e-3736.88Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER65_ARATH7.580e-3635.69Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER21_ARATH9.900e-3636.23Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER42_ARATH1.581e-3334.59Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER29_ARATH4.599e-3333.46Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER2_HORVU3.192e-2643.35Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV... [more]
PERX_LUPPO9.288e-2639.52Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 ... [more]
PER1_SORBI1.436e-1844.27Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011E05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884939 ID=CV884939; Name=CV884939; organism=Citrus sinensis; type=EST; length=978bp
ATTAGATTAAACTCAAGTTTGATCGTTAATTTATTTGAAAGTACATAACA
TGTTTCAGGCAAAACGATCAGATTAAATTTGAGTTTGTTAAGCACAAAAA
CTCTCGCGCATATGCTGCAAGCTAGCTTATTTAGAAAGAGCTGACCAAAT
CACCCTCTGATGATGATGATCTTGTTGCAATATTACTGTTTCCATTGACC
CTCCTGCAGTTCAATCTAATCTCCCCTTGATTTCCTGTCAGTGGTTTCAA
ATTTCCCATTCTTATCATTGAGGTCACAAAGTTTTTAAAGAAAGCATTCT
GGTTCCTCCCAAAGTCCTCGACAATGGCAGCGGTATCGGCACCAGGAGTC
GAAAACAACTCTTGATCACTCTGCAGAAGGCCTTTGCGGCCTCTAAGATT
GGAGAAGTATTTGTTGTCGAAAACATCAGGTGTCGTGACATCAAAATTAG
CAAGAACGCCGCCGTTTCCACCTTGTGGGCATAGTTTCCTCAGTTGTTGT
AAGAAGGTTGCGTCTAGGGTTGGGTCTGGCTTGCCAGTGTTGTTAAAATC
GTATAATCTGCCCCTGAAAAATTGGCACTGAGCCCTTCCGAACGTGTGTG
CTCCGGAGAGTGCAACAAGATCAAGCTTGTCATTGAGGCCAACATTTCTA
AAACTAGATTTGAGCTCATCAAGAGTATCAAATGGTCCTGGAAGATTCTG
ATTTGCAAGAGCTCTGTTTGCCGTTCTGCTGTCTCTTCTTCCCAATGGAA
CTGCCCATGACGGACCCCCTGACAAAGCAACGGATCGTTCAGCCGCAATA
GTAAGAATATCAGCGCAGGAAACAACCCTTGGACATGCCCTTTCAACGGC
AGCTTTCATGTTATCAATAACTTCAAAACCCCTCGCCGAATTGTTATTTG
GCGCAGCAAATTTCTCGCTGTCTATGGTGTTAGTGCTGTCCAGCAAAATC
GATGCATCACACCCATCAACAAAACAGT
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