CV884938

Overview
NameCV884938
Unique NameCV884938
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length828
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV884938 vs. ExPASy Swiss-Prot
Match: PER2_HORVU (Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.473e-15
Identity = 50/108 (46.30%), Postives = 60/108 (55.56%), Query Frame = 2 
Query:  494 LKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLAN-FDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTP 814
            L SSF N  L D  DLV+LSGAHTFG A C  F  R    ++  + +P +D  F   LR  C      G L    DV TPDVFDNKY+ +L  R+GL +SDQ L   P
Sbjct:    3 LISSFANRSL-DVADLVSLSGAHTFGVAHCPAFEDR----SSRVRHNPAIDGKFATALRNKCSGDNPSGTLTQKLDVRTPDVFDNKYYFDLIARQGLFKSDQGLIDHP 105
The following BLAST results are available for this feature:
BLAST of CV884938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER2_HORVU7.473e-1546.30Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011E05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884938 ID=CV884938; Name=CV884938; organism=Citrus sinensis; type=EST; length=828bp
CGCAGCAGCTCTTCTTGTTGCTTTTGTGCTTGAGGGATCACCATCTCAAG
CTCAACTTTCTCCATCTTTTTATTCTTCCACATGCCCTAATGTATTGAAC
ACTATCGAGGATGTGCTTAAGAAAGCTTTCTCGTCCGATATCCGGATCGG
TGCCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTGTG
ATGCATCGATTTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTT
GCTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTATTGATAACAT
GAAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCCTGCGCTGATA
TTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCA
TGGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCT
TGCAAATCAGAATCTTCCAGGACCATTTGATACTCTTGATGAGCTCAAAT
CTAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGATCTTGTTGCACTC
TCCGGAGCACACACGTTCGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAG
ATTATACGATTTTAACAACACTGGCAAGCCAGACCCAACCCTAGACGCAA
CCTTCTTACAACAACTGAGGAAACTATGCCCACAAGGTGGAAACGGCGGC
GTTCTTGCTAATTTTGATGTCACGACACCTGATGTTTTCGACAACAAATA
CTTCTCCAATCTTAGAGGCCGCAAAGGCCTTCTGCAGAGTGATCAAGAGT
TGTTTTCGACTCCTGGTGCCGATACCGC
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